Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is gntX [H]

Identifier: 91781672

GI number: 91781672

Start: 322125

End: 322910

Strand: Reverse

Name: gntX [H]

Synonym: Bxe_A4174

Alternate gene names: 91781672

Gene position: 322910-322125 (Counterclockwise)

Preceding gene: 91781680

Following gene: 91781671

Centisome position: 6.6

GC content: 66.67

Gene sequence:

>786_bases
ATGCCACTCCGGTCCATTTCGTCGTTTTCCGGCAGCCGGTTCGCGCGTTTTGCGCGCGCCGTGCATTCGGCATGGCCGCG
CGTCGCGCAGGTTGCGCTGCCCAATCTGTGTGCGTTATGTGGCAATTTGTCGCATACGACAATTTGCGCCGGTTGCGACG
CGGCCTACTGGAATGAAGAGCGGTTGCGATGCACCGTCTGCGCGGTGCCGCTATCCGTCACGCAATGGGCGGCCCGCACG
CAGTACCGGTGCGCGGATTGCGCCGGCGAGCCGCCGCCGTTCGACGCCACCTTCGCCCTTGCCGACTACCGGGCGCCGCT
CGACACCCTCGCGGTCGGCCTGAAATTCCGCGCCCGCCTGATGCTGGCGCACGAGTTCGGGCAACGCCTTGCGCGTCTTG
CCCAGGACTCGTGGCTGGAGCTTGCCGAATGGCCCGATGTAATCGCGCCCGTGCCGCTTGCCAGAAAACGCCTCGTCGAG
CGCGGCTATAACCAGGCGTGGCAGATCGCGAGGCCATTGGCTCGCGCGCTGCATGTGCGCAGCGACGCAACCTTGCTGCA
TCGGGTGATTCACACCGCGCCGCAGTCGCGGCTCGATCTCGACGCCCGCCGCCTGAACGTAGGCCGCGCTTTCAAGGTTG
CAGGATCCGTGCAAGGCCTGCACGTCGGCATTGTCGACGATGTGATGACGACCGGCGCGACGCTCGAAGCGCTGGCACGC
ACGCTCAAGGCCGCCGGTGCGCGCCAGGTCACCAACTTCGTCGCGCTGCGCACGCCGAAAAACTAG

Upstream 100 bases:

>100_bases
CGGGAGTTGGGGACATGAGTGTCGTGCTGGCGTAGAGCCCGAAGTATACTCGTTCGTTTCCCTCCATTCAGCGTGGAAGG
CCTCCGCGGACAGCCCAGTC

Downstream 100 bases:

>100_bases
TCTCAACCTGAGCTCACCATGTTCAATGTCGTTCTCGTAGAACCGGAAATCCCGCCGAACACCGGCAACGTGATCCGTCT
GTGCGCCAACACCGGCGCCC

Product: putative competence protein f-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MPLRSISSFSGSRFARFARAVHSAWPRVAQVALPNLCALCGNLSHTTICAGCDAAYWNEERLRCTVCAVPLSVTQWAART
QYRCADCAGEPPPFDATFALADYRAPLDTLAVGLKFRARLMLAHEFGQRLARLAQDSWLELAEWPDVIAPVPLARKRLVE
RGYNQAWQIARPLARALHVRSDATLLHRVIHTAPQSRLDLDARRLNVGRAFKVAGSVQGLHVGIVDDVMTTGATLEALAR
TLKAAGARQVTNFVALRTPKN

Sequences:

>Translated_261_residues
MPLRSISSFSGSRFARFARAVHSAWPRVAQVALPNLCALCGNLSHTTICAGCDAAYWNEERLRCTVCAVPLSVTQWAART
QYRCADCAGEPPPFDATFALADYRAPLDTLAVGLKFRARLMLAHEFGQRLARLAQDSWLELAEWPDVIAPVPLARKRLVE
RGYNQAWQIARPLARALHVRSDATLLHRVIHTAPQSRLDLDARRLNVGRAFKVAGSVQGLHVGIVDDVMTTGATLEALAR
TLKAAGARQVTNFVALRTPKN
>Mature_260_residues
PLRSISSFSGSRFARFARAVHSAWPRVAQVALPNLCALCGNLSHTTICAGCDAAYWNEERLRCTVCAVPLSVTQWAARTQ
YRCADCAGEPPPFDATFALADYRAPLDTLAVGLKFRARLMLAHEFGQRLARLAQDSWLELAEWPDVIAPVPLARKRLVER
GYNQAWQIARPLARALHVRSDATLLHRVIHTAPQSRLDLDARRLNVGRAFKVAGSVQGLHVGIVDDVMTTGATLEALART
LKAAGARQVTNFVALRTPKN

Specific function: Could be involved in gluconate metabolism [H]

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family [H]

Homologues:

Organism=Escherichia coli, GI87082263, Length=235, Percent_Identity=34.468085106383, Blast_Score=107, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005222
- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 28688; Mature: 28557

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLRSISSFSGSRFARFARAVHSAWPRVAQVALPNLCALCGNLSHTTICAGCDAAYWNEE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHCCCC
RLRCTVCAVPLSVTQWAARTQYRCADCAGEPPPFDATFALADYRAPLDTLAVGLKFRARL
CEEEEEEECCHHHHHHHHHHCCHHHHCCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHH
MLAHEFGQRLARLAQDSWLELAEWPDVIAPVPLARKRLVERGYNQAWQIARPLARALHVR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC
SDATLLHRVIHTAPQSRLDLDARRLNVGRAFKVAGSVQGLHVGIVDDVMTTGATLEALAR
CHHHHHHHHHHHCCHHHHCCHHHHHCCCHHEECCCCCCCEEEHHHHHHHHCCHHHHHHHH
TLKAAGARQVTNFVALRTPKN
HHHHCCHHHHHHHHEECCCCC
>Mature Secondary Structure 
PLRSISSFSGSRFARFARAVHSAWPRVAQVALPNLCALCGNLSHTTICAGCDAAYWNEE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHCCCC
RLRCTVCAVPLSVTQWAARTQYRCADCAGEPPPFDATFALADYRAPLDTLAVGLKFRARL
CEEEEEEECCHHHHHHHHHHCCHHHHCCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHH
MLAHEFGQRLARLAQDSWLELAEWPDVIAPVPLARKRLVERGYNQAWQIARPLARALHVR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC
SDATLLHRVIHTAPQSRLDLDARRLNVGRAFKVAGSVQGLHVGIVDDVMTTGATLEALAR
CHHHHHHHHHHHCCHHHHCCHHHHHCCCHHEECCCCCCCEEEHHHHHHHHCCHHHHHHHH
TLKAAGARQVTNFVALRTPKN
HHHHCCHHHHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]