| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yghZ [H]
Identifier: 91781479
GI number: 91781479
Start: 112352
End: 113395
Strand: Direct
Name: yghZ [H]
Synonym: Bxe_A4367
Alternate gene names: 91781479
Gene position: 112352-113395 (Clockwise)
Preceding gene: 91781477
Following gene: 91781485
Centisome position: 2.29
GC content: 61.69
Gene sequence:
>1044_bases ATGGCTTACGAAGCAGCTTCAGAACGCTATTCGGATATGCAGTACCGCGTCTGCGGCAAGTCGGGACTCAAGCTGCCGGC GCTATCGCTCGGCTTGTGGCACAACTTCGGCGACACCACGCCGATCTCCACGCAGCGCGACATCCTGCGCACGGCTTTCG ACCTGGGTATCACGCACTTCGACCTCGCCAACAATTATGGGCCGCCGTACGGCAGCGCCGAAACCAACTTCGGCCGCCTC TTCAAGGACGACTTCAAGCCGTATCGCGACGAACTGCTGATTTCGTCGAAGGCCGGTTGGGACATGTGGCCGGGTCCGTA TGGACAAGGCGGCGGCTCGCGCAAATACGTGCTCGCAAGTCTCGATAAGAGCCTGCAACGCATGGGCCTCGATTACGTCG ATATTTTCTATTCGCATCGTTTCGATGCCGAGACGCCGCTCGAAGAAACCGCGGGTGCGTTGGCGAGCGCCGTGCAGCAA GGCAAGGCGCTGTACATCGGCATTTCGTCGTACTCGGCAAGCAAGACGCTCGAAATGGCGAAGCTGCTCGCCGAATACAA GGTGCCGCTGCTGATTCATCAGCCTTCGTACAACATGCTCAATCGCTGGATCGAGCATGAGTTGCTGGGCGCACTGGAGA AAGCCGGCGCGGGCGCCATCGCGTTCACGCCGCTGGCTCAGGGGCTGCTCACGAGCAAGTATCTGAACGGCGTGCCGGAA GACGCGCGCGTCAACAAGCCGGGCGGCGGTTCGTTGAAGCAGGAGCATCTGAGCCCGCAGAATATCGAGCACGTGCGCAA GCTCAACGACATCGCGCAACGTCGCGGTCAGAGCCTCGCACAAATGGCGCTCGCGTGGGCGCTGCGCGATCCGCGCGTGA CTTCCGTGCTGATCGGCGCGAGCCGCGCGGAGCAGGTGCGTGAAAACGTCGGCGCGCTGAAGAACCTTGCGTTCTCGAAG GACGAGCTGGCCGAGATCGACCGCTACGCGACCGAAGGCGGCATCAACCTGTGGGAAAAGCCGTCGACGGATCAGGCGAT CTGA
Upstream 100 bases:
>100_bases CGCATCCCCAGCTACAAAAAATAAAGCGGCACGCCTCCCGCAGCATGCAATTGCCCATGCCCGCACCGGTCGGGCGCCTT CACCATCAAGGACACTAGCA
Downstream 100 bases:
>100_bases TTCCCGCGTCGTCTTTCACGCCGTAGAAGCAGCAAAGCCGCCCACGGGCGGCTTTTTTCGTCTAGACGAGCGCCGGCAAA CCCTCGACCAGCACTACCGC
Product: putative aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MAYEAASERYSDMQYRVCGKSGLKLPALSLGLWHNFGDTTPISTQRDILRTAFDLGITHFDLANNYGPPYGSAETNFGRL FKDDFKPYRDELLISSKAGWDMWPGPYGQGGGSRKYVLASLDKSLQRMGLDYVDIFYSHRFDAETPLEETAGALASAVQQ GKALYIGISSYSASKTLEMAKLLAEYKVPLLIHQPSYNMLNRWIEHELLGALEKAGAGAIAFTPLAQGLLTSKYLNGVPE DARVNKPGGGSLKQEHLSPQNIEHVRKLNDIAQRRGQSLAQMALAWALRDPRVTSVLIGASRAEQVRENVGALKNLAFSK DELAEIDRYATEGGINLWEKPSTDQAI
Sequences:
>Translated_347_residues MAYEAASERYSDMQYRVCGKSGLKLPALSLGLWHNFGDTTPISTQRDILRTAFDLGITHFDLANNYGPPYGSAETNFGRL FKDDFKPYRDELLISSKAGWDMWPGPYGQGGGSRKYVLASLDKSLQRMGLDYVDIFYSHRFDAETPLEETAGALASAVQQ GKALYIGISSYSASKTLEMAKLLAEYKVPLLIHQPSYNMLNRWIEHELLGALEKAGAGAIAFTPLAQGLLTSKYLNGVPE DARVNKPGGGSLKQEHLSPQNIEHVRKLNDIAQRRGQSLAQMALAWALRDPRVTSVLIGASRAEQVRENVGALKNLAFSK DELAEIDRYATEGGINLWEKPSTDQAI >Mature_346_residues AYEAASERYSDMQYRVCGKSGLKLPALSLGLWHNFGDTTPISTQRDILRTAFDLGITHFDLANNYGPPYGSAETNFGRLF KDDFKPYRDELLISSKAGWDMWPGPYGQGGGSRKYVLASLDKSLQRMGLDYVDIFYSHRFDAETPLEETAGALASAVQQG KALYIGISSYSASKTLEMAKLLAEYKVPLLIHQPSYNMLNRWIEHELLGALEKAGAGAIAFTPLAQGLLTSKYLNGVPED ARVNKPGGGSLKQEHLSPQNIEHVRKLNDIAQRRGQSLAQMALAWALRDPRVTSVLIGASRAEQVRENVGALKNLAFSKD ELAEIDRYATEGGINLWEKPSTDQAI
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27436964, Length=333, Percent_Identity=34.2342342342342, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI27436969, Length=321, Percent_Identity=36.1370716510903, Blast_Score=184, Evalue=7e-47, Organism=Homo sapiens, GI4504825, Length=319, Percent_Identity=36.0501567398119, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI27436962, Length=323, Percent_Identity=35.2941176470588, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI27436966, Length=323, Percent_Identity=34.984520123839, Blast_Score=181, Evalue=7e-46, Organism=Homo sapiens, GI27436971, Length=336, Percent_Identity=34.5238095238095, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI41152114, Length=213, Percent_Identity=30.9859154929577, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI41327764, Length=217, Percent_Identity=30.4147465437788, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI223718702, Length=312, Percent_Identity=27.8846153846154, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1789375, Length=345, Percent_Identity=66.3768115942029, Blast_Score=474, Evalue=1e-135, Organism=Escherichia coli, GI87081735, Length=325, Percent_Identity=34.1538461538462, Blast_Score=154, Evalue=9e-39, Organism=Escherichia coli, GI1789199, Length=346, Percent_Identity=30.3468208092486, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1788070, Length=280, Percent_Identity=30.3571428571429, Blast_Score=101, Evalue=7e-23, Organism=Escherichia coli, GI1788081, Length=317, Percent_Identity=26.1829652996845, Blast_Score=81, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6325169, Length=334, Percent_Identity=26.3473053892216, Blast_Score=97, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6319958, Length=280, Percent_Identity=26.4285714285714, Blast_Score=79, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6323998, Length=318, Percent_Identity=25.1572327044025, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6322615, Length=238, Percent_Identity=26.890756302521, Blast_Score=76, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6319951, Length=278, Percent_Identity=25.1798561151079, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24640980, Length=341, Percent_Identity=27.2727272727273, Blast_Score=111, Evalue=6e-25, Organism=Drosophila melanogaster, GI45549126, Length=341, Percent_Identity=27.2727272727273, Blast_Score=111, Evalue=9e-25, Organism=Drosophila melanogaster, GI24646159, Length=318, Percent_Identity=24.5283018867925, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24646155, Length=338, Percent_Identity=26.9230769230769, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 38291; Mature: 38160
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYEAASERYSDMQYRVCGKSGLKLPALSLGLWHNFGDTTPISTQRDILRTAFDLGITHF CCCCCHHHHHHCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHE DLANNYGPPYGSAETNFGRLFKDDFKPYRDELLISSKAGWDMWPGPYGQGGGSRKYVLAS EHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHEEEECCCCCCCCCCCCCCCCCCCHHHHHH LDKSLQRMGLDYVDIFYSHRFDAETPLEETAGALASAVQQGKALYIGISSYSASKTLEMA HHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH KLLAEYKVPLLIHQPSYNMLNRWIEHELLGALEKAGAGAIAFTPLAQGLLTSKYLNGVPE HHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCC DARVNKPGGGSLKQEHLSPQNIEHVRKLNDIAQRRGQSLAQMALAWALRDPRVTSVLIGA CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC SRAEQVRENVGALKNLAFSKDELAEIDRYATEGGINLWEKPSTDQAI HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure AYEAASERYSDMQYRVCGKSGLKLPALSLGLWHNFGDTTPISTQRDILRTAFDLGITHF CCCCHHHHHHCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHE DLANNYGPPYGSAETNFGRLFKDDFKPYRDELLISSKAGWDMWPGPYGQGGGSRKYVLAS EHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHEEEECCCCCCCCCCCCCCCCCCCHHHHHH LDKSLQRMGLDYVDIFYSHRFDAETPLEETAGALASAVQQGKALYIGISSYSASKTLEMA HHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH KLLAEYKVPLLIHQPSYNMLNRWIEHELLGALEKAGAGAIAFTPLAQGLLTSKYLNGVPE HHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCC DARVNKPGGGSLKQEHLSPQNIEHVRKLNDIAQRRGQSLAQMALAWALRDPRVTSVLIGA CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC SRAEQVRENVGALKNLAFSKDELAEIDRYATEGGINLWEKPSTDQAI HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]