| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91781460
Identifier: 91781460
GI number: 91781460
Start: 92847
End: 93650
Strand: Reverse
Name: 91781460
Synonym: Bxe_A4386
Alternate gene names: NA
Gene position: 93650-92847 (Counterclockwise)
Preceding gene: 91781461
Following gene: 161621319
Centisome position: 1.91
GC content: 64.8
Gene sequence:
>804_bases ATGCGCACTCCTACTTCCCGACGCCATCGTCCGCATATCGCAGGTGGCCGTCCGGTCTGGCTGTTCGACCTCGACAACAC GCTGCACCACGCATCGCACGCGATCTTTCCGGCAATCAATCACGGCATGACGCAGTACATCATCGACGCCTTGCAAGTGG ACCTCGAAGAAGCGAACCGTCTGCGCACCGGCTACACGCAGCGCTACGGCGCGGCGCTGCTCGGCCTCACGCGCCACCAT CCGCTCGACGCGAACGATTTCCTGAAGGTCGTGCACACGTTCCCCGACCTCGGCTCGATGATCCGCCACGAGCGCGGCGT GGCGCGCCTCGTGGCTGCTTTGCCGGGCCGCAAGATCGTGCTGACCAATGCGCCCGAAGCCTATGCGCGCGCGGTGCTCG CCGAACTGCGCATCGAGCGTCTGTTCGAGCAGGTGATCGCCATCGAACACATGCGCGACCGCCGCCTCTGGCGCGCCAAA CCCGACCATGCGATGCTGCGCAAAGCCATGCGCGACGCTCATGTTTCGCTCAAGGACGTGATCCTCGTCGAAGACACGCG CTCGCATCTGAAGAACTACCGGCGCCTCGGCATCCGCACGGTGTGGATCACCGGCCACCTGCCGCGCAAGCCGCACGCGG ACGGCGTGCCGACGCGCCTGCCGGGCACCGGCCGGCCGCACTATGTCGACCGGACCATTCGTTCGTTAAAATCGCTACGA CTGAGCACCCGCTCGGTTCGATTGAAGAGACAGCAGACGGGACGACAGCCATGCAGCCGATCGACAAGCCTGACCAAGTC TTAG
Upstream 100 bases:
>100_bases GCGCCGCTCCGCTCTCCCTTCTTTTTTCGCCGCCCGCACCGTGAACCGCTCGCGTTCGCCGCGTGAGGCGACGGTTCGCG CCTGAACGGCGTACTCCATC
Downstream 100 bases:
>100_bases CCGAACACGAACCGACCACCACGCTCGCCGCCCCGCGCGCGCAACGCCTGAAACCGGGCGAGCGTCGCGTGCACATCCTC CAGACGCTCGCCGCGATGCT
Product: HAD family hydrolase
Products: NA
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; HAD Family Pyrimidine 5-Nucleotidase; HAD Superfamily Hydrolase; HAD Family Hydrolase; Phosphatase; Hydrolase Protein; HAD Superfamily Protein; Haloacid Dehalogenase Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Phosphoglycolate Phosphatase; Hydrolase Ripening-Related Protein-Like; Hydrolase Of HAD Superfamily
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MRTPTSRRHRPHIAGGRPVWLFDLDNTLHHASHAIFPAINHGMTQYIIDALQVDLEEANRLRTGYTQRYGAALLGLTRHH PLDANDFLKVVHTFPDLGSMIRHERGVARLVAALPGRKIVLTNAPEAYARAVLAELRIERLFEQVIAIEHMRDRRLWRAK PDHAMLRKAMRDAHVSLKDVILVEDTRSHLKNYRRLGIRTVWITGHLPRKPHADGVPTRLPGTGRPHYVDRTIRSLKSLR LSTRSVRLKRQQTGRQPCSRSTSLTKS
Sequences:
>Translated_267_residues MRTPTSRRHRPHIAGGRPVWLFDLDNTLHHASHAIFPAINHGMTQYIIDALQVDLEEANRLRTGYTQRYGAALLGLTRHH PLDANDFLKVVHTFPDLGSMIRHERGVARLVAALPGRKIVLTNAPEAYARAVLAELRIERLFEQVIAIEHMRDRRLWRAK PDHAMLRKAMRDAHVSLKDVILVEDTRSHLKNYRRLGIRTVWITGHLPRKPHADGVPTRLPGTGRPHYVDRTIRSLKSLR LSTRSVRLKRQQTGRQPCSRSTSLTKS >Mature_267_residues MRTPTSRRHRPHIAGGRPVWLFDLDNTLHHASHAIFPAINHGMTQYIIDALQVDLEEANRLRTGYTQRYGAALLGLTRHH PLDANDFLKVVHTFPDLGSMIRHERGVARLVAALPGRKIVLTNAPEAYARAVLAELRIERLFEQVIAIEHMRDRRLWRAK PDHAMLRKAMRDAHVSLKDVILVEDTRSHLKNYRRLGIRTVWITGHLPRKPHADGVPTRLPGTGRPHYVDRTIRSLKSLR LSTRSVRLKRQQTGRQPCSRSTSLTKS
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30608; Mature: 30608
Theoretical pI: Translated: 11.86; Mature: 11.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTPTSRRHRPHIAGGRPVWLFDLDNTLHHASHAIFPAINHGMTQYIIDALQVDLEEANR CCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LRTGYTQRYGAALLGLTRHHPLDANDFLKVVHTFPDLGSMIRHERGVARLVAALPGRKIV HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LTNAPEAYARAVLAELRIERLFEQVIAIEHMRDRRLWRAKPDHAMLRKAMRDAHVSLKDV EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHE ILVEDTRSHLKNYRRLGIRTVWITGHLPRKPHADGVPTRLPGTGRPHYVDRTIRSLKSLR EEEHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LSTRSVRLKRQQTGRQPCSRSTSLTKS HHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MRTPTSRRHRPHIAGGRPVWLFDLDNTLHHASHAIFPAINHGMTQYIIDALQVDLEEANR CCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LRTGYTQRYGAALLGLTRHHPLDANDFLKVVHTFPDLGSMIRHERGVARLVAALPGRKIV HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LTNAPEAYARAVLAELRIERLFEQVIAIEHMRDRRLWRAKPDHAMLRKAMRDAHVSLKDV EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHE ILVEDTRSHLKNYRRLGIRTVWITGHLPRKPHADGVPTRLPGTGRPHYVDRTIRSLKSLR EEEHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LSTRSVRLKRQQTGRQPCSRSTSLTKS HHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA