| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is gntX [H]
Identifier: 91781672
GI number: 91781672
Start: 322125
End: 322910
Strand: Reverse
Name: gntX [H]
Synonym: Bxe_A4174
Alternate gene names: 91781672
Gene position: 322910-322125 (Counterclockwise)
Preceding gene: 91781680
Following gene: 91781671
Centisome position: 6.6
GC content: 66.67
Gene sequence:
>786_bases ATGCCACTCCGGTCCATTTCGTCGTTTTCCGGCAGCCGGTTCGCGCGTTTTGCGCGCGCCGTGCATTCGGCATGGCCGCG CGTCGCGCAGGTTGCGCTGCCCAATCTGTGTGCGTTATGTGGCAATTTGTCGCATACGACAATTTGCGCCGGTTGCGACG CGGCCTACTGGAATGAAGAGCGGTTGCGATGCACCGTCTGCGCGGTGCCGCTATCCGTCACGCAATGGGCGGCCCGCACG CAGTACCGGTGCGCGGATTGCGCCGGCGAGCCGCCGCCGTTCGACGCCACCTTCGCCCTTGCCGACTACCGGGCGCCGCT CGACACCCTCGCGGTCGGCCTGAAATTCCGCGCCCGCCTGATGCTGGCGCACGAGTTCGGGCAACGCCTTGCGCGTCTTG CCCAGGACTCGTGGCTGGAGCTTGCCGAATGGCCCGATGTAATCGCGCCCGTGCCGCTTGCCAGAAAACGCCTCGTCGAG CGCGGCTATAACCAGGCGTGGCAGATCGCGAGGCCATTGGCTCGCGCGCTGCATGTGCGCAGCGACGCAACCTTGCTGCA TCGGGTGATTCACACCGCGCCGCAGTCGCGGCTCGATCTCGACGCCCGCCGCCTGAACGTAGGCCGCGCTTTCAAGGTTG CAGGATCCGTGCAAGGCCTGCACGTCGGCATTGTCGACGATGTGATGACGACCGGCGCGACGCTCGAAGCGCTGGCACGC ACGCTCAAGGCCGCCGGTGCGCGCCAGGTCACCAACTTCGTCGCGCTGCGCACGCCGAAAAACTAG
Upstream 100 bases:
>100_bases CGGGAGTTGGGGACATGAGTGTCGTGCTGGCGTAGAGCCCGAAGTATACTCGTTCGTTTCCCTCCATTCAGCGTGGAAGG CCTCCGCGGACAGCCCAGTC
Downstream 100 bases:
>100_bases TCTCAACCTGAGCTCACCATGTTCAATGTCGTTCTCGTAGAACCGGAAATCCCGCCGAACACCGGCAACGTGATCCGTCT GTGCGCCAACACCGGCGCCC
Product: putative competence protein f-related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MPLRSISSFSGSRFARFARAVHSAWPRVAQVALPNLCALCGNLSHTTICAGCDAAYWNEERLRCTVCAVPLSVTQWAART QYRCADCAGEPPPFDATFALADYRAPLDTLAVGLKFRARLMLAHEFGQRLARLAQDSWLELAEWPDVIAPVPLARKRLVE RGYNQAWQIARPLARALHVRSDATLLHRVIHTAPQSRLDLDARRLNVGRAFKVAGSVQGLHVGIVDDVMTTGATLEALAR TLKAAGARQVTNFVALRTPKN
Sequences:
>Translated_261_residues MPLRSISSFSGSRFARFARAVHSAWPRVAQVALPNLCALCGNLSHTTICAGCDAAYWNEERLRCTVCAVPLSVTQWAART QYRCADCAGEPPPFDATFALADYRAPLDTLAVGLKFRARLMLAHEFGQRLARLAQDSWLELAEWPDVIAPVPLARKRLVE RGYNQAWQIARPLARALHVRSDATLLHRVIHTAPQSRLDLDARRLNVGRAFKVAGSVQGLHVGIVDDVMTTGATLEALAR TLKAAGARQVTNFVALRTPKN >Mature_260_residues PLRSISSFSGSRFARFARAVHSAWPRVAQVALPNLCALCGNLSHTTICAGCDAAYWNEERLRCTVCAVPLSVTQWAARTQ YRCADCAGEPPPFDATFALADYRAPLDTLAVGLKFRARLMLAHEFGQRLARLAQDSWLELAEWPDVIAPVPLARKRLVER GYNQAWQIARPLARALHVRSDATLLHRVIHTAPQSRLDLDARRLNVGRAFKVAGSVQGLHVGIVDDVMTTGATLEALART LKAAGARQVTNFVALRTPKN
Specific function: Could be involved in gluconate metabolism [H]
COG id: COG1040
COG function: function code R; Predicted amidophosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ComF/GntX family [H]
Homologues:
Organism=Escherichia coli, GI87082263, Length=235, Percent_Identity=34.468085106383, Blast_Score=107, Evalue=9e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005222 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 28688; Mature: 28557
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRSISSFSGSRFARFARAVHSAWPRVAQVALPNLCALCGNLSHTTICAGCDAAYWNEE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHCCCC RLRCTVCAVPLSVTQWAARTQYRCADCAGEPPPFDATFALADYRAPLDTLAVGLKFRARL CEEEEEEECCHHHHHHHHHHCCHHHHCCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHH MLAHEFGQRLARLAQDSWLELAEWPDVIAPVPLARKRLVERGYNQAWQIARPLARALHVR HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC SDATLLHRVIHTAPQSRLDLDARRLNVGRAFKVAGSVQGLHVGIVDDVMTTGATLEALAR CHHHHHHHHHHHCCHHHHCCHHHHHCCCHHEECCCCCCCEEEHHHHHHHHCCHHHHHHHH TLKAAGARQVTNFVALRTPKN HHHHCCHHHHHHHHEECCCCC >Mature Secondary Structure PLRSISSFSGSRFARFARAVHSAWPRVAQVALPNLCALCGNLSHTTICAGCDAAYWNEE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHCCCC RLRCTVCAVPLSVTQWAARTQYRCADCAGEPPPFDATFALADYRAPLDTLAVGLKFRARL CEEEEEEECCHHHHHHHHHHCCHHHHCCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHH MLAHEFGQRLARLAQDSWLELAEWPDVIAPVPLARKRLVERGYNQAWQIARPLARALHVR HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC SDATLLHRVIHTAPQSRLDLDARRLNVGRAFKVAGSVQGLHVGIVDDVMTTGATLEALAR CHHHHHHHHHHHCCHHHHCCHHHHHCCCHHEECCCCCCCEEEHHHHHHHHCCHHHHHHHH TLKAAGARQVTNFVALRTPKN HHHHCCHHHHHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]