| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ybiB [H]
Identifier: 91781703
GI number: 91781703
Start: 354822
End: 355793
Strand: Reverse
Name: ybiB [H]
Synonym: Bxe_A4143
Alternate gene names: 91781703
Gene position: 355793-354822 (Counterclockwise)
Preceding gene: 91781706
Following gene: 91781700
Centisome position: 7.27
GC content: 68.72
Gene sequence:
>972_bases ATGACCGACTCCGCCGACACCGCCAACCTCTTCCCCTGCGCCCGCTTCATCAAGGAAATCGGCCGCGGCCCGAACGGCGC CCGCGCGCTGACCGCCGAGGATACCCGCGCGCTCTACACCGCCATGCTCGACGGCCGCGTGGCCGATCTCGAACTCGGCG CGGTGCTGCTCGCCTATCGCGTGAAGGGCGAAACCGCCGACGAACTCGCCGCGATGCTGGCCGGCGCGCATGCATCGTTC GAGCCGGTCCATCTGCCGCACGGCGCGTTTCGGCCGGTGTCGATCCCCACCTACAACGGTGCGCGCAAGCAGCCGAATCT CGTGCCGCTGCTCGCCCTGCTGCTGGCGCGCGAGGGCGTGCCGGTGCTGGTGCATGGCGTAACCGAAGATCCGGGCCGCG TGACGAGCGCGGAAATCTTCACGCATCTGCAAATTCCGCACGCGCAGTCGCACGCCGACATCGAAGATGGTCTCGCCGAG CGCCGTCTCGCGTTTGCGCCGATCGACGTGCTCGCGCCGAAGCTTGCGCGCCTTCTCGCGCTGCGCCGGCGCATGGGCGT GCGTAATTCGACGCACACATTGGTGAAAATCCTGCAACCGTTCGCGCCGGCGGGCTTGCGTCTGGTGAACTACACGCACC CGCCCTATCGCGACAGTCTGACGCAGCTGTTCAACACGCATCCGGACGCGGCCGCCGGCGGCGCGCTGCTCGCGCGCGGC ACCGAAGGCGAAGCGGTGGCCGATACGCGCCGTCAGGTGCAGGTCGACTGGCTGCATGACGGCATCTGCGAAACCCGCGT GCCGCACGAACGCTCGTCACCCGATGCGCCGGAAGTCGACTTGCCCGACGCCAGGGACGCACCGACGACAGCCGCCTGGA TCAGCGCTGTCCTGCGCGGCGAAGCGCCCGTGCCGAGCGCGATTGAACGGCAGGTCGAACTGATCGTGGACGTCGCGAAA ACGCCGGTGTGA
Upstream 100 bases:
>100_bases GCCGGATCGCTATAGATGCGATACTCACACCGGATAGCGTCCCTTGAATACCGTGGCCGACCGCCCTTGGGCGGCGTGCC AATACGTTCCACTCCGCCCG
Downstream 100 bases:
>100_bases CGGCGCGGTATAAGTGCCGGCAGCGGCCCGAACGGATGCGGCGGATAGTCGCGTGCGGGAATGGCGTAGCTCAGGGAAAG CGTCGCTGCTTCGGAATCGG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTDSADTANLFPCARFIKEIGRGPNGARALTAEDTRALYTAMLDGRVADLELGAVLLAYRVKGETADELAAMLAGAHASF EPVHLPHGAFRPVSIPTYNGARKQPNLVPLLALLLAREGVPVLVHGVTEDPGRVTSAEIFTHLQIPHAQSHADIEDGLAE RRLAFAPIDVLAPKLARLLALRRRMGVRNSTHTLVKILQPFAPAGLRLVNYTHPPYRDSLTQLFNTHPDAAAGGALLARG TEGEAVADTRRQVQVDWLHDGICETRVPHERSSPDAPEVDLPDARDAPTTAAWISAVLRGEAPVPSAIERQVELIVDVAK TPV
Sequences:
>Translated_323_residues MTDSADTANLFPCARFIKEIGRGPNGARALTAEDTRALYTAMLDGRVADLELGAVLLAYRVKGETADELAAMLAGAHASF EPVHLPHGAFRPVSIPTYNGARKQPNLVPLLALLLAREGVPVLVHGVTEDPGRVTSAEIFTHLQIPHAQSHADIEDGLAE RRLAFAPIDVLAPKLARLLALRRRMGVRNSTHTLVKILQPFAPAGLRLVNYTHPPYRDSLTQLFNTHPDAAAGGALLARG TEGEAVADTRRQVQVDWLHDGICETRVPHERSSPDAPEVDLPDARDAPTTAAWISAVLRGEAPVPSAIERQVELIVDVAK TPV >Mature_322_residues TDSADTANLFPCARFIKEIGRGPNGARALTAEDTRALYTAMLDGRVADLELGAVLLAYRVKGETADELAAMLAGAHASFE PVHLPHGAFRPVSIPTYNGARKQPNLVPLLALLLAREGVPVLVHGVTEDPGRVTSAEIFTHLQIPHAQSHADIEDGLAER RLAFAPIDVLAPKLARLLALRRRMGVRNSTHTLVKILQPFAPAGLRLVNYTHPPYRDSLTQLFNTHPDAAAGGALLARGT EGEAVADTRRQVQVDWLHDGICETRVPHERSSPDAPEVDLPDARDAPTTAAWISAVLRGEAPVPSAIERQVELIVDVAKT PV
Specific function: Unknown
COG id: COG0547
COG function: function code E; Anthranilate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate phosphoribosyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1787019, Length=300, Percent_Identity=42.3333333333333, Blast_Score=214, Evalue=5e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000312 - InterPro: IPR017459 - InterPro: IPR020072 [H]
Pfam domain/function: PF02885 Glycos_trans_3N [H]
EC number: NA
Molecular weight: Translated: 34777; Mature: 34646
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSADTANLFPCARFIKEIGRGPNGARALTAEDTRALYTAMLDGRVADLELGAVLLAYR CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHC VKGETADELAAMLAGAHASFEPVHLPHGAFRPVSIPTYNGARKQPNLVPLLALLLAREGV CCCCCHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC PVLVHGVTEDPGRVTSAEIFTHLQIPHAQSHADIEDGLAERRLAFAPIDVLAPKLARLLA CEEEECCCCCCCCCHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH LRRRMGVRNSTHTLVKILQPFAPAGLRLVNYTHPPYRDSLTQLFNTHPDAAAGGALLARG HHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEECC TEGEAVADTRRQVQVDWLHDGICETRVPHERSSPDAPEVDLPDARDAPTTAAWISAVLRG CCCCHHHHHHHHEEEHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC EAPVPSAIERQVELIVDVAKTPV CCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDSADTANLFPCARFIKEIGRGPNGARALTAEDTRALYTAMLDGRVADLELGAVLLAYR CCCCCCCHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHC VKGETADELAAMLAGAHASFEPVHLPHGAFRPVSIPTYNGARKQPNLVPLLALLLAREGV CCCCCHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC PVLVHGVTEDPGRVTSAEIFTHLQIPHAQSHADIEDGLAERRLAFAPIDVLAPKLARLLA CEEEECCCCCCCCCHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH LRRRMGVRNSTHTLVKILQPFAPAGLRLVNYTHPPYRDSLTQLFNTHPDAAAGGALLARG HHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEECC TEGEAVADTRRQVQVDWLHDGICETRVPHERSSPDAPEVDLPDARDAPTTAAWISAVLRG CCCCHHHHHHHHEEEHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC EAPVPSAIERQVELIVDVAKTPV CCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503 [H]