| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781870
Identifier: 91781870
GI number: 91781870
Start: 545599
End: 545931
Strand: Reverse
Name: 91781870
Synonym: Bxe_A3975
Alternate gene names: NA
Gene position: 545931-545599 (Counterclockwise)
Preceding gene: 91781871
Following gene: 91781868
Centisome position: 11.15
GC content: 57.36
Gene sequence:
>333_bases ATGACGATCGACACCAAAATTCGTCACGTAACCAGGCCCGGTGCCAATCTGTTCCTCGAACTCGGCTTTTCCGCCAAAGA GGCGAAGCAACTGCATGCAGCGTCGCAAAAACAGATCAATGACACGCGGCTGCTCAAGGAGCAGCTCATGACGGAACTGT CCACCTGGATCGAGCAGCATCATCTGAAGCAGGCCGAGGCGGCCGAGATTCTGATGGTGTCGCGCCCGCGCGTGTCCGAC GTGGTCAACAAGAAAACCACCAAATTCACCATCGACACGCTCGTGGAAATGATGAGCCGGATCGGCAAGCCGGTCACGCT GGCAGTCGGCTGA
Upstream 100 bases:
>100_bases TGCATTGCTTCCAGAAGAAAACGCAAAGGCTGGGTCCGCACGACAGGAAGATTGCCGAAACGCGGTATCGCGCCATCATT AACAATAGGAAAACTGAAAA
Downstream 100 bases:
>100_bases CGTGCAAGACTCACCAATGCATGTGATCGTGCATGCGTCGTCGCACTGTCACGCGCGTATTGCCACGGCTCGGCGCTAGC CTGCGCGGCGCTCGTGTTGC
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MTIDTKIRHVTRPGANLFLELGFSAKEAKQLHAASQKQINDTRLLKEQLMTELSTWIEQHHLKQAEAAEILMVSRPRVSD VVNKKTTKFTIDTLVEMMSRIGKPVTLAVG
Sequences:
>Translated_110_residues MTIDTKIRHVTRPGANLFLELGFSAKEAKQLHAASQKQINDTRLLKEQLMTELSTWIEQHHLKQAEAAEILMVSRPRVSD VVNKKTTKFTIDTLVEMMSRIGKPVTLAVG >Mature_109_residues TIDTKIRHVTRPGANLFLELGFSAKEAKQLHAASQKQINDTRLLKEQLMTELSTWIEQHHLKQAEAAEILMVSRPRVSDV VNKKTTKFTIDTLVEMMSRIGKPVTLAVG
Specific function: Unknown
COG id: COG5606
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12411; Mature: 12280
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDTKIRHVTRPGANLFLELGFSAKEAKQLHAASQKQINDTRLLKEQLMTELSTWIEQH CCCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH HLKQAEAAEILMVSRPRVSDVVNKKTTKFTIDTLVEMMSRIGKPVTLAVG HHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECC >Mature Secondary Structure TIDTKIRHVTRPGANLFLELGFSAKEAKQLHAASQKQINDTRLLKEQLMTELSTWIEQH CCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH HLKQAEAAEILMVSRPRVSDVVNKKTTKFTIDTLVEMMSRIGKPVTLAVG HHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA