Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 91781807

GI number: 91781807

Start: 470861

End: 472648

Strand: Direct

Name: mmgC [H]

Synonym: Bxe_A4038

Alternate gene names: 91781807

Gene position: 470861-472648 (Clockwise)

Preceding gene: 91781806

Following gene: 91781808

Centisome position: 9.62

GC content: 62.58

Gene sequence:

>1788_bases
ATGGGACAGTACGCCGCGCCGCTGCGCGACATGCAATTCGTGTTGCACGAACTGCTCAACGTCGAAGCCGAAATCAGGCA
GATGCCGAAGCACGCGGATCTCGACGCCGACACGATCAACGCGGTGCTCGAAGAAGCCGGCAAGTTCTGCTCCGAAGTAT
TGTTCCCGCTCAACCACAGCGGCGACCAGGAAGGCTGCACGTACGTCGGCGACGGCGTCGTGACCACGCCGAAGGGCTTC
AAGGAAGCCTATGCGCAGTACGTCGAAGCCGGCTGGCCCGCACTGGGCTGCGATCCGGAGTACGGCGGCCAGGGGCTGCC
CGCGTTCGTCAACAACGCGCTGTATGAAATGCTGAACTCGGCGAATCAGGCGTGGACCATGTACCCGGGCCTCTCGCATG
GCGCGTACGAATGTCTGCACGCGCACGGCACGCCGGAGTTGCAACAGCGCTATCTGCCGAAACTCGTCGCCGGTGTCTGG
ACCGGCACGATGTGTCTGACCGAGCCGCATTGCGGCACGGACCTCGGCATTCTGCGCACCAAGGCCGAACCGAACAGCGA
CGGCTCGTACGCGATCAGCGGCACGAAGATCTTCATCTCCAGCGGCGAACACGATCTCGCGGAGAACATCGTTCACCTCG
TGCTCGCGCGTCTGCCGGATGCGCCGAAGGGCACCAAGGGCATTTCGCTTTTCATCGTGCCGAAGTTCGTGCCGAACGAG
GCGGGCGAGCCGGGCGAGCGCAACGGCGTGAAGTGCGGTTCCATCGAACACAAGATGGGCATTCACGGCAACGCGACCTG
CGTGATCAATCTCGACAACGCCAAGGGTTGGCTGGTTGGCGAGCCGAACAAGGGCTTGAACGCCATGTTCGTGATGATGA
ACGCCGCGCGTCTCGGCGTCGGCATGCAGAGCCTGGGCCTGACCGAAGTCGCGTATCAGAACTCGCTGGTGTACGCGAAA
GAGCGTCTGCAGATGCGTTCGCTGACCGGCCCGAAGGCGCCGGACAAGGCCGCCGACCCGATCATCGTGCATCCGGACGT
GCGCCGCATGCTGCTCACGCAAAAAGCCTACGCCGAAGGCGCGCGCGCTTTCTCGTACTGGTCCGCGCTGCATATCGACA
AGGAACTGTCGCACGCTGACGAATCGGTGCGCAAGGAAGCCGCGGACCTCGTCGCGCTGCTCACGCCGATCCTGAAAGCG
TTCCTGTCGGACAATGCGTTCGAAGGCACCAATCACGCCATGCAGATCTACGGCGGCCACGGTTTCATCGCCGAGTGGGG
CATGGAGCAGTACGTGCGCGACGCGCGCATCAATATGATCTACGAAGGCACCAACGCGATTCAGGCGCTCGACCTGCTCG
GCCGCAAGATCCTCGGCGACATGGGCGCGAAGATGAAGAAGTTCGGCAAGCTGGTGGCCGAATTCGTCGAAGCGGAAGGC
GTGAAGCCGGAAATGCAGGAGTTCATCAACCCGCTCGCCGACATCGGCGAAAAGGTGCAGAAGCTGATGATGGAAATCGG
CATGAAGGCCATGCAGAACCCGGACGAAGTCGGCGCCGCCGCCGTACCGTATCTGCGCACCGTCGGCCACCTGGTGTTCT
CGTATTTCTGGGCGCGCATGGCACGCATCGCGCTGGACAAGGAAGCCTCGGGCGATCCGTTCTACAAGGCGAAGCTCGCC
ACCGCACGCTTCTACTTTGCGAAGCTGCTGCCGGAAACGGCCATGACGATCCGTCAGGCCCGCGCCGGCTCGAAGTCGAT
GATGGAAGTCGACGAAGCGCTGTTCTAA

Upstream 100 bases:

>100_bases
CAGCGTCGCCGCCATTGAGGCGGATTCAGCGGCGCGGAAAGTTCCGGTTCACGGACTCGGCTAACAGCCTGGCTTCTTGT
CAAACTTGGGAGAGAGAGTC

Downstream 100 bases:

>100_bases
GCCACATCGCGGCAGGCGCCACGCGCTGGAAAATGCGTGGCGCCTGCGTCAGCCACCTGTCGCGAAGCGTCCAACCAGGC
TTCGCGACCCCGCATATCTC

Product: putative acyl-CoA dehydrogenase oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 595; Mature: 594

Protein sequence:

>595_residues
MGQYAAPLRDMQFVLHELLNVEAEIRQMPKHADLDADTINAVLEEAGKFCSEVLFPLNHSGDQEGCTYVGDGVVTTPKGF
KEAYAQYVEAGWPALGCDPEYGGQGLPAFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHGTPELQQRYLPKLVAGVW
TGTMCLTEPHCGTDLGILRTKAEPNSDGSYAISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFVPNE
AGEPGERNGVKCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEVAYQNSLVYAK
ERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTQKAYAEGARAFSYWSALHIDKELSHADESVRKEAADLVALLTPILKA
FLSDNAFEGTNHAMQIYGGHGFIAEWGMEQYVRDARINMIYEGTNAIQALDLLGRKILGDMGAKMKKFGKLVAEFVEAEG
VKPEMQEFINPLADIGEKVQKLMMEIGMKAMQNPDEVGAAAVPYLRTVGHLVFSYFWARMARIALDKEASGDPFYKAKLA
TARFYFAKLLPETAMTIRQARAGSKSMMEVDEALF

Sequences:

>Translated_595_residues
MGQYAAPLRDMQFVLHELLNVEAEIRQMPKHADLDADTINAVLEEAGKFCSEVLFPLNHSGDQEGCTYVGDGVVTTPKGF
KEAYAQYVEAGWPALGCDPEYGGQGLPAFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHGTPELQQRYLPKLVAGVW
TGTMCLTEPHCGTDLGILRTKAEPNSDGSYAISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFVPNE
AGEPGERNGVKCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEVAYQNSLVYAK
ERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTQKAYAEGARAFSYWSALHIDKELSHADESVRKEAADLVALLTPILKA
FLSDNAFEGTNHAMQIYGGHGFIAEWGMEQYVRDARINMIYEGTNAIQALDLLGRKILGDMGAKMKKFGKLVAEFVEAEG
VKPEMQEFINPLADIGEKVQKLMMEIGMKAMQNPDEVGAAAVPYLRTVGHLVFSYFWARMARIALDKEASGDPFYKAKLA
TARFYFAKLLPETAMTIRQARAGSKSMMEVDEALF
>Mature_594_residues
GQYAAPLRDMQFVLHELLNVEAEIRQMPKHADLDADTINAVLEEAGKFCSEVLFPLNHSGDQEGCTYVGDGVVTTPKGFK
EAYAQYVEAGWPALGCDPEYGGQGLPAFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHGTPELQQRYLPKLVAGVWT
GTMCLTEPHCGTDLGILRTKAEPNSDGSYAISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFVPNEA
GEPGERNGVKCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEVAYQNSLVYAKE
RLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTQKAYAEGARAFSYWSALHIDKELSHADESVRKEAADLVALLTPILKAF
LSDNAFEGTNHAMQIYGGHGFIAEWGMEQYVRDARINMIYEGTNAIQALDLLGRKILGDMGAKMKKFGKLVAEFVEAEGV
KPEMQEFINPLADIGEKVQKLMMEIGMKAMQNPDEVGAAAVPYLRTVGHLVFSYFWARMARIALDKEASGDPFYKAKLAT
ARFYFAKLLPETAMTIRQARAGSKSMMEVDEALF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=415, Percent_Identity=27.710843373494, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI21361497, Length=429, Percent_Identity=26.3403263403263, Blast_Score=112, Evalue=7e-25,
Organism=Homo sapiens, GI7656849, Length=367, Percent_Identity=25.8855585831063, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI4557233, Length=316, Percent_Identity=29.4303797468354, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI76496475, Length=420, Percent_Identity=26.9047619047619, Blast_Score=105, Evalue=2e-22,
Organism=Homo sapiens, GI4557235, Length=420, Percent_Identity=26.9047619047619, Blast_Score=105, Evalue=2e-22,
Organism=Homo sapiens, GI226958412, Length=447, Percent_Identity=23.9373601789709, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI4501857, Length=324, Percent_Identity=27.7777777777778, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI226958414, Length=396, Percent_Identity=23.989898989899, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI4557231, Length=356, Percent_Identity=28.6516853932584, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI187960098, Length=356, Percent_Identity=28.6516853932584, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI4503943, Length=351, Percent_Identity=27.6353276353276, Blast_Score=77, Evalue=6e-14,
Organism=Homo sapiens, GI7669494, Length=192, Percent_Identity=30.7291666666667, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI87082384, Length=410, Percent_Identity=25.8536585365854, Blast_Score=116, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI17508101, Length=364, Percent_Identity=28.5714285714286, Blast_Score=125, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI17533517, Length=423, Percent_Identity=26.9503546099291, Blast_Score=122, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI17569725, Length=370, Percent_Identity=29.7297297297297, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17534899, Length=367, Percent_Identity=29.9727520435967, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71985184, Length=377, Percent_Identity=28.3819628647215, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17506239, Length=364, Percent_Identity=26.6483516483516, Blast_Score=108, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI86563383, Length=373, Percent_Identity=26.2734584450402, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI86563381, Length=373, Percent_Identity=26.2734584450402, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17538396, Length=367, Percent_Identity=25.3405994550409, Blast_Score=95, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI17570075, Length=385, Percent_Identity=26.2337662337662, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71990804, Length=186, Percent_Identity=33.3333333333333, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI32563615, Length=230, Percent_Identity=28.2608695652174, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71985192, Length=252, Percent_Identity=30.1587301587302, Blast_Score=83, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI71982178, Length=237, Percent_Identity=28.2700421940928, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI281363737, Length=459, Percent_Identity=25.4901960784314, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24666513, Length=380, Percent_Identity=27.8947368421053, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI21356377, Length=373, Percent_Identity=26.2734584450402, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24646207, Length=383, Percent_Identity=25.5874673629243, Blast_Score=102, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24660351, Length=314, Percent_Identity=28.0254777070064, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI21355753, Length=377, Percent_Identity=25.4641909814324, Blast_Score=92, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 65131; Mature: 64999

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQYAAPLRDMQFVLHELLNVEAEIRQMPKHADLDADTINAVLEEAGKFCSEVLFPLNHS
CCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
GDQEGCTYVGDGVVTTPKGFKEAYAQYVEAGWPALGCDPEYGGQGLPAFVNNALYEMLNS
CCCCCCEEECCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
ANQAWTMYPGLSHGAYECLHAHGTPELQQRYLPKLVAGVWTGTMCLTEPHCGTDLGILRT
CCCCEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEE
KAEPNSDGSYAISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFVPNE
CCCCCCCCCEEEECEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCC
AGEPGERNGVKCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGV
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHCC
GMQSLGLTEVAYQNSLVYAKERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTQKAYAEG
CHHHCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHH
ARAFSYWSALHIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC
GFIAEWGMEQYVRDARINMIYEGTNAIQALDLLGRKILGDMGAKMKKFGKLVAEFVEAEG
CHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VKPEMQEFINPLADIGEKVQKLMMEIGMKAMQNPDEVGAAAVPYLRTVGHLVFSYFWARM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHH
ARIALDKEASGDPFYKAKLATARFYFAKLLPETAMTIRQARAGSKSMMEVDEALF
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure 
GQYAAPLRDMQFVLHELLNVEAEIRQMPKHADLDADTINAVLEEAGKFCSEVLFPLNHS
CCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
GDQEGCTYVGDGVVTTPKGFKEAYAQYVEAGWPALGCDPEYGGQGLPAFVNNALYEMLNS
CCCCCCEEECCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
ANQAWTMYPGLSHGAYECLHAHGTPELQQRYLPKLVAGVWTGTMCLTEPHCGTDLGILRT
CCCCEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEE
KAEPNSDGSYAISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFVPNE
CCCCCCCCCEEEECEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCC
AGEPGERNGVKCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGV
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHCC
GMQSLGLTEVAYQNSLVYAKERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTQKAYAEG
CHHHCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHH
ARAFSYWSALHIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC
GFIAEWGMEQYVRDARINMIYEGTNAIQALDLLGRKILGDMGAKMKKFGKLVAEFVEAEG
CHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VKPEMQEFINPLADIGEKVQKLMMEIGMKAMQNPDEVGAAAVPYLRTVGHLVFSYFWARM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHH
ARIALDKEASGDPFYKAKLATARFYFAKLLPETAMTIRQARAGSKSMMEVDEALF
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]