| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91781487
Identifier: 91781487
GI number: 91781487
Start: 123449
End: 125350
Strand: Reverse
Name: 91781487
Synonym: Bxe_A4359
Alternate gene names: NA
Gene position: 125350-123449 (Counterclockwise)
Preceding gene: 91781489
Following gene: 91781484
Centisome position: 2.56
GC content: 66.09
Gene sequence:
>1902_bases ATGCGCCTTTCTTCCCTGGTTTGTCTTGCCTCCTTCGGCTGGCTTGCCGGCATCCACGGCGCGGGGGCGAGCGTCGCGGC CAGACTGGACGATCCCTATACCAACGAAGGCGAGACGCAGACCTTCACCGTCAACGCGGACGGCTCCTATTCGAAGCTCG ATTCGATGACACTGCTCGTGAACAACGAAGCGGGCGTCGCGCGGGTCGCTCAGCAATATGTCTGGTTCAACCGCAACATG GCGGACGTGCAGATCATCGAGGCCTACACGATCACCGCCGACGGCGTACGTCACGACGTGCAGCCCGATCAGATCCGCGA CGTCCAGGAAGCCCGCTCGTTCGACGCACCGATGTTTCAGGACATTCAGGAAAAGGTGATCGTGTTTCCCGCCGTGGAAC CGGGCGCGCGTGTGCATCTCACCTATCGCAAGACGCAGAAGCAGCCGATCGTGCCGGGCCAGTTCAGCGACTTCACGCCG CCCGATCTCGCACCCACGCACAACTTCCGCCTGATCTACGATCTGCCCGCCGGCAAGCCGCTTTATGCCGACGCGCGCGG CTTCACCGTCGTGCAGCCCGTGACGCGCGAAGGCCGCACGCGCTACGAATATCGCTACGACAAGGCGCATTTCAGCCGCC TGGAGCGCGGCTCGGTTGCGTACGTGTCGTACGGCGACCGGCTGATGGTCTCGACCTTCCCGGACTACGCCGCGTTCGCC GCAACCTACCGGGAATCCGCCGCGGACCCGAGCGCGCACGACGCCGCCGTCACGCGTCTCGCGCAACAGCTCACCGCGCA CGACCGCACGCCGCGCGACAAAGCCAAGACGCTGTACGACTGGGTACGCCGCAATGTGCGCTATGTAGCGATCAACGTCG GGCGCGGCGCGGTGGTGCCGCACGGCGCGAGCGCGGTCCTCGCGAACCGCTACGGCGACTGCAAGGATCACGTCGCGCTT TACGGCGCGTTGCTCGACGCGGCCGGCGTGCGCAACGAGCCGGCCCTGATCAGCAGCGGCACGATCTACACGCTGCCGAG CGTGCCGGGGTACGGCGTCATCAATCACATCATCACGTGGCTACCGGATTTGCAGCAGTACGCCGATTCGACCGCGTCGA ATGTCGAATTCGGTTTTCTGCCGCCCTCCGACATGAACCGGCCGACCGTGCTCGTCGGCGAGGGTGTGCTCTCGCGCACG CCCGCCACGGCGCTCCTGACGCGCAGCACCGACCTGTCGATCAAGGTCGAACCGGATGGCTCGGCGAGCTTCACGTACCG GCTGGAGGCGGCCGGCGCTTCCGCCGAACAGACGCGCGCCATGCTGCGCACGCAAACACCCGCACAGCGCGAGGAATCGA TTCAGGCCGAATTGCGCAGCGCCAACCTGCGCGGCACCGCCACGCTCACCACGAACGACCTCACCGTGGCCGACGGCCCG CTCACCATCACGATGAAAGGCAGGCTGGAAAGTCTCGTGGTGCCCGGCGCGGCGGCGTCGATTCCGGCGCTGACGAGTCT GGCCGGCGGCTTCGAGGCGGATACGCGCTACTGGCTGGGCGAGCGCCAGCGCACGCAGCCGTTCATCTGCCGCAACCAGG CGCTGCATGAACGCGCGCGCATCGAGTTGCCCGCCAATTTTCGCGTGCTCGACGTGCCGGAGGCGAAGCGGACCCAGGAC CGCTTTGTCGATTTCCAGTCGCAGTACACGTTCGACCCGCAAAGCAACGTGGTCACGATGACGCGCGACGGCGCCACGCA TTTCGATAGCGACGTCTGCACACCCGACGACTTCGCGCAGATGCGCCCCACGATCGAAGCGATCGGGCGCGACGTGCGTG CCGAAGTAATTGTCAAATCGACGCTGGCGGAGCCGTCGAGCGTTGCTTCGCAGGCGCCGTGA
Upstream 100 bases:
>100_bases TTGCTCAATCGCAACACGCTGCATCTGCTTGACATCGGCGCGGCGCGCCCTGACTCTAACTGGCGATCCCGCCAACGTTA AGTCCGGATACCAGCCTGCC
Downstream 100 bases:
>100_bases GCGCGGGCGAAAGCGCATGCCTTCGCCGGGCGCGCACTCAAACGGGCCAAAGCGGCCCTTCCTGCATCGCGCCGATCTGC TCGCGCAATTCGAGGATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 633; Mature: 633
Protein sequence:
>633_residues MRLSSLVCLASFGWLAGIHGAGASVAARLDDPYTNEGETQTFTVNADGSYSKLDSMTLLVNNEAGVARVAQQYVWFNRNM ADVQIIEAYTITADGVRHDVQPDQIRDVQEARSFDAPMFQDIQEKVIVFPAVEPGARVHLTYRKTQKQPIVPGQFSDFTP PDLAPTHNFRLIYDLPAGKPLYADARGFTVVQPVTREGRTRYEYRYDKAHFSRLERGSVAYVSYGDRLMVSTFPDYAAFA ATYRESAADPSAHDAAVTRLAQQLTAHDRTPRDKAKTLYDWVRRNVRYVAINVGRGAVVPHGASAVLANRYGDCKDHVAL YGALLDAAGVRNEPALISSGTIYTLPSVPGYGVINHIITWLPDLQQYADSTASNVEFGFLPPSDMNRPTVLVGEGVLSRT PATALLTRSTDLSIKVEPDGSASFTYRLEAAGASAEQTRAMLRTQTPAQREESIQAELRSANLRGTATLTTNDLTVADGP LTITMKGRLESLVVPGAAASIPALTSLAGGFEADTRYWLGERQRTQPFICRNQALHERARIELPANFRVLDVPEAKRTQD RFVDFQSQYTFDPQSNVVTMTRDGATHFDSDVCTPDDFAQMRPTIEAIGRDVRAEVIVKSTLAEPSSVASQAP
Sequences:
>Translated_633_residues MRLSSLVCLASFGWLAGIHGAGASVAARLDDPYTNEGETQTFTVNADGSYSKLDSMTLLVNNEAGVARVAQQYVWFNRNM ADVQIIEAYTITADGVRHDVQPDQIRDVQEARSFDAPMFQDIQEKVIVFPAVEPGARVHLTYRKTQKQPIVPGQFSDFTP PDLAPTHNFRLIYDLPAGKPLYADARGFTVVQPVTREGRTRYEYRYDKAHFSRLERGSVAYVSYGDRLMVSTFPDYAAFA ATYRESAADPSAHDAAVTRLAQQLTAHDRTPRDKAKTLYDWVRRNVRYVAINVGRGAVVPHGASAVLANRYGDCKDHVAL YGALLDAAGVRNEPALISSGTIYTLPSVPGYGVINHIITWLPDLQQYADSTASNVEFGFLPPSDMNRPTVLVGEGVLSRT PATALLTRSTDLSIKVEPDGSASFTYRLEAAGASAEQTRAMLRTQTPAQREESIQAELRSANLRGTATLTTNDLTVADGP LTITMKGRLESLVVPGAAASIPALTSLAGGFEADTRYWLGERQRTQPFICRNQALHERARIELPANFRVLDVPEAKRTQD RFVDFQSQYTFDPQSNVVTMTRDGATHFDSDVCTPDDFAQMRPTIEAIGRDVRAEVIVKSTLAEPSSVASQAP >Mature_633_residues MRLSSLVCLASFGWLAGIHGAGASVAARLDDPYTNEGETQTFTVNADGSYSKLDSMTLLVNNEAGVARVAQQYVWFNRNM ADVQIIEAYTITADGVRHDVQPDQIRDVQEARSFDAPMFQDIQEKVIVFPAVEPGARVHLTYRKTQKQPIVPGQFSDFTP PDLAPTHNFRLIYDLPAGKPLYADARGFTVVQPVTREGRTRYEYRYDKAHFSRLERGSVAYVSYGDRLMVSTFPDYAAFA ATYRESAADPSAHDAAVTRLAQQLTAHDRTPRDKAKTLYDWVRRNVRYVAINVGRGAVVPHGASAVLANRYGDCKDHVAL YGALLDAAGVRNEPALISSGTIYTLPSVPGYGVINHIITWLPDLQQYADSTASNVEFGFLPPSDMNRPTVLVGEGVLSRT PATALLTRSTDLSIKVEPDGSASFTYRLEAAGASAEQTRAMLRTQTPAQREESIQAELRSANLRGTATLTTNDLTVADGP LTITMKGRLESLVVPGAAASIPALTSLAGGFEADTRYWLGERQRTQPFICRNQALHERARIELPANFRVLDVPEAKRTQD RFVDFQSQYTFDPQSNVVTMTRDGATHFDSDVCTPDDFAQMRPTIEAIGRDVRAEVIVKSTLAEPSSVASQAP
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69494; Mature: 69494
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSSLVCLASFGWLAGIHGAGASVAARLDDPYTNEGETQTFTVNADGSYSKLDSMTLLV CCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCHHHCCEEEEE NNEAGVARVAQQYVWFNRNMADVQIIEAYTITADGVRHDVQPDQIRDVQEARSFDAPMFQ ECCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHH DIQEKVIVFPAVEPGARVHLTYRKTQKQPIVPGQFSDFTPPDLAPTHNFRLIYDLPAGKP HHCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCE LYADARGFTVVQPVTREGRTRYEYRYDKAHFSRLERGSVAYVSYGDRLMVSTFPDYAAFA EEECCCCCEEECCHHCCCCEEEEEEECHHHHHHHCCCCEEEEEECCEEEEECCCCHHHHH ATYRESAADPSAHDAAVTRLAQQLTAHDRTPRDKAKTLYDWVRRNVRYVAINVGRGAVVP HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCC HGASAVLANRYGDCKDHVALYGALLDAAGVRNEPALISSGTIYTLPSVPGYGVINHIITW CCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCEEEECCCCCCCHHHHHHHHH LPDLQQYADSTASNVEFGFLPPSDMNRPTVLVGEGVLSRTPATALLTRSTDLSIKVEPDG CHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCEEEEECCCC SASFTYRLEAAGASAEQTRAMLRTQTPAQREESIQAELRSANLRGTATLTTNDLTVADGP CCEEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEECCC LTITMKGRLESLVVPGAAASIPALTSLAGGFEADTRYWLGERQRTQPFICRNQALHERAR EEEEECCCCCEEECCCCCCCCHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHE IELPANFRVLDVPEAKRTQDRFVDFQSQYTFDPQSNVVTMTRDGATHFDSDVCTPDDFAQ EECCCCEEEEECCCCHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCHHHHH MRPTIEAIGRDVRAEVIVKSTLAEPSSVASQAP HCHHHHHHCCCHHHHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure MRLSSLVCLASFGWLAGIHGAGASVAARLDDPYTNEGETQTFTVNADGSYSKLDSMTLLV CCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCHHHCCEEEEE NNEAGVARVAQQYVWFNRNMADVQIIEAYTITADGVRHDVQPDQIRDVQEARSFDAPMFQ ECCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHH DIQEKVIVFPAVEPGARVHLTYRKTQKQPIVPGQFSDFTPPDLAPTHNFRLIYDLPAGKP HHCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCE LYADARGFTVVQPVTREGRTRYEYRYDKAHFSRLERGSVAYVSYGDRLMVSTFPDYAAFA EEECCCCCEEECCHHCCCCEEEEEEECHHHHHHHCCCCEEEEEECCEEEEECCCCHHHHH ATYRESAADPSAHDAAVTRLAQQLTAHDRTPRDKAKTLYDWVRRNVRYVAINVGRGAVVP HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCC HGASAVLANRYGDCKDHVALYGALLDAAGVRNEPALISSGTIYTLPSVPGYGVINHIITW CCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCEEEECCCCCCCHHHHHHHHH LPDLQQYADSTASNVEFGFLPPSDMNRPTVLVGEGVLSRTPATALLTRSTDLSIKVEPDG CHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCEEEEECCCC SASFTYRLEAAGASAEQTRAMLRTQTPAQREESIQAELRSANLRGTATLTTNDLTVADGP CCEEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEECCC LTITMKGRLESLVVPGAAASIPALTSLAGGFEADTRYWLGERQRTQPFICRNQALHERAR EEEEECCCCCEEECCCCCCCCHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHE IELPANFRVLDVPEAKRTQDRFVDFQSQYTFDPQSNVVTMTRDGATHFDSDVCTPDDFAQ EECCCCEEEEECCCCHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCHHHHH MRPTIEAIGRDVRAEVIVKSTLAEPSSVASQAP HCHHHHHHCCCHHHHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA