| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yhbJ [C]
Identifier: 91781720
GI number: 91781720
Start: 370550
End: 371488
Strand: Reverse
Name: yhbJ [C]
Synonym: Bxe_A4126
Alternate gene names: 91781720
Gene position: 371488-370550 (Counterclockwise)
Preceding gene: 91781721
Following gene: 91781719
Centisome position: 7.59
GC content: 61.02
Gene sequence:
>939_bases ATGGGGACCAGATGCTATGATGAAATCTACGGTTTCGACGACTCCATGCGCATAATCCTGATCACCGGTATATCCGGCTC CGGCAAATCAGTTGCCCTGAACGCGCTTGAAGACGCAGGCTACTACTGCGTCGACAACCTGCCGCCGCGTTTCCTGCCGC AGCTGGCTTCCTATCTCGCCGAAGACGGGCAAGATCGCCTTGCGGTCGCAATCGACGCGCGCTCGAGCGCTTCGCTCGAC GAAATGCCCGCCATGATTCGCGACCTGTCGCGTGCCCACGACGTGCGGGTGCTGTTCCTGAACGCGAGCACACAGTCGCT GATTCAACGCTTTTCCGAAACACGCCGCCGCCATCCGCTGTCCGGTTCAACCTCGCACGACGCGGATGTCGGCCTGCTCA ACTCGCTTGCCGAGGCGATCGAACGCGAACGCGAACTCGTGGCGGGGCTGGCCGAATTCGGCCATCAGATCGACACCAGC AATCTGCGCGCGAACGTGCTGCGCGCCTGGGTCAAACGCTTCATCGAGCAGAAGGATTCCGGGCTCGTGCTGATGTTCGA GTCGTTCGGCTTCAAGCGTGGCGTGCCGCTCGACGCGGATTTCGTGTTCGACGTGCGCACCTTGCCGAACCCGTACTACG ATCATGAATTGCGGCCGCTCACGGGCCTCGACAAACCGGTGATCGATTTTCTGGATGCGCTGCCGGTGGTGCATGAAATG ATCGACGACATCGAGAAATTTCTCGCCAAGTGGCTTCCGCATTTCCGCGACGACAATCGCAGCTATCTCACCGTCGCGAT CGGTTGCACGGGCGGCCAGCACCGCTCGGTGTTCATTGCGGAGACGCTCGCCGCGCGTCTCGCGGCATCGGCGAATGTCA TTGTGCGGCACCGCGATGCGCCGGTCGAAGCCGGCGAATCATCGAAGTTAGTGGCTTAA
Upstream 100 bases:
>100_bases CCTCGCGATGCAAGACCCCGACAGCCAGTTTCCGGGCAAACTGATCTGAGTCGAGAAGACCATGCCGTGACTGCGGCCAG CGGCGGGCGCGGGTACGCGC
Downstream 100 bases:
>100_bases CCGGCCGCATCGCGCGGCCTCAACTCGAAGCGTTGCGCCATGTCTTCTTCTACTGTGCTTGCCGATGTGCCGCTGTTTCC GTTGCATACGGTGCTGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MGTRCYDEIYGFDDSMRIILITGISGSGKSVALNALEDAGYYCVDNLPPRFLPQLASYLAEDGQDRLAVAIDARSSASLD EMPAMIRDLSRAHDVRVLFLNASTQSLIQRFSETRRRHPLSGSTSHDADVGLLNSLAEAIERERELVAGLAEFGHQIDTS NLRANVLRAWVKRFIEQKDSGLVLMFESFGFKRGVPLDADFVFDVRTLPNPYYDHELRPLTGLDKPVIDFLDALPVVHEM IDDIEKFLAKWLPHFRDDNRSYLTVAIGCTGGQHRSVFIAETLAARLAASANVIVRHRDAPVEAGESSKLVA
Sequences:
>Translated_312_residues MGTRCYDEIYGFDDSMRIILITGISGSGKSVALNALEDAGYYCVDNLPPRFLPQLASYLAEDGQDRLAVAIDARSSASLD EMPAMIRDLSRAHDVRVLFLNASTQSLIQRFSETRRRHPLSGSTSHDADVGLLNSLAEAIERERELVAGLAEFGHQIDTS NLRANVLRAWVKRFIEQKDSGLVLMFESFGFKRGVPLDADFVFDVRTLPNPYYDHELRPLTGLDKPVIDFLDALPVVHEM IDDIEKFLAKWLPHFRDDNRSYLTVAIGCTGGQHRSVFIAETLAARLAASANVIVRHRDAPVEAGESSKLVA >Mature_311_residues GTRCYDEIYGFDDSMRIILITGISGSGKSVALNALEDAGYYCVDNLPPRFLPQLASYLAEDGQDRLAVAIDARSSASLDE MPAMIRDLSRAHDVRVLFLNASTQSLIQRFSETRRRHPLSGSTSHDADVGLLNSLAEAIERERELVAGLAEFGHQIDTSN LRANVLRAWVKRFIEQKDSGLVLMFESFGFKRGVPLDADFVFDVRTLPNPYYDHELRPLTGLDKPVIDFLDALPVVHEMI DDIEKFLAKWLPHFRDDNRSYLTVAIGCTGGQHRSVFIAETLAARLAASANVIVRHRDAPVEAGESSKLVA
Specific function: Displays ATPase and GTPase activities [H]
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family [H]
Homologues:
Organism=Escherichia coli, GI1789598, Length=287, Percent_Identity=47.7351916376307, Blast_Score=238, Evalue=5e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005337 [H]
Pfam domain/function: PF03668 ATP_bind_2 [H]
EC number: NA
Molecular weight: Translated: 34678; Mature: 34547
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTRCYDEIYGFDDSMRIILITGISGSGKSVALNALEDAGYYCVDNLPPRFLPQLASYLA CCCCHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEHHCCCEEEECCCCHHHHHHHHHHHH EDGQDRLAVAIDARSSASLDEMPAMIRDLSRAHDVRVLFLNASTQSLIQRFSETRRRHPL HCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCC SGSTSHDADVGLLNSLAEAIERERELVAGLAEFGHQIDTSNLRANVLRAWVKRFIEQKDS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC GLVLMFESFGFKRGVPLDADFVFDVRTLPNPYYDHELRPLTGLDKPVIDFLDALPVVHEM CEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH IDDIEKFLAKWLPHFRDDNRSYLTVAIGCTGGQHRSVFIAETLAARLAASANVIVRHRDA HHHHHHHHHHHCHHHCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHCCCCEEEEECCC PVEAGESSKLVA CCCCCCCCCCCC >Mature Secondary Structure GTRCYDEIYGFDDSMRIILITGISGSGKSVALNALEDAGYYCVDNLPPRFLPQLASYLA CCCHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEHHCCCEEEECCCCHHHHHHHHHHHH EDGQDRLAVAIDARSSASLDEMPAMIRDLSRAHDVRVLFLNASTQSLIQRFSETRRRHPL HCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCC SGSTSHDADVGLLNSLAEAIERERELVAGLAEFGHQIDTSNLRANVLRAWVKRFIEQKDS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC GLVLMFESFGFKRGVPLDADFVFDVRTLPNPYYDHELRPLTGLDKPVIDFLDALPVVHEM CEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH IDDIEKFLAKWLPHFRDDNRSYLTVAIGCTGGQHRSVFIAETLAARLAASANVIVRHRDA HHHHHHHHHHHCHHHCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHCCCCEEEEECCC PVEAGESSKLVA CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA