| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is mmgC [H]
Identifier: 91781807
GI number: 91781807
Start: 470861
End: 472648
Strand: Direct
Name: mmgC [H]
Synonym: Bxe_A4038
Alternate gene names: 91781807
Gene position: 470861-472648 (Clockwise)
Preceding gene: 91781806
Following gene: 91781808
Centisome position: 9.62
GC content: 62.58
Gene sequence:
>1788_bases ATGGGACAGTACGCCGCGCCGCTGCGCGACATGCAATTCGTGTTGCACGAACTGCTCAACGTCGAAGCCGAAATCAGGCA GATGCCGAAGCACGCGGATCTCGACGCCGACACGATCAACGCGGTGCTCGAAGAAGCCGGCAAGTTCTGCTCCGAAGTAT TGTTCCCGCTCAACCACAGCGGCGACCAGGAAGGCTGCACGTACGTCGGCGACGGCGTCGTGACCACGCCGAAGGGCTTC AAGGAAGCCTATGCGCAGTACGTCGAAGCCGGCTGGCCCGCACTGGGCTGCGATCCGGAGTACGGCGGCCAGGGGCTGCC CGCGTTCGTCAACAACGCGCTGTATGAAATGCTGAACTCGGCGAATCAGGCGTGGACCATGTACCCGGGCCTCTCGCATG GCGCGTACGAATGTCTGCACGCGCACGGCACGCCGGAGTTGCAACAGCGCTATCTGCCGAAACTCGTCGCCGGTGTCTGG ACCGGCACGATGTGTCTGACCGAGCCGCATTGCGGCACGGACCTCGGCATTCTGCGCACCAAGGCCGAACCGAACAGCGA CGGCTCGTACGCGATCAGCGGCACGAAGATCTTCATCTCCAGCGGCGAACACGATCTCGCGGAGAACATCGTTCACCTCG TGCTCGCGCGTCTGCCGGATGCGCCGAAGGGCACCAAGGGCATTTCGCTTTTCATCGTGCCGAAGTTCGTGCCGAACGAG GCGGGCGAGCCGGGCGAGCGCAACGGCGTGAAGTGCGGTTCCATCGAACACAAGATGGGCATTCACGGCAACGCGACCTG CGTGATCAATCTCGACAACGCCAAGGGTTGGCTGGTTGGCGAGCCGAACAAGGGCTTGAACGCCATGTTCGTGATGATGA ACGCCGCGCGTCTCGGCGTCGGCATGCAGAGCCTGGGCCTGACCGAAGTCGCGTATCAGAACTCGCTGGTGTACGCGAAA GAGCGTCTGCAGATGCGTTCGCTGACCGGCCCGAAGGCGCCGGACAAGGCCGCCGACCCGATCATCGTGCATCCGGACGT GCGCCGCATGCTGCTCACGCAAAAAGCCTACGCCGAAGGCGCGCGCGCTTTCTCGTACTGGTCCGCGCTGCATATCGACA AGGAACTGTCGCACGCTGACGAATCGGTGCGCAAGGAAGCCGCGGACCTCGTCGCGCTGCTCACGCCGATCCTGAAAGCG TTCCTGTCGGACAATGCGTTCGAAGGCACCAATCACGCCATGCAGATCTACGGCGGCCACGGTTTCATCGCCGAGTGGGG CATGGAGCAGTACGTGCGCGACGCGCGCATCAATATGATCTACGAAGGCACCAACGCGATTCAGGCGCTCGACCTGCTCG GCCGCAAGATCCTCGGCGACATGGGCGCGAAGATGAAGAAGTTCGGCAAGCTGGTGGCCGAATTCGTCGAAGCGGAAGGC GTGAAGCCGGAAATGCAGGAGTTCATCAACCCGCTCGCCGACATCGGCGAAAAGGTGCAGAAGCTGATGATGGAAATCGG CATGAAGGCCATGCAGAACCCGGACGAAGTCGGCGCCGCCGCCGTACCGTATCTGCGCACCGTCGGCCACCTGGTGTTCT CGTATTTCTGGGCGCGCATGGCACGCATCGCGCTGGACAAGGAAGCCTCGGGCGATCCGTTCTACAAGGCGAAGCTCGCC ACCGCACGCTTCTACTTTGCGAAGCTGCTGCCGGAAACGGCCATGACGATCCGTCAGGCCCGCGCCGGCTCGAAGTCGAT GATGGAAGTCGACGAAGCGCTGTTCTAA
Upstream 100 bases:
>100_bases CAGCGTCGCCGCCATTGAGGCGGATTCAGCGGCGCGGAAAGTTCCGGTTCACGGACTCGGCTAACAGCCTGGCTTCTTGT CAAACTTGGGAGAGAGAGTC
Downstream 100 bases:
>100_bases GCCACATCGCGGCAGGCGCCACGCGCTGGAAAATGCGTGGCGCCTGCGTCAGCCACCTGTCGCGAAGCGTCCAACCAGGC TTCGCGACCCCGCATATCTC
Product: putative acyl-CoA dehydrogenase oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 595; Mature: 594
Protein sequence:
>595_residues MGQYAAPLRDMQFVLHELLNVEAEIRQMPKHADLDADTINAVLEEAGKFCSEVLFPLNHSGDQEGCTYVGDGVVTTPKGF KEAYAQYVEAGWPALGCDPEYGGQGLPAFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHGTPELQQRYLPKLVAGVW TGTMCLTEPHCGTDLGILRTKAEPNSDGSYAISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFVPNE AGEPGERNGVKCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEVAYQNSLVYAK ERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTQKAYAEGARAFSYWSALHIDKELSHADESVRKEAADLVALLTPILKA FLSDNAFEGTNHAMQIYGGHGFIAEWGMEQYVRDARINMIYEGTNAIQALDLLGRKILGDMGAKMKKFGKLVAEFVEAEG VKPEMQEFINPLADIGEKVQKLMMEIGMKAMQNPDEVGAAAVPYLRTVGHLVFSYFWARMARIALDKEASGDPFYKAKLA TARFYFAKLLPETAMTIRQARAGSKSMMEVDEALF
Sequences:
>Translated_595_residues MGQYAAPLRDMQFVLHELLNVEAEIRQMPKHADLDADTINAVLEEAGKFCSEVLFPLNHSGDQEGCTYVGDGVVTTPKGF KEAYAQYVEAGWPALGCDPEYGGQGLPAFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHGTPELQQRYLPKLVAGVW TGTMCLTEPHCGTDLGILRTKAEPNSDGSYAISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFVPNE AGEPGERNGVKCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEVAYQNSLVYAK ERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTQKAYAEGARAFSYWSALHIDKELSHADESVRKEAADLVALLTPILKA FLSDNAFEGTNHAMQIYGGHGFIAEWGMEQYVRDARINMIYEGTNAIQALDLLGRKILGDMGAKMKKFGKLVAEFVEAEG VKPEMQEFINPLADIGEKVQKLMMEIGMKAMQNPDEVGAAAVPYLRTVGHLVFSYFWARMARIALDKEASGDPFYKAKLA TARFYFAKLLPETAMTIRQARAGSKSMMEVDEALF >Mature_594_residues GQYAAPLRDMQFVLHELLNVEAEIRQMPKHADLDADTINAVLEEAGKFCSEVLFPLNHSGDQEGCTYVGDGVVTTPKGFK EAYAQYVEAGWPALGCDPEYGGQGLPAFVNNALYEMLNSANQAWTMYPGLSHGAYECLHAHGTPELQQRYLPKLVAGVWT GTMCLTEPHCGTDLGILRTKAEPNSDGSYAISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFVPNEA GEPGERNGVKCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEVAYQNSLVYAKE RLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTQKAYAEGARAFSYWSALHIDKELSHADESVRKEAADLVALLTPILKAF LSDNAFEGTNHAMQIYGGHGFIAEWGMEQYVRDARINMIYEGTNAIQALDLLGRKILGDMGAKMKKFGKLVAEFVEAEGV KPEMQEFINPLADIGEKVQKLMMEIGMKAMQNPDEVGAAAVPYLRTVGHLVFSYFWARMARIALDKEASGDPFYKAKLAT ARFYFAKLLPETAMTIRQARAGSKSMMEVDEALF
Specific function: Unknown
COG id: COG1960
COG function: function code I; Acyl-CoA dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyl-CoA dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4501859, Length=415, Percent_Identity=27.710843373494, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI21361497, Length=429, Percent_Identity=26.3403263403263, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI7656849, Length=367, Percent_Identity=25.8855585831063, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI4557233, Length=316, Percent_Identity=29.4303797468354, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI76496475, Length=420, Percent_Identity=26.9047619047619, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI4557235, Length=420, Percent_Identity=26.9047619047619, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI226958412, Length=447, Percent_Identity=23.9373601789709, Blast_Score=94, Evalue=4e-19, Organism=Homo sapiens, GI4501857, Length=324, Percent_Identity=27.7777777777778, Blast_Score=93, Evalue=7e-19, Organism=Homo sapiens, GI226958414, Length=396, Percent_Identity=23.989898989899, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI4557231, Length=356, Percent_Identity=28.6516853932584, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI187960098, Length=356, Percent_Identity=28.6516853932584, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI4503943, Length=351, Percent_Identity=27.6353276353276, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI7669494, Length=192, Percent_Identity=30.7291666666667, Blast_Score=66, Evalue=7e-11, Organism=Escherichia coli, GI87082384, Length=410, Percent_Identity=25.8536585365854, Blast_Score=116, Evalue=4e-27, Organism=Caenorhabditis elegans, GI17508101, Length=364, Percent_Identity=28.5714285714286, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17533517, Length=423, Percent_Identity=26.9503546099291, Blast_Score=122, Evalue=6e-28, Organism=Caenorhabditis elegans, GI17569725, Length=370, Percent_Identity=29.7297297297297, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17534899, Length=367, Percent_Identity=29.9727520435967, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71985184, Length=377, Percent_Identity=28.3819628647215, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17506239, Length=364, Percent_Identity=26.6483516483516, Blast_Score=108, Evalue=8e-24, Organism=Caenorhabditis elegans, GI86563383, Length=373, Percent_Identity=26.2734584450402, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI86563381, Length=373, Percent_Identity=26.2734584450402, Blast_Score=96, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17538396, Length=367, Percent_Identity=25.3405994550409, Blast_Score=95, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17570075, Length=385, Percent_Identity=26.2337662337662, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI71990804, Length=186, Percent_Identity=33.3333333333333, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI32563615, Length=230, Percent_Identity=28.2608695652174, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71985192, Length=252, Percent_Identity=30.1587301587302, Blast_Score=83, Evalue=5e-16, Organism=Caenorhabditis elegans, GI71982178, Length=237, Percent_Identity=28.2700421940928, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI281363737, Length=459, Percent_Identity=25.4901960784314, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI24666513, Length=380, Percent_Identity=27.8947368421053, Blast_Score=108, Evalue=8e-24, Organism=Drosophila melanogaster, GI21356377, Length=373, Percent_Identity=26.2734584450402, Blast_Score=104, Evalue=2e-22, Organism=Drosophila melanogaster, GI24646207, Length=383, Percent_Identity=25.5874673629243, Blast_Score=102, Evalue=1e-21, Organism=Drosophila melanogaster, GI24660351, Length=314, Percent_Identity=28.0254777070064, Blast_Score=93, Evalue=5e-19, Organism=Drosophila melanogaster, GI21355753, Length=377, Percent_Identity=25.4641909814324, Blast_Score=92, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006089 - InterPro: IPR006092 - InterPro: IPR006090 - InterPro: IPR006091 - InterPro: IPR009075 - InterPro: IPR013786 - InterPro: IPR009100 [H]
Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]
EC number: NA
Molecular weight: Translated: 65131; Mature: 64999
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQYAAPLRDMQFVLHELLNVEAEIRQMPKHADLDADTINAVLEEAGKFCSEVLFPLNHS CCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC GDQEGCTYVGDGVVTTPKGFKEAYAQYVEAGWPALGCDPEYGGQGLPAFVNNALYEMLNS CCCCCCEEECCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC ANQAWTMYPGLSHGAYECLHAHGTPELQQRYLPKLVAGVWTGTMCLTEPHCGTDLGILRT CCCCEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEE KAEPNSDGSYAISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFVPNE CCCCCCCCCEEEECEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCC AGEPGERNGVKCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGV CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHCC GMQSLGLTEVAYQNSLVYAKERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTQKAYAEG CHHHCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHH ARAFSYWSALHIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC GFIAEWGMEQYVRDARINMIYEGTNAIQALDLLGRKILGDMGAKMKKFGKLVAEFVEAEG CHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VKPEMQEFINPLADIGEKVQKLMMEIGMKAMQNPDEVGAAAVPYLRTVGHLVFSYFWARM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHH ARIALDKEASGDPFYKAKLATARFYFAKLLPETAMTIRQARAGSKSMMEVDEALF HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure GQYAAPLRDMQFVLHELLNVEAEIRQMPKHADLDADTINAVLEEAGKFCSEVLFPLNHS CCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC GDQEGCTYVGDGVVTTPKGFKEAYAQYVEAGWPALGCDPEYGGQGLPAFVNNALYEMLNS CCCCCCEEECCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC ANQAWTMYPGLSHGAYECLHAHGTPELQQRYLPKLVAGVWTGTMCLTEPHCGTDLGILRT CCCCEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEE KAEPNSDGSYAISGTKIFISSGEHDLAENIVHLVLARLPDAPKGTKGISLFIVPKFVPNE CCCCCCCCCEEEECEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCC AGEPGERNGVKCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGV CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHCC GMQSLGLTEVAYQNSLVYAKERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTQKAYAEG CHHHCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHH ARAFSYWSALHIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFEGTNHAMQIYGGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC GFIAEWGMEQYVRDARINMIYEGTNAIQALDLLGRKILGDMGAKMKKFGKLVAEFVEAEG CHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VKPEMQEFINPLADIGEKVQKLMMEIGMKAMQNPDEVGAAAVPYLRTVGHLVFSYFWARM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHH ARIALDKEASGDPFYKAKLATARFYFAKLLPETAMTIRQARAGSKSMMEVDEALF HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8759838; 8969508; 9384377 [H]