| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is queF [H]
Identifier: 91781789
GI number: 91781789
Start: 449005
End: 449829
Strand: Reverse
Name: queF [H]
Synonym: Bxe_A4056
Alternate gene names: 91781789
Gene position: 449829-449005 (Counterclockwise)
Preceding gene: 91781790
Following gene: 91781785
Centisome position: 9.19
GC content: 59.15
Gene sequence:
>825_bases ATGACACCCGAACAATCCCCGCTGGGTAAGGCCTCCACTTACACCGAACAATACGACGCGTCGCTGCTGTTTCCGATCGC GCGAAAAAATGCGCGCGAGGCGATCGGCATCGGCGCGCAGTTGCCGTTCTTCGGCACGGACATCTGGAATGCCTACGAAC TGTCCTGGCTGAATGCGCGCGGCAAGCCGCAAATCGCGGTGGCGACTTTCTTCGTGCCGGCGGATTCGCCGAATATCGTC GAATCCAAGTCGTTCAAGCTTTATCTCGGCTCGTTCGCGCAGACCGCTTTCGAGTCGATGGACGCCGTACGCGACACGAT CAGGCGCGATGTGTCCGCGTCGTGCGGCGCGACGGTTTCCGTTCATCTAACGGCGCCGTACAAGTTCGGCAAATTGCAGA TGGAAGAATTCGAAGGCTTGTCGCTGGACCGGCTGGATCTGGACACCGACGTTTATCAGCCGGACGCGTCTTTGCTGAAG GCGGCACTGCATGAAGCGCCGGTCGAAGAAACGGTGTTTTCCAACTTGCTGAAGTCGAATTGCCCGGTAACGGGGCAGCC GGATTGGGGCAGCGTGCAGATTCATTACGTGGGCCCGCAGATCGATCACGCAGGCTTGCTGCGCTACATCATCTCGTACC GGAATCACACCGGCTTTCACGAGCAATGTGTCGAGCGGATTTTCGTCGACGTGCTGAAGGCCTGCAAGCCGGTGAAGCTT GCGGTGTACGCGCGTTATACGCGGCGCGGCGGGCTGGACATCAATCCGTTCCGCACGAATTACAACTTGCCGATGCCGGA CAATATGCGGCTCGCGCGGCAGTAA
Upstream 100 bases:
>100_bases TCGAGCCGGACTTTTTCTTCGACGACCAAATTGGCCACTGCGAATCGGCCCGCGTCGTGACGGCGACGGGGCATGTGATG AGTGGCATCGTGAACGCATC
Downstream 100 bases:
>100_bases GAAAAGCAGGTTGTTCGCCGCGCCGAGTCGATGCGAATTTGCGGCGAACGAACCGGCTGAATGTGCAGGCTTAGGCCGTG GGCTTCTTATAAGCCACGCA
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase [H]
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTPEQSPLGKASTYTEQYDASLLFPIARKNAREAIGIGAQLPFFGTDIWNAYELSWLNARGKPQIAVATFFVPADSPNIV ESKSFKLYLGSFAQTAFESMDAVRDTIRRDVSASCGATVSVHLTAPYKFGKLQMEEFEGLSLDRLDLDTDVYQPDASLLK AALHEAPVEETVFSNLLKSNCPVTGQPDWGSVQIHYVGPQIDHAGLLRYIISYRNHTGFHEQCVERIFVDVLKACKPVKL AVYARYTRRGGLDINPFRTNYNLPMPDNMRLARQ
Sequences:
>Translated_274_residues MTPEQSPLGKASTYTEQYDASLLFPIARKNAREAIGIGAQLPFFGTDIWNAYELSWLNARGKPQIAVATFFVPADSPNIV ESKSFKLYLGSFAQTAFESMDAVRDTIRRDVSASCGATVSVHLTAPYKFGKLQMEEFEGLSLDRLDLDTDVYQPDASLLK AALHEAPVEETVFSNLLKSNCPVTGQPDWGSVQIHYVGPQIDHAGLLRYIISYRNHTGFHEQCVERIFVDVLKACKPVKL AVYARYTRRGGLDINPFRTNYNLPMPDNMRLARQ >Mature_273_residues TPEQSPLGKASTYTEQYDASLLFPIARKNAREAIGIGAQLPFFGTDIWNAYELSWLNARGKPQIAVATFFVPADSPNIVE SKSFKLYLGSFAQTAFESMDAVRDTIRRDVSASCGATVSVHLTAPYKFGKLQMEEFEGLSLDRLDLDTDVYQPDASLLKA ALHEAPVEETVFSNLLKSNCPVTGQPDWGSVQIHYVGPQIDHAGLLRYIISYRNHTGFHEQCVERIFVDVLKACKPVKLA VYARYTRRGGLDINPFRTNYNLPMPDNMRLARQ
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) [H]
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789158, Length=272, Percent_Identity=52.2058823529412, Blast_Score=274, Evalue=5e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016428 - InterPro: IPR020602 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =1.7.1.13 [H]
Molecular weight: Translated: 30659; Mature: 30528
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPEQSPLGKASTYTEQYDASLLFPIARKNAREAIGIGAQLPFFGTDIWNAYELSWLNAR CCCCCCCCCCCHHHHHHHCCEEEEHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCC GKPQIAVATFFVPADSPNIVESKSFKLYLGSFAQTAFESMDAVRDTIRRDVSASCGATVS CCCCEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE VHLTAPYKFGKLQMEEFEGLSLDRLDLDTDVYQPDASLLKAALHEAPVEETVFSNLLKSN EEEECCCCCCCEEHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCC CPVTGQPDWGSVQIHYVGPQIDHAGLLRYIISYRNHTGFHEQCVERIFVDVLKACKPVKL CCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEE AVYARYTRRGGLDINPFRTNYNLPMPDNMRLARQ EEEEEHHHCCCCCCCCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure TPEQSPLGKASTYTEQYDASLLFPIARKNAREAIGIGAQLPFFGTDIWNAYELSWLNAR CCCCCCCCCCHHHHHHHCCEEEEHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCC GKPQIAVATFFVPADSPNIVESKSFKLYLGSFAQTAFESMDAVRDTIRRDVSASCGATVS CCCCEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE VHLTAPYKFGKLQMEEFEGLSLDRLDLDTDVYQPDASLLKAALHEAPVEETVFSNLLKSN EEEECCCCCCCEEHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCC CPVTGQPDWGSVQIHYVGPQIDHAGLLRYIISYRNHTGFHEQCVERIFVDVLKACKPVKL CCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEE AVYARYTRRGGLDINPFRTNYNLPMPDNMRLARQ EEEEEHHHCCCCCCCCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA