| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is pntB [H]
Identifier: 91781839
GI number: 91781839
Start: 509635
End: 511089
Strand: Direct
Name: pntB [H]
Synonym: Bxe_A4006
Alternate gene names: 91781839
Gene position: 509635-511089 (Clockwise)
Preceding gene: 91781838
Following gene: 91781848
Centisome position: 10.41
GC content: 62.61
Gene sequence:
>1455_bases ATGAGTCTGAACGTCGTCACGCTGCTTTATCTGGTCGCGTCGGTCTGCTTCATTCAGGCGCTCAAGGGGCTGTCGAATCC GAAGACCGCGCGCATCGGCAATACCTTCGGCATGGCCGGGATGGCGATCGCGATCCTCACCACCATCGCGCTGATCGTCA AGCAGGCTAACGGGCTCGGGTCGAACCTCGGTTTGGGGCTTGGACTGCTGCTGGTCGCGCTGGTGATCGGCGGCGCGATC GGCGCGTTCGTCGCCGCGCGCGTGGAAATGACCAAGATGCCGGAGCTGGTCGCGGCGATGCACTCGCTGATCGGTCTGGC CGCCGTGTGTATCGCTTATGCGGTGGTGTCCGAGCCGGCGGCGTTCGGTCTGGTCGATCCGGAGAACACCGCGCCGGGTT TCCTGCCGTATGGCAATCGCGTCGAGCTGTTCATCGGCACGTTCGTCGGCGCGATCACGTTCTCCGGTTCGGTGATCGCG TTCGGCAAGCTGTCGGGTAAGTACAAGTTCCGCCTGTTCCAGGGTGCGCCGGTCGTGTATGCCGGGCAGCATCTGATCAA CCTGCTGCTCGCGCTCGCGATGCTCGGCTTCGGCGTGATCTTCTTCCTCACGCAATCGTGGCTGCCGTTCATCATCATGA CGGTGATCGCCTTCGTGCTGGGCGTGCTGATCATCATTCCGATCGGCGGCGCGGACATGCCGGTGGTGGTGTCGATGCTG AATTCGTACTCGGGCTGGGCGGCGGCGGGCATCGGCTTCTCGCTGAACAATCCGATGCTGATCATCGCGGGCTCGCTGGT GGGGTCGTCGGGTGCGATTCTGTCGTACATCATGTGCCGTGCGATGAACCGCTCGTTCTTCAACGTGATTCTCGGCGGCT TTGGTAACGAGCCGGGCGCGGCTGCCGCGGGCGGCGCGGCTGAACAACGTCCGGTGAAATCCGGTTCGGCCGACGACGCG GCATTCATGCTCGGCAACGCAGAGACCGTGGTGATCGTGCCGGGTTATGGGCTGGCGGTGGCGCGCGCGCAGCATGCGTT GAAGGAGTTGACCGACAAGCTGGTCGGAAAGGGTATCGAGGTGAAGTACGCGATTCACCCGGTGGCCGGACGGATGCCGG GGCACATGAACGTGCTGCTCGCCGAAGCCGAAGTACCGTACGACATGGTCTATGAAATGGACGACATCAACGGCGAGTTC GGCCAGGTCGACGTGGTGCTGGTGCTCGGCGCGAACGACGTGGTGAATCCGGCGGCGAAGAACGATCCGAAGTCGCCGAT CGCGGGCATGCCGATCATCGAGGCGTACAAGGCGCGCACGGTGATCGTGAACAAGCGCTCGATGGCGGCGGGTTACGCGG GTCTCGACAATGACCTGTTCTACATGGACAAGACGATGATGGTGTTCGGCGATGCGAAGAAGGTGATCGAAGATATGGTG AAGGCGGTGGAATAA
Upstream 100 bases:
>100_bases TGTTCGGCGGATTCCTCGTGACGCGGCGAATGCTGGAGATGTTCCGCAAGAAAGAGCCGAAGAAGCTGATTGCAGACAAG ACGGCAAAGGAGAACGCGTA
Downstream 100 bases:
>100_bases AGCCGCCTGGAACAGGATGGCGGTTTGCCTCGCAACGGCAAACCGCCATCCTCACTTCGACCTGGCATTCACATGTCGCA ACAGATCCGCAAGCCGTTTG
Product: putative NAD(P) transhydrogenase, beta subunit
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit beta; Proton-translocating transhydrogenase NADP(H)-binding component; Pyridine nucleotide transhydrogenase subunit beta; dIII [H]
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MSLNVVTLLYLVASVCFIQALKGLSNPKTARIGNTFGMAGMAIAILTTIALIVKQANGLGSNLGLGLGLLLVALVIGGAI GAFVAARVEMTKMPELVAAMHSLIGLAAVCIAYAVVSEPAAFGLVDPENTAPGFLPYGNRVELFIGTFVGAITFSGSVIA FGKLSGKYKFRLFQGAPVVYAGQHLINLLLALAMLGFGVIFFLTQSWLPFIIMTVIAFVLGVLIIIPIGGADMPVVVSML NSYSGWAAAGIGFSLNNPMLIIAGSLVGSSGAILSYIMCRAMNRSFFNVILGGFGNEPGAAAAGGAAEQRPVKSGSADDA AFMLGNAETVVIVPGYGLAVARAQHALKELTDKLVGKGIEVKYAIHPVAGRMPGHMNVLLAEAEVPYDMVYEMDDINGEF GQVDVVLVLGANDVVNPAAKNDPKSPIAGMPIIEAYKARTVIVNKRSMAAGYAGLDNDLFYMDKTMMVFGDAKKVIEDMV KAVE
Sequences:
>Translated_484_residues MSLNVVTLLYLVASVCFIQALKGLSNPKTARIGNTFGMAGMAIAILTTIALIVKQANGLGSNLGLGLGLLLVALVIGGAI GAFVAARVEMTKMPELVAAMHSLIGLAAVCIAYAVVSEPAAFGLVDPENTAPGFLPYGNRVELFIGTFVGAITFSGSVIA FGKLSGKYKFRLFQGAPVVYAGQHLINLLLALAMLGFGVIFFLTQSWLPFIIMTVIAFVLGVLIIIPIGGADMPVVVSML NSYSGWAAAGIGFSLNNPMLIIAGSLVGSSGAILSYIMCRAMNRSFFNVILGGFGNEPGAAAAGGAAEQRPVKSGSADDA AFMLGNAETVVIVPGYGLAVARAQHALKELTDKLVGKGIEVKYAIHPVAGRMPGHMNVLLAEAEVPYDMVYEMDDINGEF GQVDVVLVLGANDVVNPAAKNDPKSPIAGMPIIEAYKARTVIVNKRSMAAGYAGLDNDLFYMDKTMMVFGDAKKVIEDMV KAVE >Mature_483_residues SLNVVTLLYLVASVCFIQALKGLSNPKTARIGNTFGMAGMAIAILTTIALIVKQANGLGSNLGLGLGLLLVALVIGGAIG AFVAARVEMTKMPELVAAMHSLIGLAAVCIAYAVVSEPAAFGLVDPENTAPGFLPYGNRVELFIGTFVGAITFSGSVIAF GKLSGKYKFRLFQGAPVVYAGQHLINLLLALAMLGFGVIFFLTQSWLPFIIMTVIAFVLGVLIIIPIGGADMPVVVSMLN SYSGWAAAGIGFSLNNPMLIIAGSLVGSSGAILSYIMCRAMNRSFFNVILGGFGNEPGAAAAGGAAEQRPVKSGSADDAA FMLGNAETVVIVPGYGLAVARAQHALKELTDKLVGKGIEVKYAIHPVAGRMPGHMNVLLAEAEVPYDMVYEMDDINGEFG QVDVVLVLGANDVVNPAAKNDPKSPIAGMPIIEAYKARTVIVNKRSMAAGYAGLDNDLFYMDKTMMVFGDAKKVIEDMVK AVE
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG1282
COG function: function code C; NAD/NADP transhydrogenase beta subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNT beta subunit family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=493, Percent_Identity=44.8275862068966, Blast_Score=387, Evalue=1e-108, Organism=Homo sapiens, GI122939153, Length=493, Percent_Identity=44.8275862068966, Blast_Score=387, Evalue=1e-108, Organism=Escherichia coli, GI1787886, Length=487, Percent_Identity=51.5400410677618, Blast_Score=461, Evalue=1e-131, Organism=Caenorhabditis elegans, GI17550456, Length=486, Percent_Identity=43.6213991769547, Blast_Score=363, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012136 - InterPro: IPR004003 [H]
