Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is adhB [H]

Identifier: 91781770

GI number: 91781770

Start: 426347

End: 427753

Strand: Reverse

Name: adhB [H]

Synonym: Bxe_A4075

Alternate gene names: 91781770

Gene position: 427753-426347 (Counterclockwise)

Preceding gene: 91781771

Following gene: 91781769

Centisome position: 8.74

GC content: 65.67

Gene sequence:

>1407_bases
ATGAAGCCGACACTTCGCACTCCGGGTTCTTTGCGCGCGCTGCGCACCACTTTGCTCGACACCTGGTTCACCGCGACGAA
GCGTCGGCGCAGTCGGCGCACGCGGGCACCGCTCGTGTCCGGCCTGCTGATTGCCGGCCTGATCGTGGCCGGCAGCGCCG
CGCTTCTGCGCGCATCGCATACGCCGCTGATCGCCGAAGCACGCGCCGCCGACACCACGGCATCCGCGCCGGGCGCCAGT
GCCGACACGCGCCCCGACCTCGTCAAACGCGGCGAGTATCTGGCGCGCGCCGGCGACTGCGTCGCCTGCCATACGGCGCC
GCGCGGCAAACTGTTCGCGGGCGGCCTCGCCATGGAAACGCCGTTCGGCACGCTGTATTCGCCGAACATCACCCCGGACG
CGCAATACGGCATCGGCACCTGGAGTCAGGACGCGTTCTTCAAGATGATGCGCACCGGCCGCACGCCGGACGGCACGCTC
ATCTATCCGGCCATGCCGATCGCCCAGTACACCAAGGTCACGCGCCAGGACTCGGACGCGATCTTCGCCTATCTGCAAAC
CGTCGCGCCGGTACGCGAGCCGAACCACAAGCACACGCTGCGTTTCCCCTTCAATCAGCGCAACCTGCTGTACGGCTGGC
GCACGCTGTATTTCCGCGAGGGCGAGTTCCAGCCCGATCCGACCAAATCCGTCGAATGGAACCGCGGTGCGTATCTGGTC
GAAGGGCTCGGTCACTGCACGATGTGCCACACCAAGATCAACATGCTCGGCGGTTCGTCGCAAAGCGAACAGTTCGCGGG
CGGTCTGATCCCCGTGCAGAACTGGTACGCGCCGTCGCTGACTTCGGACAAGGACGGCGGCCTCGGCGACTGGAGCATCA
AGGACATCGTCGATCTGCTGCAAGCGGGCATTTCCGATCGCGGCGCCGTGTACGGGCCGATGGCCGAAGTCACGTACCAC
AGCCTTCAGTACATGACGGAAGAGGACGTCAAGTCGATGGCCGTCTACCTGAAGACCTTGCCGGACAAGAGCGGCCGCAA
GTCCGGGCCGTCGGCGCCGACCAACACCAGTGTGTTCGCGCTCGGCGAAAAAATCTACGCCGACAAATGCGCGCTCTGCC
ACGGCGCAAAGGGCGAAGGAAAGTTGCAGCACTACCCGCCGCTCGCCGGCAACCAGTCGATTGAAATGGACTCCTCGGTC
AACCCGATTCGCATCGTGCTGAACGGCGGGTTCCCGCCGGGCACGATGCGCAATCCGGAACCGTACGGCATGCCGCCGTT
CGGCCAGGAACTGAACGACGCCGACGCCGCCGCCGTGGTCACCTATATCCGCACCGCGTGGGGCAATCACGGCCAGCCCG
TGACGTCGCGCGAGGTCAACGAGTTGCGCAACGCACCGCTGCATTGA

Upstream 100 bases:

>100_bases
CCGTATCGAGCTGGCTCGCACGCCAGCCGCGTCCGGCTGACCCTCGCCCCGCGCCTGCGTCCGGAGAGCGGCTGCCTCTC
GCCTGCGGGAGCCAACCGCA

Downstream 100 bases:

>100_bases
ACCGCCGCACTGGAGAACCTTTAGATGGAAGCAAACGATACCGGTAGCGCGGCCCCACCCACGGACGAAGAAGTGGAACG
CGTCGTCGCGGCCGGCCCGC

Product: putative cytochrome c precursor

Products: NA

Alternate protein names: Cytochrome c-553; Cytochrome c553; G3-ADH subunit II [H]

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MKPTLRTPGSLRALRTTLLDTWFTATKRRRSRRTRAPLVSGLLIAGLIVAGSAALLRASHTPLIAEARAADTTASAPGAS
ADTRPDLVKRGEYLARAGDCVACHTAPRGKLFAGGLAMETPFGTLYSPNITPDAQYGIGTWSQDAFFKMMRTGRTPDGTL
IYPAMPIAQYTKVTRQDSDAIFAYLQTVAPVREPNHKHTLRFPFNQRNLLYGWRTLYFREGEFQPDPTKSVEWNRGAYLV
EGLGHCTMCHTKINMLGGSSQSEQFAGGLIPVQNWYAPSLTSDKDGGLGDWSIKDIVDLLQAGISDRGAVYGPMAEVTYH
SLQYMTEEDVKSMAVYLKTLPDKSGRKSGPSAPTNTSVFALGEKIYADKCALCHGAKGEGKLQHYPPLAGNQSIEMDSSV
NPIRIVLNGGFPPGTMRNPEPYGMPPFGQELNDADAAAVVTYIRTAWGNHGQPVTSREVNELRNAPLH

Sequences:

>Translated_468_residues
MKPTLRTPGSLRALRTTLLDTWFTATKRRRSRRTRAPLVSGLLIAGLIVAGSAALLRASHTPLIAEARAADTTASAPGAS
ADTRPDLVKRGEYLARAGDCVACHTAPRGKLFAGGLAMETPFGTLYSPNITPDAQYGIGTWSQDAFFKMMRTGRTPDGTL
IYPAMPIAQYTKVTRQDSDAIFAYLQTVAPVREPNHKHTLRFPFNQRNLLYGWRTLYFREGEFQPDPTKSVEWNRGAYLV
EGLGHCTMCHTKINMLGGSSQSEQFAGGLIPVQNWYAPSLTSDKDGGLGDWSIKDIVDLLQAGISDRGAVYGPMAEVTYH
SLQYMTEEDVKSMAVYLKTLPDKSGRKSGPSAPTNTSVFALGEKIYADKCALCHGAKGEGKLQHYPPLAGNQSIEMDSSV
NPIRIVLNGGFPPGTMRNPEPYGMPPFGQELNDADAAAVVTYIRTAWGNHGQPVTSREVNELRNAPLH
>Mature_468_residues
MKPTLRTPGSLRALRTTLLDTWFTATKRRRSRRTRAPLVSGLLIAGLIVAGSAALLRASHTPLIAEARAADTTASAPGAS
ADTRPDLVKRGEYLARAGDCVACHTAPRGKLFAGGLAMETPFGTLYSPNITPDAQYGIGTWSQDAFFKMMRTGRTPDGTL
IYPAMPIAQYTKVTRQDSDAIFAYLQTVAPVREPNHKHTLRFPFNQRNLLYGWRTLYFREGEFQPDPTKSVEWNRGAYLV
EGLGHCTMCHTKINMLGGSSQSEQFAGGLIPVQNWYAPSLTSDKDGGLGDWSIKDIVDLLQAGISDRGAVYGPMAEVTYH
SLQYMTEEDVKSMAVYLKTLPDKSGRKSGPSAPTNTSVFALGEKIYADKCALCHGAKGEGKLQHYPPLAGNQSIEMDSSV
NPIRIVLNGGFPPGTMRNPEPYGMPPFGQELNDADAAAVVTYIRTAWGNHGQPVTSREVNELRNAPLH

Specific function: Dehydration of primary alcohols (exception:methanol) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168
- InterPro:   IPR014353 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 50977; Mature: 50977

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTLRTPGSLRALRTTLLDTWFTATKRRRSRRTRAPLVSGLLIAGLIVAGSAALLRASH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC
TPLIAEARAADTTASAPGASADTRPDLVKRGEYLARAGDCVACHTAPRGKLFAGGLAMET
CCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEECCEEEEC
PFGTLYSPNITPDAQYGIGTWSQDAFFKMMRTGRTPDGTLIYPAMPIAQYTKVTRQDSDA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCCHH
IFAYLQTVAPVREPNHKHTLRFPFNQRNLLYGWRTLYFREGEFQPDPTKSVEWNRGAYLV
HHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEE
EGLGHCTMCHTKINMLGGSSQSEQFAGGLIPVQNWYAPSLTSDKDGGLGDWSIKDIVDLL
CCCCCCEEHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
QAGISDRGAVYGPMAEVTYHSLQYMTEEDVKSMAVYLKTLPDKSGRKSGPSAPTNTSVFA
HHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
LGEKIYADKCALCHGAKGEGKLQHYPPLAGNQSIEMDSSVNPIRIVLNGGFPPGTMRNPE
ECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCCC
PYGMPPFGQELNDADAAAVVTYIRTAWGNHGQPVTSREVNELRNAPLH
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MKPTLRTPGSLRALRTTLLDTWFTATKRRRSRRTRAPLVSGLLIAGLIVAGSAALLRASH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC
TPLIAEARAADTTASAPGASADTRPDLVKRGEYLARAGDCVACHTAPRGKLFAGGLAMET
CCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEECCEEEEC
PFGTLYSPNITPDAQYGIGTWSQDAFFKMMRTGRTPDGTLIYPAMPIAQYTKVTRQDSDA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCCHH
IFAYLQTVAPVREPNHKHTLRFPFNQRNLLYGWRTLYFREGEFQPDPTKSVEWNRGAYLV
HHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEE
EGLGHCTMCHTKINMLGGSSQSEQFAGGLIPVQNWYAPSLTSDKDGGLGDWSIKDIVDLL
CCCCCCEEHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
QAGISDRGAVYGPMAEVTYHSLQYMTEEDVKSMAVYLKTLPDKSGRKSGPSAPTNTSVFA
HHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
LGEKIYADKCALCHGAKGEGKLQHYPPLAGNQSIEMDSSVNPIRIVLNGGFPPGTMRNPE
ECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCCC
PYGMPPFGQELNDADAAAVVTYIRTAWGNHGQPVTSREVNELRNAPLH
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9055427 [H]