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The map label for this gene is secB [H]

Identifier: 91781668

GI number: 91781668

Start: 319526

End: 319996

Strand: Direct

Name: secB [H]

Synonym: Bxe_A4178

Alternate gene names: 91781668

Gene position: 319526-319996 (Clockwise)

Preceding gene: 91781667

Following gene: 91781669

Centisome position: 6.53

GC content: 61.57

Gene sequence:

>471_bases
ATGTCCGACGAGAATAACCAGCCGTTCTTCAACATCCAGCGTATCTATCTGAAGGACATGTCGCTCGAGCAGCCGAATTC
GCCGGGCATCTTCCTCGAGCAGGAAATGCCGTCGGTCGAAGTCGAAGTCGACGTGAAGGCCGAGCGCCTCGCCGAGACGG
TGTTCGAAATCCTCGTCACGGGCACGGTCACGGCCAAGGTGTCGGACAAGGTTGCGTTCCTGATCGAAGCCAAGCAAGCC
GGCATTTTCGACATCCGCAATATTCCCGCCGAGCAGATCGACCCGCTGGTCGGCATTGCCTGCCCGACCATCCTGTTCCC
GTACCTGCGCTCGAACATCGCCGACGCGATCACCCGCGCCGGTTTCCCGCCGATCCACCTCGCCGAGATCAACTTCCAGG
CACTGTACGAGCAACGCCTCGCGCAGATGGGCGGCCAGGACGGCGCGGCGCAAAACGGCGTCACGCACTAA

Upstream 100 bases:

>100_bases
CGTCTCCGCCTCATCCGGGCGGGCGGCGTGCCGCAACGATCTGGCGGCCCATGCGTGCATGGGCCGCCGCTATGCATACC
TATCAGGGAATCACTTCATC

Downstream 100 bases:

>100_bases
GGTGTCGCGAGCAGTGCCGGCTATGAAGGTTGCCGTCCTCGGCGCCGGCGCATGGGGCACCGCGCTCGCCGGCCATCTGG
CCGTACGGCACGACACAGTG

Product: preprotein translocase subunit SecB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSDENNQPFFNIQRIYLKDMSLEQPNSPGIFLEQEMPSVEVEVDVKAERLAETVFEILVTGTVTAKVSDKVAFLIEAKQA
GIFDIRNIPAEQIDPLVGIACPTILFPYLRSNIADAITRAGFPPIHLAEINFQALYEQRLAQMGGQDGAAQNGVTH

Sequences:

>Translated_156_residues
MSDENNQPFFNIQRIYLKDMSLEQPNSPGIFLEQEMPSVEVEVDVKAERLAETVFEILVTGTVTAKVSDKVAFLIEAKQA
GIFDIRNIPAEQIDPLVGIACPTILFPYLRSNIADAITRAGFPPIHLAEINFQALYEQRLAQMGGQDGAAQNGVTH
>Mature_155_residues
SDENNQPFFNIQRIYLKDMSLEQPNSPGIFLEQEMPSVEVEVDVKAERLAETVFEILVTGTVTAKVSDKVAFLIEAKQAG
IFDIRNIPAEQIDPLVGIACPTILFPYLRSNIADAITRAGFPPIHLAEINFQALYEQRLAQMGGQDGAAQNGVTH

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family [H]

Homologues:

Organism=Escherichia coli, GI1790038, Length=147, Percent_Identity=42.1768707482993, Blast_Score=130, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003708 [H]

Pfam domain/function: PF02556 SecB [H]

EC number: NA

Molecular weight: Translated: 17232; Mature: 17101

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDENNQPFFNIQRIYLKDMSLEQPNSPGIFLEQEMPSVEVEVDVKAERLAETVFEILVT
CCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHH
GTVTAKVSDKVAFLIEAKQAGIFDIRNIPAEQIDPLVGIACPTILFPYLRSNIADAITRA
CCEEEECCCCEEEEEECCCCCEEECCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC
GFPPIHLAEINFQALYEQRLAQMGGQDGAAQNGVTH
CCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDENNQPFFNIQRIYLKDMSLEQPNSPGIFLEQEMPSVEVEVDVKAERLAETVFEILVT
CCCCCCCEEEEEEEEEECCCCCCCCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHH
GTVTAKVSDKVAFLIEAKQAGIFDIRNIPAEQIDPLVGIACPTILFPYLRSNIADAITRA
CCEEEECCCCEEEEEECCCCCEEECCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC
GFPPIHLAEINFQALYEQRLAQMGGQDGAAQNGVTH
CCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA