| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91781488
Identifier: 91781488
GI number: 91781488
Start: 125679
End: 126419
Strand: Direct
Name: 91781488
Synonym: Bxe_A4358
Alternate gene names: NA
Gene position: 125679-126419 (Clockwise)
Preceding gene: 91781486
Following gene: 91781496
Centisome position: 2.57
GC content: 65.45
Gene sequence:
>741_bases TTGAACGCGCCTGACTCGATCGACATGAAACCCGCCGCCGGTCACGGCACGCAATACACGGCTCACACGCGGGGGCCCGG CCGTCATCTGATGGACGACGCCGAACAGGCGGCGCGGCGTCAGCGCTCGCGGCGCGCGAATTTCATCAAGTGGCTGCGCA AGGTGCACGGCTGGGTCGGCCTGTGGGGCGCTGTGCTGGGCTTGCTGTTCGGCGCGACCGGGTTTCTGCTGAACCACCGC GGCGGCCCGTTGAAGGTCTCGTCGGGCGAGCCGCAAGTCGAGCAGATGCAGATTCCCGTCCCGCAAGAACCGCTGCGCTC GCCGGTGGAGATGGCGAAGTGGCTCACAGCCGAGTTGAAGATCGACGGCAAGCCGGGCAGAACGAAGCGCGAACCGGCGC ATCCGGTGGCGTGGGGCGATCGCAGCACGATGCAGCCGGAATTCTGGCAGGTCGGCATCATGGGGCCGTCGCAAAGCGTG CAGGCCGAATACTGGGTGGGCAACGGCTTCGTCGCGGTGAAACGCACGCAGAACTCGTTTCTCTCGACCATGAACAACCT GCACAAAGGCGTGGGACTGAGCGTCGGCTGGGTGTTGCTGATCGATACGATCGCCGGCAGCATGATTCTGCTTTCACTGA CCGGCGTGCTGCTGTGGACCGAGTTGAACAGGCGCCGCGTGGTGGGCGTCGTGCTGGTGGGCGGGTCGGTGATCGCCGCC GTGGTTTGCGGCTTGATGTAA
Upstream 100 bases:
>100_bases GCACTCCCTTTTAGTCCTTTCCTCGAACACTGCCGGGCGAGCGTACGCGTTGTCGCCGCGTGACGGCGATGGATCAACCT GCTGCGCCTGGAGCCCGGAT
Downstream 100 bases:
>100_bases GCGAATCGTTGCGCCGCGCTGAGTTGCTCTGACTCCGCGGTGGGCTGCGGTGCGGCGGCTGAGAACAGCGCGCCGCGCGC AGGCATGATTTCCGTTAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Family Protein; PepSY-Associated TM Helix
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MNAPDSIDMKPAAGHGTQYTAHTRGPGRHLMDDAEQAARRQRSRRANFIKWLRKVHGWVGLWGAVLGLLFGATGFLLNHR GGPLKVSSGEPQVEQMQIPVPQEPLRSPVEMAKWLTAELKIDGKPGRTKREPAHPVAWGDRSTMQPEFWQVGIMGPSQSV QAEYWVGNGFVAVKRTQNSFLSTMNNLHKGVGLSVGWVLLIDTIAGSMILLSLTGVLLWTELNRRRVVGVVLVGGSVIAA VVCGLM
Sequences:
>Translated_246_residues MNAPDSIDMKPAAGHGTQYTAHTRGPGRHLMDDAEQAARRQRSRRANFIKWLRKVHGWVGLWGAVLGLLFGATGFLLNHR GGPLKVSSGEPQVEQMQIPVPQEPLRSPVEMAKWLTAELKIDGKPGRTKREPAHPVAWGDRSTMQPEFWQVGIMGPSQSV QAEYWVGNGFVAVKRTQNSFLSTMNNLHKGVGLSVGWVLLIDTIAGSMILLSLTGVLLWTELNRRRVVGVVLVGGSVIAA VVCGLM >Mature_246_residues MNAPDSIDMKPAAGHGTQYTAHTRGPGRHLMDDAEQAARRQRSRRANFIKWLRKVHGWVGLWGAVLGLLFGATGFLLNHR GGPLKVSSGEPQVEQMQIPVPQEPLRSPVEMAKWLTAELKIDGKPGRTKREPAHPVAWGDRSTMQPEFWQVGIMGPSQSV QAEYWVGNGFVAVKRTQNSFLSTMNNLHKGVGLSVGWVLLIDTIAGSMILLSLTGVLLWTELNRRRVVGVVLVGGSVIAA VVCGLM
Specific function: Unknown
COG id: COG3295
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26886; Mature: 26886
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPDSIDMKPAAGHGTQYTAHTRGPGRHLMDDAEQAARRQRSRRANFIKWLRKVHGWVG CCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWGAVLGLLFGATGFLLNHRGGPLKVSSGEPQVEQMQIPVPQEPLRSPVEMAKWLTAELK HHHHHHHHHHCCHHHEEECCCCCEEECCCCCCHHEEECCCCHHHHCCHHHHHHHHEEEEE IDGKPGRTKREPAHPVAWGDRSTMQPEFWQVGIMGPSQSVQAEYWVGNGFVAVKRTQNSF ECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCEEEEEECHHHH LSTMNNLHKGVGLSVGWVLLIDTIAGSMILLSLTGVLLWTELNRRRVVGVVLVGGSVIAA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHH VVCGLM HHHHCC >Mature Secondary Structure MNAPDSIDMKPAAGHGTQYTAHTRGPGRHLMDDAEQAARRQRSRRANFIKWLRKVHGWVG CCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWGAVLGLLFGATGFLLNHRGGPLKVSSGEPQVEQMQIPVPQEPLRSPVEMAKWLTAELK HHHHHHHHHHCCHHHEEECCCCCEEECCCCCCHHEEECCCCHHHHCCHHHHHHHHEEEEE IDGKPGRTKREPAHPVAWGDRSTMQPEFWQVGIMGPSQSVQAEYWVGNGFVAVKRTQNSF ECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCEEEEEECHHHH LSTMNNLHKGVGLSVGWVLLIDTIAGSMILLSLTGVLLWTELNRRRVVGVVLVGGSVIAA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHH VVCGLM HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA