| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781894
Identifier: 91781894
GI number: 91781894
Start: 577235
End: 578653
Strand: Direct
Name: 91781894
Synonym: Bxe_A3951
Alternate gene names: NA
Gene position: 577235-578653 (Clockwise)
Preceding gene: 91781886
Following gene: 91781895
Centisome position: 11.79
GC content: 37.98
Gene sequence:
>1419_bases ATGTCCACCATCAACACCCAGCACAACCCGTCATTTTACAGTGGCAAGACTGCCACGCGCTCACACTACCGCCTTACTAC CAATAGGCATGGGACATACACCCTTCGCCTCGTGGTCCCTAAGTCCCTACAATCGCTTATCCAGACCAAAGAACTGAAGA AAAGTCTGCGTACAAGGGACTTTCAGAAGGCCAGAATGCTAGCAGGGCATCTGTCCTATCAGTTCGACCTCATGCTTGCT ACTCTTATGAAGAAAAAGCTATCTGACTTTAATCTTGATGTTATTAACAACATTCATAAAGATTTGAGTGTTACGTTTAA TAACGTTCAATATGATTTCGATATAAATAACGAATTTGAGCGAGCCGAGTACCTCGACCTTAAGGCTCGCATTGAAAAGC ATCACGCTGATGTGGGTGAAGTGCAGAAGAATGTTGTTGTTGAGTCTTCCGCAACTCAAAATTCGGATAAAAAATATCAA TCAAACTTCAAATTTGTTGAAGTCAAAGATGCTTTTGTAAAAGAAAGAATGATTAAAGCTGGTGGAAAAATGACCAAATC CATTGATATTTATATGGCAAGTATCAATGAGTTTTGGAATAAAATTTTAAGCGGGACCAATCCACCCATTACAGCTATTA ACAAATTAAACGCGCGCTCGTTCAAAGAGCATCTGATTGGAACTGGAATCACTGCCCAAACTGTGGATAACAAAGTTGCT CACCTACAAGCTTTTTTCACATTTATTATCAAAAATTACGACTATCCTTTTAATAACCCATTTGAAGGACTGAAGATATT AAACAGGGCTGAATTGAAAAAAGTCACTAACTCATTCAAGCCCTTCACAATGGATGAGTTAAAAATAATTTTTGATGTTG AGCGCTATAGAGCTTATTACAAGAAAAATATTCAACTCTACTTTGTACCACTGATACAGCTATATAGCAGTATGCGAGTT GAAGAAGCCAGCCAACTGCATTTGGATGACATTAGGCAAGAAAATGGCATTTATTATTTTAATTTAAACGACGATGAAGA TAAGAGCCTAAAGACAATCAATGCCTTCAGGAACATTCCCGTGCATAGTAAATTGATTGAAATTGGTCTCATCAAATACT ATGAAGAAAGAAAAAAATTAGGCAAAAGGACGCTTTTTGATAATCAAGGTGAGTATGTCACAACTGAATTTGGTGCATAT CTCAAAAAGCTTGAAATTAAAAAAACGGCTCGCGTGCATGGTACGCATTCACTCAGGCAAAACTTCAATAACGCACTCAT TGATAAAGATGTGATATCTGATGTGCGTTGTAGGCTGTGCGGTCATGAATTGGTAGGCACAAATGCTACAGTTTATGGAA AAGACTACAAGGTTGAAGAACTGAAGCGCTACATAGAACTTGTGCAATTTCCAATTTAA
Upstream 100 bases:
>100_bases ATCGGGTAAAATCGCATTTTACCCGAAAAGCACTTAAGTAACTGATTTTTAAGCGTATTTTCAGGTAAAACTCGGGACTG GGTAGCCAATTAGGTAGCCA
Downstream 100 bases:
>100_bases GAAAACTGCCACCTTCAATTTATAAGTAAGTAAACACCACTCACTTATAAATTAAAGGGACTTTTCATTGCTGTATGATA ATTATCGCGTAGCAAGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: Integrase; Phage-Related Integrase; Phage Integrase; Phage Integrase Family Protein; Phage Integrase Family Site Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Site-Specific Recombinase; Integrase/Resolvase Recombinase Protein; Phage Integrase Domain/SAM Domain-Containing Protein; Prolidase (Xaa-Pro Dipeptidase
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MSTINTQHNPSFYSGKTATRSHYRLTTNRHGTYTLRLVVPKSLQSLIQTKELKKSLRTRDFQKARMLAGHLSYQFDLMLA TLMKKKLSDFNLDVINNIHKDLSVTFNNVQYDFDINNEFERAEYLDLKARIEKHHADVGEVQKNVVVESSATQNSDKKYQ SNFKFVEVKDAFVKERMIKAGGKMTKSIDIYMASINEFWNKILSGTNPPITAINKLNARSFKEHLIGTGITAQTVDNKVA HLQAFFTFIIKNYDYPFNNPFEGLKILNRAELKKVTNSFKPFTMDELKIIFDVERYRAYYKKNIQLYFVPLIQLYSSMRV EEASQLHLDDIRQENGIYYFNLNDDEDKSLKTINAFRNIPVHSKLIEIGLIKYYEERKKLGKRTLFDNQGEYVTTEFGAY LKKLEIKKTARVHGTHSLRQNFNNALIDKDVISDVRCRLCGHELVGTNATVYGKDYKVEELKRYIELVQFPI
Sequences:
