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The map label for this gene is yobV [H]

Identifier: 91781840

GI number: 91781840

Start: 511141

End: 511881

Strand: Reverse

Name: yobV [H]

Synonym: Bxe_A4005

Alternate gene names: 91781840

Gene position: 511881-511141 (Counterclockwise)

Preceding gene: 91781841

Following gene: 91781836

Centisome position: 10.46

GC content: 65.18

Gene sequence:

>741_bases
ATGCGGCGCTATCATCGCGGGACTGTCCCGGTCCTCCTCTACACCACGCCCACGATGACGCGCCGCGCCGACCGCCTGTT
CCAGATCGCCGAACTGCTGCGCGGACGGCGTCTGACCACCGCGCAGCAACTCGCCGACTGGCTGAATATCTCGCTGCGCA
CGGTCTATCGCGATGTGCGTGATCTGCAACTGTCTGGCGTGCCGATCGAGGGCGAAGCCGGCATCGGCTACCGGCTGAGC
CGCACGGCGAGTTTGCCGCCGCTCACCTTCACCGCCGACGAACTGGCCGCGCTCGCCGCGGGCGCACGCATGCTCGAGTC
ATGGGGAGGCGCCGCCTTTGCCGGCGGCGCGCGCGGCGCGCTCGCCAAAATCGCTTCGGCCATGCCCGCCGACAAGCGCG
CGGCGCTGGAAAGGCTGGCGGTTTTCGCGCCGTCGTTTCACATCAAGGGTAATTTTTCGGCGCAACTGGACGCGCTGCAT
CGCGCGATCGATACGCGGCACGTGGTGAGCTTCGCTTACGTCGACGTGAATGGCGCGGCGACCGAACGACGGGTCTGGCC
GCTTGCACTCGCGTATTGGGGCGCGCGCTGGACGCTTGGCGCGTGGTGTGAATTGCGCAGCGATTTCCGCAATTTCGGAC
TGGAGAAGATCCAGAATCTTCAGGTGCTCGAACAGTATCCGGATCAGGAAGGCAAACGGCTTGCGGATCTGTTGCGACAT
GTGAATGCCAGGTCGAAGTGA

Upstream 100 bases:

>100_bases
CGGCCTGCATTCGCGGACAAACGGTTAAGCTCAAGCGCATCACGACGCTCACGCGCGGCGGGCGCGAGGCGCCGCGCACG
AACGCCGACCGGAGCGCGGC

Downstream 100 bases:

>100_bases
GGATGGCGGTTTGCCGTTGCGAGGCAAACCGCCATCCTGTTCCAGGCGGCTTTATTCCACCGCCTTCACCATATCTTCGA
TCACCTTCTTCGCATCGCCG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MRRYHRGTVPVLLYTTPTMTRRADRLFQIAELLRGRRLTTAQQLADWLNISLRTVYRDVRDLQLSGVPIEGEAGIGYRLS
RTASLPPLTFTADELAALAAGARMLESWGGAAFAGGARGALAKIASAMPADKRAALERLAVFAPSFHIKGNFSAQLDALH
RAIDTRHVVSFAYVDVNGAATERRVWPLALAYWGARWTLGAWCELRSDFRNFGLEKIQNLQVLEQYPDQEGKRLADLLRH
VNARSK

Sequences:

>Translated_246_residues
MRRYHRGTVPVLLYTTPTMTRRADRLFQIAELLRGRRLTTAQQLADWLNISLRTVYRDVRDLQLSGVPIEGEAGIGYRLS
RTASLPPLTFTADELAALAAGARMLESWGGAAFAGGARGALAKIASAMPADKRAALERLAVFAPSFHIKGNFSAQLDALH
RAIDTRHVVSFAYVDVNGAATERRVWPLALAYWGARWTLGAWCELRSDFRNFGLEKIQNLQVLEQYPDQEGKRLADLLRH
VNARSK
>Mature_246_residues
MRRYHRGTVPVLLYTTPTMTRRADRLFQIAELLRGRRLTTAQQLADWLNISLRTVYRDVRDLQLSGVPIEGEAGIGYRLS
RTASLPPLTFTADELAALAAGARMLESWGGAAFAGGARGALAKIASAMPADKRAALERLAVFAPSFHIKGNFSAQLDALH
RAIDTRHVVSFAYVDVNGAATERRVWPLALAYWGARWTLGAWCELRSDFRNFGLEKIQNLQVLEQYPDQEGKRLADLLRH
VNARSK

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 27417; Mature: 27417

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRYHRGTVPVLLYTTPTMTRRADRLFQIAELLRGRRLTTAQQLADWLNISLRTVYRDVR
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
DLQLSGVPIEGEAGIGYRLSRTASLPPLTFTADELAALAAGARMLESWGGAAFAGGARGA
HHEECCCCCCCCCCCCEEECCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCEECCCCHHH
LAKIASAMPADKRAALERLAVFAPSFHIKGNFSAQLDALHRAIDTRHVVSFAYVDVNGAA
HHHHHHHCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHEEEEEEEECCCCC
TERRVWPLALAYWGARWTLGAWCELRSDFRNFGLEKIQNLQVLEQYPDQEGKRLADLLRH
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
VNARSK
HCCCCC
>Mature Secondary Structure
MRRYHRGTVPVLLYTTPTMTRRADRLFQIAELLRGRRLTTAQQLADWLNISLRTVYRDVR
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
DLQLSGVPIEGEAGIGYRLSRTASLPPLTFTADELAALAAGARMLESWGGAAFAGGARGA
HHEECCCCCCCCCCCCEEECCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCEECCCCHHH
LAKIASAMPADKRAALERLAVFAPSFHIKGNFSAQLDALHRAIDTRHVVSFAYVDVNGAA
HHHHHHHCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHEEEEEEEECCCCC
TERRVWPLALAYWGARWTLGAWCELRSDFRNFGLEKIQNLQVLEQYPDQEGKRLADLLRH
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
VNARSK
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]