Pfam domain/function: PF02233 PNTB [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 50535; Mature: 50404
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNVVTLLYLVASVCFIQALKGLSNPKTARIGNTFGMAGMAIAILTTIALIVKQANGLG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC SNLGLGLGLLLVALVIGGAIGAFVAARVEMTKMPELVAAMHSLIGLAAVCIAYAVVSEPA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AFGLVDPENTAPGFLPYGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPVVY CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEEECCCEEEEEEEECCCEEE AGQHLINLLLALAMLGFGVIFFLTQSWLPFIIMTVIAFVLGVLIIIPIGGADMPVVVSML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHH NSYSGWAAAGIGFSLNNPMLIIAGSLVGSSGAILSYIMCRAMNRSFFNVILGGFGNEPGA HCCCCCEEECCCEECCCCEEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCC AAAGGAAEQRPVKSGSADDAAFMLGNAETVVIVPGYGLAVARAQHALKELTDKLVGKGIE CCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCE VKYAIHPVAGRMPGHMNVLLAEAEVPYDMVYEMDDINGEFGQVDVVLVLGANDVVNPAAK EEEEEECCCCCCCCCCEEEEEECCCCHHHEEEECCCCCCCCCEEEEEEECCCCCCCCCCC NDPKSPIAGMPIIEAYKARTVIVNKRSMAAGYAGLDNDLFYMDKTMMVFGDAKKVIEDMV CCCCCCCCCCCHHHHHCCEEEEEECHHHHCCCCCCCCCEEEECCEEEEECCHHHHHHHHH KAVE HHCC >Mature Secondary Structure SLNVVTLLYLVASVCFIQALKGLSNPKTARIGNTFGMAGMAIAILTTIALIVKQANGLG CCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC SNLGLGLGLLLVALVIGGAIGAFVAARVEMTKMPELVAAMHSLIGLAAVCIAYAVVSEPA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AFGLVDPENTAPGFLPYGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPVVY CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEEECCCEEEEEEEECCCEEE AGQHLINLLLALAMLGFGVIFFLTQSWLPFIIMTVIAFVLGVLIIIPIGGADMPVVVSML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHH NSYSGWAAAGIGFSLNNPMLIIAGSLVGSSGAILSYIMCRAMNRSFFNVILGGFGNEPGA HCCCCCEEECCCEECCCCEEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCC AAAGGAAEQRPVKSGSADDAAFMLGNAETVVIVPGYGLAVARAQHALKELTDKLVGKGIE CCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCE VKYAIHPVAGRMPGHMNVLLAEAEVPYDMVYEMDDINGEFGQVDVVLVLGANDVVNPAAK EEEEEECCCCCCCCCCEEEEEECCCCHHHEEEECCCCCCCCCEEEEEEECCCCCCCCCCC NDPKSPIAGMPIIEAYKARTVIVNKRSMAAGYAGLDNDLFYMDKTMMVFGDAKKVIEDMV CCCCCCCCCCCHHHHHCCEEEEEECHHHHCCCCCCCCCEEEECCEEEEECCHHHHHHHHH KAVE HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8075801 [H]