>Translated_472_residues MSTINTQHNPSFYSGKTATRSHYRLTTNRHGTYTLRLVVPKSLQSLIQTKELKKSLRTRDFQKARMLAGHLSYQFDLMLA TLMKKKLSDFNLDVINNIHKDLSVTFNNVQYDFDINNEFERAEYLDLKARIEKHHADVGEVQKNVVVESSATQNSDKKYQ SNFKFVEVKDAFVKERMIKAGGKMTKSIDIYMASINEFWNKILSGTNPPITAINKLNARSFKEHLIGTGITAQTVDNKVA HLQAFFTFIIKNYDYPFNNPFEGLKILNRAELKKVTNSFKPFTMDELKIIFDVERYRAYYKKNIQLYFVPLIQLYSSMRV EEASQLHLDDIRQENGIYYFNLNDDEDKSLKTINAFRNIPVHSKLIEIGLIKYYEERKKLGKRTLFDNQGEYVTTEFGAY LKKLEIKKTARVHGTHSLRQNFNNALIDKDVISDVRCRLCGHELVGTNATVYGKDYKVEELKRYIELVQFPI >Mature_471_residues STINTQHNPSFYSGKTATRSHYRLTTNRHGTYTLRLVVPKSLQSLIQTKELKKSLRTRDFQKARMLAGHLSYQFDLMLAT LMKKKLSDFNLDVINNIHKDLSVTFNNVQYDFDINNEFERAEYLDLKARIEKHHADVGEVQKNVVVESSATQNSDKKYQS NFKFVEVKDAFVKERMIKAGGKMTKSIDIYMASINEFWNKILSGTNPPITAINKLNARSFKEHLIGTGITAQTVDNKVAH LQAFFTFIIKNYDYPFNNPFEGLKILNRAELKKVTNSFKPFTMDELKIIFDVERYRAYYKKNIQLYFVPLIQLYSSMRVE EASQLHLDDIRQENGIYYFNLNDDEDKSLKTINAFRNIPVHSKLIEIGLIKYYEERKKLGKRTLFDNQGEYVTTEFGAYL KKLEIKKTARVHGTHSLRQNFNNALIDKDVISDVRCRLCGHELVGTNATVYGKDYKVEELKRYIELVQFPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55000; Mature: 54869
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTINTQHNPSFYSGKTATRSHYRLTTNRHGTYTLRLVVPKSLQSLIQTKELKKSLRTRD CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHH FQKARMLAGHLSYQFDLMLATLMKKKLSDFNLDVINNIHKDLSVTFNNVQYDFDINNEFE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECEEEEECCCCCHH RAEYLDLKARIEKHHADVGEVQKNVVVESSATQNSDKKYQSNFKFVEVKDAFVKERMIKA HHHHHHHHHHHHHHCCCHHHHHHCEEEECCCCCCCCHHHHCCCCEEEEHHHHHHHHHHHC GGKMTKSIDIYMASINEFWNKILSGTNPPITAINKLNARSFKEHLIGTGITAQTVDNKVA CCCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHH HLQAFFTFIIKNYDYPFNNPFEGLKILNRAELKKVTNSFKPFTMDELKIIFDVERYRAYY HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEHHHHHHHH KKNIQLYFVPLIQLYSSMRVEEASQLHLDDIRQENGIYYFNLNDDEDKSLKTINAFRNIP HCCCEEEEEEHHHHHHHHCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCC VHSKLIEIGLIKYYEERKKLGKRTLFDNQGEYVTTEFGAYLKKLEIKKTARVHGTHSLRQ CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHH NFNNALIDKDVISDVRCRLCGHELVGTNATVYGKDYKVEELKRYIELVQFPI HHHHHHCCHHHHHHHHHHHHCCHHCCCCEEEECCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure STINTQHNPSFYSGKTATRSHYRLTTNRHGTYTLRLVVPKSLQSLIQTKELKKSLRTRD CCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHH FQKARMLAGHLSYQFDLMLATLMKKKLSDFNLDVINNIHKDLSVTFNNVQYDFDINNEFE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECEEEEECCCCCHH RAEYLDLKARIEKHHADVGEVQKNVVVESSATQNSDKKYQSNFKFVEVKDAFVKERMIKA HHHHHHHHHHHHHHCCCHHHHHHCEEEECCCCCCCCHHHHCCCCEEEEHHHHHHHHHHHC GGKMTKSIDIYMASINEFWNKILSGTNPPITAINKLNARSFKEHLIGTGITAQTVDNKVA CCCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHH HLQAFFTFIIKNYDYPFNNPFEGLKILNRAELKKVTNSFKPFTMDELKIIFDVERYRAYY HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEHHHHHHHH KKNIQLYFVPLIQLYSSMRVEEASQLHLDDIRQENGIYYFNLNDDEDKSLKTINAFRNIP HCCCEEEEEEHHHHHHHHCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCC VHSKLIEIGLIKYYEERKKLGKRTLFDNQGEYVTTEFGAYLKKLEIKKTARVHGTHSLRQ CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHH NFNNALIDKDVISDVRCRLCGHELVGTNATVYGKDYKVEELKRYIELVQFPI HHHHHHCCHHHHHHHHHHHHCCHHCCCCEEEECCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA