Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is 91781793

Identifier: 91781793

GI number: 91781793

Start: 456919

End: 457347

Strand: Direct

Name: 91781793

Synonym: Bxe_A4052

Alternate gene names: NA

Gene position: 456919-457347 (Clockwise)

Preceding gene: 91781792

Following gene: 91781794

Centisome position: 9.33

GC content: 63.64

Gene sequence:

>429_bases
ATGGACTGCGTTTTTTGCCGTGAAGATGGCGGCGATGTGCTGTGGCACGACGACACGCTGCGTGTCGTCCTAGCCGACGA
ACACGATTACCCGGGCTTTTGCCGGGTGATCTGGAACGGCCATGTCGCCGAATTTTCCGACCTCGACGGAAACGACCGCG
ATCGCGTGATGAAGGCCGTGTATGCGGTCGAGCGCGCGATCCGGCGCATCCTTCAGCCGGCAAAGGTGAACCTGGCGAGC
CTCGGCAACCAGGTGCCGCATGTGCACTGGCATGTGATCCCGCGTTTTTCGAACGACGCTCATTTTCCGCTGCCCATCTG
GGCGCCGCGCCAGCGCACGGTGTCCGAAGCCATGCTGTCGTCGCGCCGCGCGCAAGCCACCCTGCTGCGCGAAGCGGTGC
GGCAGGAAATCGAACAGGCGCTGGGTTGA

Upstream 100 bases:

>100_bases
GAAGACTGGATGGTCGACTACGTGCAACGGGCGAACAATGGCGGAATCGAGCGCGTGCTGGTTTAATGGCACGACCGACG
ATTTCTGCCTGAGGACGACG

Downstream 100 bases:

>100_bases
GCGCCCGCCAACCTGGCGCGTCGCGCTACGCGTCCGGGCGCGCGGGAAGACTTGAGACGGCGTTTTCTATGAGGTCAATA
TGAGTGGTCTGACTCCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Histidine Triad Family Protein; HIT Family Protein; HIT Family Hydrolase; Diadenosine Tetraphosphate Hydrolase; Histidine Triad-Like; Histidine Triad Family Hydrolase; HIT Domain-Containing Protein; HIT Domain-Containing

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MDCVFCREDGGDVLWHDDTLRVVLADEHDYPGFCRVIWNGHVAEFSDLDGNDRDRVMKAVYAVERAIRRILQPAKVNLAS
LGNQVPHVHWHVIPRFSNDAHFPLPIWAPRQRTVSEAMLSSRRAQATLLREAVRQEIEQALG

Sequences:

>Translated_142_residues
MDCVFCREDGGDVLWHDDTLRVVLADEHDYPGFCRVIWNGHVAEFSDLDGNDRDRVMKAVYAVERAIRRILQPAKVNLAS
LGNQVPHVHWHVIPRFSNDAHFPLPIWAPRQRTVSEAMLSSRRAQATLLREAVRQEIEQALG
>Mature_142_residues
MDCVFCREDGGDVLWHDDTLRVVLADEHDYPGFCRVIWNGHVAEFSDLDGNDRDRVMKAVYAVERAIRRILQPAKVNLAS
LGNQVPHVHWHVIPRFSNDAHFPLPIWAPRQRTVSEAMLSSRRAQATLLREAVRQEIEQALG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16265; Mature: 16265

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCVFCREDGGDVLWHDDTLRVVLADEHDYPGFCRVIWNGHVAEFSDLDGNDRDRVMKAV
CCEEEEECCCCCEEEECCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH
YAVERAIRRILQPAKVNLASLGNQVPHVHWHVIPRFSNDAHFPLPIWAPRQRTVSEAMLS
HHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
SRRAQATLLREAVRQEIEQALG
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDCVFCREDGGDVLWHDDTLRVVLADEHDYPGFCRVIWNGHVAEFSDLDGNDRDRVMKAV
CCEEEEECCCCCEEEECCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH
YAVERAIRRILQPAKVNLASLGNQVPHVHWHVIPRFSNDAHFPLPIWAPRQRTVSEAMLS
HHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
SRRAQATLLREAVRQEIEQALG
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA