| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is adhB [H]
Identifier: 91781770
GI number: 91781770
Start: 426347
End: 427753
Strand: Reverse
Name: adhB [H]
Synonym: Bxe_A4075
Alternate gene names: 91781770
Gene position: 427753-426347 (Counterclockwise)
Preceding gene: 91781771
Following gene: 91781769
Centisome position: 8.74
GC content: 65.67
Gene sequence:
>1407_bases ATGAAGCCGACACTTCGCACTCCGGGTTCTTTGCGCGCGCTGCGCACCACTTTGCTCGACACCTGGTTCACCGCGACGAA GCGTCGGCGCAGTCGGCGCACGCGGGCACCGCTCGTGTCCGGCCTGCTGATTGCCGGCCTGATCGTGGCCGGCAGCGCCG CGCTTCTGCGCGCATCGCATACGCCGCTGATCGCCGAAGCACGCGCCGCCGACACCACGGCATCCGCGCCGGGCGCCAGT GCCGACACGCGCCCCGACCTCGTCAAACGCGGCGAGTATCTGGCGCGCGCCGGCGACTGCGTCGCCTGCCATACGGCGCC GCGCGGCAAACTGTTCGCGGGCGGCCTCGCCATGGAAACGCCGTTCGGCACGCTGTATTCGCCGAACATCACCCCGGACG CGCAATACGGCATCGGCACCTGGAGTCAGGACGCGTTCTTCAAGATGATGCGCACCGGCCGCACGCCGGACGGCACGCTC ATCTATCCGGCCATGCCGATCGCCCAGTACACCAAGGTCACGCGCCAGGACTCGGACGCGATCTTCGCCTATCTGCAAAC CGTCGCGCCGGTACGCGAGCCGAACCACAAGCACACGCTGCGTTTCCCCTTCAATCAGCGCAACCTGCTGTACGGCTGGC GCACGCTGTATTTCCGCGAGGGCGAGTTCCAGCCCGATCCGACCAAATCCGTCGAATGGAACCGCGGTGCGTATCTGGTC GAAGGGCTCGGTCACTGCACGATGTGCCACACCAAGATCAACATGCTCGGCGGTTCGTCGCAAAGCGAACAGTTCGCGGG CGGTCTGATCCCCGTGCAGAACTGGTACGCGCCGTCGCTGACTTCGGACAAGGACGGCGGCCTCGGCGACTGGAGCATCA AGGACATCGTCGATCTGCTGCAAGCGGGCATTTCCGATCGCGGCGCCGTGTACGGGCCGATGGCCGAAGTCACGTACCAC AGCCTTCAGTACATGACGGAAGAGGACGTCAAGTCGATGGCCGTCTACCTGAAGACCTTGCCGGACAAGAGCGGCCGCAA GTCCGGGCCGTCGGCGCCGACCAACACCAGTGTGTTCGCGCTCGGCGAAAAAATCTACGCCGACAAATGCGCGCTCTGCC ACGGCGCAAAGGGCGAAGGAAAGTTGCAGCACTACCCGCCGCTCGCCGGCAACCAGTCGATTGAAATGGACTCCTCGGTC AACCCGATTCGCATCGTGCTGAACGGCGGGTTCCCGCCGGGCACGATGCGCAATCCGGAACCGTACGGCATGCCGCCGTT CGGCCAGGAACTGAACGACGCCGACGCCGCCGCCGTGGTCACCTATATCCGCACCGCGTGGGGCAATCACGGCCAGCCCG TGACGTCGCGCGAGGTCAACGAGTTGCGCAACGCACCGCTGCATTGA
Upstream 100 bases:
>100_bases CCGTATCGAGCTGGCTCGCACGCCAGCCGCGTCCGGCTGACCCTCGCCCCGCGCCTGCGTCCGGAGAGCGGCTGCCTCTC GCCTGCGGGAGCCAACCGCA
Downstream 100 bases:
>100_bases ACCGCCGCACTGGAGAACCTTTAGATGGAAGCAAACGATACCGGTAGCGCGGCCCCACCCACGGACGAAGAAGTGGAACG CGTCGTCGCGGCCGGCCCGC
Product: putative cytochrome c precursor
Products: NA
Alternate protein names: Cytochrome c-553; Cytochrome c553; G3-ADH subunit II [H]
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MKPTLRTPGSLRALRTTLLDTWFTATKRRRSRRTRAPLVSGLLIAGLIVAGSAALLRASHTPLIAEARAADTTASAPGAS ADTRPDLVKRGEYLARAGDCVACHTAPRGKLFAGGLAMETPFGTLYSPNITPDAQYGIGTWSQDAFFKMMRTGRTPDGTL IYPAMPIAQYTKVTRQDSDAIFAYLQTVAPVREPNHKHTLRFPFNQRNLLYGWRTLYFREGEFQPDPTKSVEWNRGAYLV EGLGHCTMCHTKINMLGGSSQSEQFAGGLIPVQNWYAPSLTSDKDGGLGDWSIKDIVDLLQAGISDRGAVYGPMAEVTYH SLQYMTEEDVKSMAVYLKTLPDKSGRKSGPSAPTNTSVFALGEKIYADKCALCHGAKGEGKLQHYPPLAGNQSIEMDSSV NPIRIVLNGGFPPGTMRNPEPYGMPPFGQELNDADAAAVVTYIRTAWGNHGQPVTSREVNELRNAPLH
Sequences:
>Translated_468_residues MKPTLRTPGSLRALRTTLLDTWFTATKRRRSRRTRAPLVSGLLIAGLIVAGSAALLRASHTPLIAEARAADTTASAPGAS ADTRPDLVKRGEYLARAGDCVACHTAPRGKLFAGGLAMETPFGTLYSPNITPDAQYGIGTWSQDAFFKMMRTGRTPDGTL IYPAMPIAQYTKVTRQDSDAIFAYLQTVAPVREPNHKHTLRFPFNQRNLLYGWRTLYFREGEFQPDPTKSVEWNRGAYLV EGLGHCTMCHTKINMLGGSSQSEQFAGGLIPVQNWYAPSLTSDKDGGLGDWSIKDIVDLLQAGISDRGAVYGPMAEVTYH SLQYMTEEDVKSMAVYLKTLPDKSGRKSGPSAPTNTSVFALGEKIYADKCALCHGAKGEGKLQHYPPLAGNQSIEMDSSV NPIRIVLNGGFPPGTMRNPEPYGMPPFGQELNDADAAAVVTYIRTAWGNHGQPVTSREVNELRNAPLH >Mature_468_residues MKPTLRTPGSLRALRTTLLDTWFTATKRRRSRRTRAPLVSGLLIAGLIVAGSAALLRASHTPLIAEARAADTTASAPGAS ADTRPDLVKRGEYLARAGDCVACHTAPRGKLFAGGLAMETPFGTLYSPNITPDAQYGIGTWSQDAFFKMMRTGRTPDGTL IYPAMPIAQYTKVTRQDSDAIFAYLQTVAPVREPNHKHTLRFPFNQRNLLYGWRTLYFREGEFQPDPTKSVEWNRGAYLV EGLGHCTMCHTKINMLGGSSQSEQFAGGLIPVQNWYAPSLTSDKDGGLGDWSIKDIVDLLQAGISDRGAVYGPMAEVTYH SLQYMTEEDVKSMAVYLKTLPDKSGRKSGPSAPTNTSVFALGEKIYADKCALCHGAKGEGKLQHYPPLAGNQSIEMDSSV NPIRIVLNGGFPPGTMRNPEPYGMPPFGQELNDADAAAVVTYIRTAWGNHGQPVTSREVNELRNAPLH
Specific function: Dehydration of primary alcohols (exception:methanol) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 cytochrome c domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR008168 - InterPro: IPR014353 [H]
Pfam domain/function: PF00034 Cytochrom_C [H]
EC number: NA
Molecular weight: Translated: 50977; Mature: 50977
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTLRTPGSLRALRTTLLDTWFTATKRRRSRRTRAPLVSGLLIAGLIVAGSAALLRASH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC TPLIAEARAADTTASAPGASADTRPDLVKRGEYLARAGDCVACHTAPRGKLFAGGLAMET CCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEECCEEEEC PFGTLYSPNITPDAQYGIGTWSQDAFFKMMRTGRTPDGTLIYPAMPIAQYTKVTRQDSDA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCCHH IFAYLQTVAPVREPNHKHTLRFPFNQRNLLYGWRTLYFREGEFQPDPTKSVEWNRGAYLV HHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEE EGLGHCTMCHTKINMLGGSSQSEQFAGGLIPVQNWYAPSLTSDKDGGLGDWSIKDIVDLL CCCCCCEEHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH QAGISDRGAVYGPMAEVTYHSLQYMTEEDVKSMAVYLKTLPDKSGRKSGPSAPTNTSVFA HHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE LGEKIYADKCALCHGAKGEGKLQHYPPLAGNQSIEMDSSVNPIRIVLNGGFPPGTMRNPE ECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCCC PYGMPPFGQELNDADAAAVVTYIRTAWGNHGQPVTSREVNELRNAPLH CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MKPTLRTPGSLRALRTTLLDTWFTATKRRRSRRTRAPLVSGLLIAGLIVAGSAALLRASH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC TPLIAEARAADTTASAPGASADTRPDLVKRGEYLARAGDCVACHTAPRGKLFAGGLAMET CCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEECCEEEEC PFGTLYSPNITPDAQYGIGTWSQDAFFKMMRTGRTPDGTLIYPAMPIAQYTKVTRQDSDA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCCHH IFAYLQTVAPVREPNHKHTLRFPFNQRNLLYGWRTLYFREGEFQPDPTKSVEWNRGAYLV HHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEE EGLGHCTMCHTKINMLGGSSQSEQFAGGLIPVQNWYAPSLTSDKDGGLGDWSIKDIVDLL CCCCCCEEHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH QAGISDRGAVYGPMAEVTYHSLQYMTEEDVKSMAVYLKTLPDKSGRKSGPSAPTNTSVFA HHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE LGEKIYADKCALCHGAKGEGKLQHYPPLAGNQSIEMDSSVNPIRIVLNGGFPPGTMRNPE ECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCCC PYGMPPFGQELNDADAAAVVTYIRTAWGNHGQPVTSREVNELRNAPLH CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9055427 [H]