| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781538
Identifier: 91781538
GI number: 91781538
Start: 181239
End: 181883
Strand: Direct
Name: 91781538
Synonym: Bxe_A4307
Alternate gene names: NA
Gene position: 181239-181883 (Clockwise)
Preceding gene: 91781537
Following gene: 91781539
Centisome position: 3.7
GC content: 63.26
Gene sequence:
>645_bases ATGACTCACCACTCTTCACGCCCGAGTATCACTCGCCCGCGCAAGACGCCGAGCCAGGCGCGCGCCGAGGAAACCGTGGA ATCGATCGTCGAGGCGGCTGCTCAGGTGCTGGAAGCCGAGGGGCTCGAAGGATTCAATACGAACGCGATAGCCCGGCGCG CGGGTGTCAGCATCGGGTCGCTATATCAATACTTTCCTGGCAAGGATGCGCTGACGGTCGCGCTGATCCAGCGAGAAACC AGGCGGTTCTACCACGATGCAGCAGCCGCGCTGACTCAGCGGAGCGGCAAGGCCGCGCTCGAGTATCTGATCGGCGCATC GGTACGCCAGCAGCTACAACGACCTATGCTGGCGAAACTGCTCGATGTGCAGGAAAGCAGCCCCGCCTTGCGTGGCGAGG TCGAGAAAGTGGAGTTCGACGCGCTGGTCGTAGCGATCGTCAAGCGTGTGGCGCCGCGACTCGAGCATCCTGAAGTAGCC GCAGCCGATCTGCTGGCAATCGTCCAGGGCCTGACAGACGCAGCAGGCCAGCGCGGAGAGCGTGACCTCGAAAGCCTGGA ACATCGCGTGCGCGCGGCCGCTTTCGGCTATCTGTCGAGGATCGCGAAGCGCGATAAGCATTCGCCACGAGCGGGTGGAA TGTGA
Upstream 100 bases:
>100_bases CTTTTTTTCCGGCCCGCAGCGTTCCACGCCGCTCACACCGAAGCATAGCCATTCGCCAGATACTTCCACCCACGCAGCAA TCCGCAACGACGGAGCACAC
Downstream 100 bases:
>100_bases GCAATCATCGCGGCACGAGCGTGCCTCTCCGTCCGTCTCGCCCACTACACCAAGGACTCGCGGCGCACGATCGAGCGATT GCAATGCGAGTTGTTGAATG
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator TetR Family Protein; Transcription Regulator Protein; Regulatory Protein TetR; Transcriptional Regulator Protein TetR Family; TetR Family Transcriptional Regulatory Protein; Transcriptional Regulator Protein; HTH-Type Transcriptional Regulator BetI; Regulatory Protein; TetR Family Regulatory Protein; TetR Family Regulatory
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTHHSSRPSITRPRKTPSQARAEETVESIVEAAAQVLEAEGLEGFNTNAIARRAGVSIGSLYQYFPGKDALTVALIQRET RRFYHDAAAALTQRSGKAALEYLIGASVRQQLQRPMLAKLLDVQESSPALRGEVEKVEFDALVVAIVKRVAPRLEHPEVA AADLLAIVQGLTDAAGQRGERDLESLEHRVRAAAFGYLSRIAKRDKHSPRAGGM
Sequences:
>Translated_214_residues MTHHSSRPSITRPRKTPSQARAEETVESIVEAAAQVLEAEGLEGFNTNAIARRAGVSIGSLYQYFPGKDALTVALIQRET RRFYHDAAAALTQRSGKAALEYLIGASVRQQLQRPMLAKLLDVQESSPALRGEVEKVEFDALVVAIVKRVAPRLEHPEVA AADLLAIVQGLTDAAGQRGERDLESLEHRVRAAAFGYLSRIAKRDKHSPRAGGM >Mature_213_residues THHSSRPSITRPRKTPSQARAEETVESIVEAAAQVLEAEGLEGFNTNAIARRAGVSIGSLYQYFPGKDALTVALIQRETR RFYHDAAAALTQRSGKAALEYLIGASVRQQLQRPMLAKLLDVQESSPALRGEVEKVEFDALVVAIVKRVAPRLEHPEVAA ADLLAIVQGLTDAAGQRGERDLESLEHRVRAAAFGYLSRIAKRDKHSPRAGGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23330; Mature: 23199
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHHSSRPSITRPRKTPSQARAEETVESIVEAAAQVLEAEGLEGFNTNAIARRAGVSIGS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHH LYQYFPGKDALTVALIQRETRRFYHDAAAALTQRSGKAALEYLIGASVRQQLQRPMLAKL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDVQESSPALRGEVEKVEFDALVVAIVKRVAPRLEHPEVAAADLLAIVQGLTDAAGQRGE HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCH RDLESLEHRVRAAAFGYLSRIAKRDKHSPRAGGM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure THHSSRPSITRPRKTPSQARAEETVESIVEAAAQVLEAEGLEGFNTNAIARRAGVSIGS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHH LYQYFPGKDALTVALIQRETRRFYHDAAAALTQRSGKAALEYLIGASVRQQLQRPMLAKL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDVQESSPALRGEVEKVEFDALVVAIVKRVAPRLEHPEVAAADLLAIVQGLTDAAGQRGE HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCH RDLESLEHRVRAAAFGYLSRIAKRDKHSPRAGGM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA