Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is ybiB [H]

Identifier: 91781703

GI number: 91781703

Start: 354822

End: 355793

Strand: Reverse

Name: ybiB [H]

Synonym: Bxe_A4143

Alternate gene names: 91781703

Gene position: 355793-354822 (Counterclockwise)

Preceding gene: 91781706

Following gene: 91781700

Centisome position: 7.27

GC content: 68.72

Gene sequence:

>972_bases
ATGACCGACTCCGCCGACACCGCCAACCTCTTCCCCTGCGCCCGCTTCATCAAGGAAATCGGCCGCGGCCCGAACGGCGC
CCGCGCGCTGACCGCCGAGGATACCCGCGCGCTCTACACCGCCATGCTCGACGGCCGCGTGGCCGATCTCGAACTCGGCG
CGGTGCTGCTCGCCTATCGCGTGAAGGGCGAAACCGCCGACGAACTCGCCGCGATGCTGGCCGGCGCGCATGCATCGTTC
GAGCCGGTCCATCTGCCGCACGGCGCGTTTCGGCCGGTGTCGATCCCCACCTACAACGGTGCGCGCAAGCAGCCGAATCT
CGTGCCGCTGCTCGCCCTGCTGCTGGCGCGCGAGGGCGTGCCGGTGCTGGTGCATGGCGTAACCGAAGATCCGGGCCGCG
TGACGAGCGCGGAAATCTTCACGCATCTGCAAATTCCGCACGCGCAGTCGCACGCCGACATCGAAGATGGTCTCGCCGAG
CGCCGTCTCGCGTTTGCGCCGATCGACGTGCTCGCGCCGAAGCTTGCGCGCCTTCTCGCGCTGCGCCGGCGCATGGGCGT
GCGTAATTCGACGCACACATTGGTGAAAATCCTGCAACCGTTCGCGCCGGCGGGCTTGCGTCTGGTGAACTACACGCACC
CGCCCTATCGCGACAGTCTGACGCAGCTGTTCAACACGCATCCGGACGCGGCCGCCGGCGGCGCGCTGCTCGCGCGCGGC
ACCGAAGGCGAAGCGGTGGCCGATACGCGCCGTCAGGTGCAGGTCGACTGGCTGCATGACGGCATCTGCGAAACCCGCGT
GCCGCACGAACGCTCGTCACCCGATGCGCCGGAAGTCGACTTGCCCGACGCCAGGGACGCACCGACGACAGCCGCCTGGA
TCAGCGCTGTCCTGCGCGGCGAAGCGCCCGTGCCGAGCGCGATTGAACGGCAGGTCGAACTGATCGTGGACGTCGCGAAA
ACGCCGGTGTGA

Upstream 100 bases:

>100_bases
GCCGGATCGCTATAGATGCGATACTCACACCGGATAGCGTCCCTTGAATACCGTGGCCGACCGCCCTTGGGCGGCGTGCC
AATACGTTCCACTCCGCCCG

Downstream 100 bases:

>100_bases
CGGCGCGGTATAAGTGCCGGCAGCGGCCCGAACGGATGCGGCGGATAGTCGCGTGCGGGAATGGCGTAGCTCAGGGAAAG
CGTCGCTGCTTCGGAATCGG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MTDSADTANLFPCARFIKEIGRGPNGARALTAEDTRALYTAMLDGRVADLELGAVLLAYRVKGETADELAAMLAGAHASF
EPVHLPHGAFRPVSIPTYNGARKQPNLVPLLALLLAREGVPVLVHGVTEDPGRVTSAEIFTHLQIPHAQSHADIEDGLAE
RRLAFAPIDVLAPKLARLLALRRRMGVRNSTHTLVKILQPFAPAGLRLVNYTHPPYRDSLTQLFNTHPDAAAGGALLARG
TEGEAVADTRRQVQVDWLHDGICETRVPHERSSPDAPEVDLPDARDAPTTAAWISAVLRGEAPVPSAIERQVELIVDVAK
TPV

Sequences:

>Translated_323_residues
MTDSADTANLFPCARFIKEIGRGPNGARALTAEDTRALYTAMLDGRVADLELGAVLLAYRVKGETADELAAMLAGAHASF
EPVHLPHGAFRPVSIPTYNGARKQPNLVPLLALLLAREGVPVLVHGVTEDPGRVTSAEIFTHLQIPHAQSHADIEDGLAE
RRLAFAPIDVLAPKLARLLALRRRMGVRNSTHTLVKILQPFAPAGLRLVNYTHPPYRDSLTQLFNTHPDAAAGGALLARG
TEGEAVADTRRQVQVDWLHDGICETRVPHERSSPDAPEVDLPDARDAPTTAAWISAVLRGEAPVPSAIERQVELIVDVAK
TPV
>Mature_322_residues
TDSADTANLFPCARFIKEIGRGPNGARALTAEDTRALYTAMLDGRVADLELGAVLLAYRVKGETADELAAMLAGAHASFE
PVHLPHGAFRPVSIPTYNGARKQPNLVPLLALLLAREGVPVLVHGVTEDPGRVTSAEIFTHLQIPHAQSHADIEDGLAER
RLAFAPIDVLAPKLARLLALRRRMGVRNSTHTLVKILQPFAPAGLRLVNYTHPPYRDSLTQLFNTHPDAAAGGALLARGT
EGEAVADTRRQVQVDWLHDGICETRVPHERSSPDAPEVDLPDARDAPTTAAWISAVLRGEAPVPSAIERQVELIVDVAKT
PV

Specific function: Unknown

COG id: COG0547

COG function: function code E; Anthranilate phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anthranilate phosphoribosyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1787019, Length=300, Percent_Identity=42.3333333333333, Blast_Score=214, Evalue=5e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000312
- InterPro:   IPR017459
- InterPro:   IPR020072 [H]

Pfam domain/function: PF02885 Glycos_trans_3N [H]

EC number: NA

Molecular weight: Translated: 34777; Mature: 34646

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSADTANLFPCARFIKEIGRGPNGARALTAEDTRALYTAMLDGRVADLELGAVLLAYR
CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHC
VKGETADELAAMLAGAHASFEPVHLPHGAFRPVSIPTYNGARKQPNLVPLLALLLAREGV
CCCCCHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
PVLVHGVTEDPGRVTSAEIFTHLQIPHAQSHADIEDGLAERRLAFAPIDVLAPKLARLLA
CEEEECCCCCCCCCHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
LRRRMGVRNSTHTLVKILQPFAPAGLRLVNYTHPPYRDSLTQLFNTHPDAAAGGALLARG
HHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEECC
TEGEAVADTRRQVQVDWLHDGICETRVPHERSSPDAPEVDLPDARDAPTTAAWISAVLRG
CCCCHHHHHHHHEEEHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
EAPVPSAIERQVELIVDVAKTPV
CCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDSADTANLFPCARFIKEIGRGPNGARALTAEDTRALYTAMLDGRVADLELGAVLLAYR
CCCCCCCHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHC
VKGETADELAAMLAGAHASFEPVHLPHGAFRPVSIPTYNGARKQPNLVPLLALLLAREGV
CCCCCHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
PVLVHGVTEDPGRVTSAEIFTHLQIPHAQSHADIEDGLAERRLAFAPIDVLAPKLARLLA
CEEEECCCCCCCCCHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
LRRRMGVRNSTHTLVKILQPFAPAGLRLVNYTHPPYRDSLTQLFNTHPDAAAGGALLARG
HHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEECC
TEGEAVADTRRQVQVDWLHDGICETRVPHERSSPDAPEVDLPDARDAPTTAAWISAVLRG
CCCCHHHHHHHHEEEHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
EAPVPSAIERQVELIVDVAKTPV
CCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503 [H]