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The map label for this gene is kdsC [H]

Identifier: 91781728

GI number: 91781728

Start: 377865

End: 378425

Strand: Reverse

Name: kdsC [H]

Synonym: Bxe_A4118

Alternate gene names: 91781728

Gene position: 378425-377865 (Counterclockwise)

Preceding gene: 91781729

Following gene: 91781727

Centisome position: 7.73

GC content: 66.31

Gene sequence:

>561_bases
ATGGCCCTCGCCCCTGCTACCGCGACCGAGCGCGCAAGCCGCGTCAAGCTGATGATTTTCGACGTCGACGGCGTGCTCAC
CGACGGCGGCCTGCTGTTCACGGCGGAAGGCGACACCATGAAGGGCTTCAATTCGATGGACGGCCACGGCATGAAGCTGC
TGCGCCAGGCCGGCATCGAAACGGCGATCATCACCGGGCGCAAGTCGGGCATCGTGGCGGCACGGGCGAAGGAAATGAAT
ATCACGCACGTCTATCAGGGCGTGCAGGACAAACCCCAGGCGTTCGCGGACCTGTTGCAGCAAACCGGCATGACGGCCGA
AGAATGCGGCTACATGGGCGACGACTGGGTCGATCTCGGCGTGATGCTGAAGGTCGGCTTCGCGGCGGCGCCGGCCAACT
CGCATCCCGAAGTGATCGCGCGGGCCCATTGGGTCAGCGAAGCGCGCGGCGGCCGCGGCGCGGCGCGCGAAGTCTGCGAC
ACGCTGCTGCGTGCACAACATAAGTATGAGGCGTTGCTGGCGGCCGCCTGTAGCGGCGAACAGCGGGGCCTCGTCGGATG
A

Upstream 100 bases:

>100_bases
TGGAGCGCCACCGCATCAATCAGATGCTGGTCGTGGACGAAGCAGGCAAGCTGATCGGCGCACTCAACATGCACGACCTG
TTCTCGAAGAAGGTGATCTG

Downstream 100 bases:

>100_bases
ACCAGTTTCGCCTGACTTCGCTGATTCCGCTGGTCGCGATGGCCGCGCTCGCCGGTATCACGTGGTGGCTGCTGCAAGCC
ACCCTGCCCCGGCAGAACGA

Product: phosphatase YrbI

Products: NA

Alternate protein names: KDO 8-P phosphatase [H]

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MALAPATATERASRVKLMIFDVDGVLTDGGLLFTAEGDTMKGFNSMDGHGMKLLRQAGIETAIITGRKSGIVAARAKEMN
ITHVYQGVQDKPQAFADLLQQTGMTAEECGYMGDDWVDLGVMLKVGFAAAPANSHPEVIARAHWVSEARGGRGAAREVCD
TLLRAQHKYEALLAAACSGEQRGLVG

Sequences:

>Translated_186_residues
MALAPATATERASRVKLMIFDVDGVLTDGGLLFTAEGDTMKGFNSMDGHGMKLLRQAGIETAIITGRKSGIVAARAKEMN
ITHVYQGVQDKPQAFADLLQQTGMTAEECGYMGDDWVDLGVMLKVGFAAAPANSHPEVIARAHWVSEARGGRGAAREVCD
TLLRAQHKYEALLAAACSGEQRGLVG
>Mature_185_residues
ALAPATATERASRVKLMIFDVDGVLTDGGLLFTAEGDTMKGFNSMDGHGMKLLRQAGIETAIITGRKSGIVAARAKEMNI
THVYQGVQDKPQAFADLLQQTGMTAEECGYMGDDWVDLGVMLKVGFAAAPANSHPEVIARAHWVSEARGGRGAAREVCDT
LLRAQHKYEALLAAACSGEQRGLVG

Specific function: Catalyzes the hydrolysis of KDO 8-P to KDO and inorganic phosphate [H]

COG id: COG1778

COG function: function code R; Low specificity phosphatase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdsC family [H]

Homologues:

Organism=Homo sapiens, GI8923900, Length=153, Percent_Identity=24.1830065359477, Blast_Score=69, Evalue=3e-12,
Organism=Escherichia coli, GI2367202, Length=165, Percent_Identity=46.0606060606061, Blast_Score=155, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006549
- InterPro:   IPR010023 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.45 [H]

Molecular weight: Translated: 19749; Mature: 19618

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALAPATATERASRVKLMIFDVDGVLTDGGLLFTAEGDTMKGFNSMDGHGMKLLRQAGIE
CCCCCCCHHHHCCEEEEEEEECCCEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCC
TAIITGRKSGIVAARAKEMNITHVYQGVQDKPQAFADLLQQTGMTAEECGYMGDDWVDLG
EEEEECCCCCEEEEHHHHCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCHHHHH
VMLKVGFAAAPANSHPEVIARAHWVSEARGGRGAAREVCDTLLRAQHKYEALLAAACSGE
HHHHHCCEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
QRGLVG
CCCCCC
>Mature Secondary Structure 
ALAPATATERASRVKLMIFDVDGVLTDGGLLFTAEGDTMKGFNSMDGHGMKLLRQAGIE
CCCCCCHHHHCCEEEEEEEECCCEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCC
TAIITGRKSGIVAARAKEMNITHVYQGVQDKPQAFADLLQQTGMTAEECGYMGDDWVDLG
EEEEECCCCCEEEEHHHHCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCHHHHH
VMLKVGFAAAPANSHPEVIARAHWVSEARGGRGAAREVCDTLLRAQHKYEALLAAACSGE
HHHHHCCEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
QRGLVG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]