| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91781452
Identifier: 91781452
GI number: 91781452
Start: 85690
End: 86529
Strand: Direct
Name: 91781452
Synonym: Bxe_A4394
Alternate gene names: NA
Gene position: 85690-86529 (Clockwise)
Preceding gene: 91781451
Following gene: 91781453
Centisome position: 1.75
GC content: 60.0
Gene sequence:
>840_bases ATGGCCAGGCAACCCGAACTCGACGACTTCCGCGTGCCGTATTTCGGCGACGGCAAGAAGAAAAACAAATTCTCGCTCGA CGGTTTCGATCCGGCTGCAAAACCATTTTCGGCCGGTTCGAAAGACGCCGACAAAACCCGGTTATCGGAAATCGGCGCGA AGCTCGACATCCAGCAGGAGCGTCTGCATGCGCAACAGCAGCGCCGTGTCCTGCTGGTGCTGCAGGGCATGGACACGAGC GGCAAGGACGGCACGATCCGCGCGGTGTTTCACGACGTCGATCCGCTCGGCTTGCGCATCGTGCCGTTCAAGGCGCCGAC GCCCGTCGAAATGGCGCACGATTTTCTCTGGCGCGTGCATTCGCAAGCGCCTGCCGCGGGCGAACTGACGGTTTTCAACC GCAGTCACTACGAAGATCTGCTGGTGCCCACCGTGCTCGGCAATCTGGACGCGCAAGCCTTCGAGCAGCGCTGCCACCAC ATCCGCCAGTTCGAAGCGTTGCTGGCCTATAGCGGTACGACCATCATCAAGTGCATGCTGCACATTTCCAAAGACGAGCA GCGTGTGCGTCTGCAGGCGCGTATCGACGATTCGACCAAGCATTGGAAATTCGACGTCGCCGATCTCGACGCGCGCAAGC AGTGGGACAGGTATCAGGTGGCGTATGGTGAGGCGCTGGCCGCGACATCGACCGAATACGCGCCGTGGTACGTGATTCCC GCCAACTCGAAGACGCACCGTAATGTGATGGTGGCGGAGTTGCTGCTGCGCACGTTCGAAGCGCTGAAGCTCGAATATCC ACCGGCCAAAGAATCGCTGAAGGGCATCAAGATCGTCTGA
Upstream 100 bases:
>100_bases TTCGCGCTTTGGCCACCGCGGGCTGTTGCCGGAAACGAAAGTGGGGCAGCGGCCCGTTTCGTTTGCGGGTCCGTTTAAAC GCAGATCACGGAGTGTGTGG
Downstream 100 bases:
>100_bases CCGCTGCCCTTTGCTTCAGAAACGAATCGACCATACAAGGAACGACATGTTGCGTGTGATTACCGCCAACCTGAACGGCA TCCGCTCAGCGGCGAAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: URF2 [H]
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MARQPELDDFRVPYFGDGKKKNKFSLDGFDPAAKPFSAGSKDADKTRLSEIGAKLDIQQERLHAQQQRRVLLVLQGMDTS GKDGTIRAVFHDVDPLGLRIVPFKAPTPVEMAHDFLWRVHSQAPAAGELTVFNRSHYEDLLVPTVLGNLDAQAFEQRCHH IRQFEALLAYSGTTIIKCMLHISKDEQRVRLQARIDDSTKHWKFDVADLDARKQWDRYQVAYGEALAATSTEYAPWYVIP ANSKTHRNVMVAELLLRTFEALKLEYPPAKESLKGIKIV
Sequences:
>Translated_279_residues MARQPELDDFRVPYFGDGKKKNKFSLDGFDPAAKPFSAGSKDADKTRLSEIGAKLDIQQERLHAQQQRRVLLVLQGMDTS GKDGTIRAVFHDVDPLGLRIVPFKAPTPVEMAHDFLWRVHSQAPAAGELTVFNRSHYEDLLVPTVLGNLDAQAFEQRCHH IRQFEALLAYSGTTIIKCMLHISKDEQRVRLQARIDDSTKHWKFDVADLDARKQWDRYQVAYGEALAATSTEYAPWYVIP ANSKTHRNVMVAELLLRTFEALKLEYPPAKESLKGIKIV >Mature_278_residues ARQPELDDFRVPYFGDGKKKNKFSLDGFDPAAKPFSAGSKDADKTRLSEIGAKLDIQQERLHAQQQRRVLLVLQGMDTSG KDGTIRAVFHDVDPLGLRIVPFKAPTPVEMAHDFLWRVHSQAPAAGELTVFNRSHYEDLLVPTVLGNLDAQAFEQRCHHI RQFEALLAYSGTTIIKCMLHISKDEQRVRLQARIDDSTKHWKFDVADLDARKQWDRYQVAYGEALAATSTEYAPWYVIPA NSKTHRNVMVAELLLRTFEALKLEYPPAKESLKGIKIV
Specific function: Unknown
COG id: COG2326
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011993 - InterPro: IPR022488 [H]
Pfam domain/function: PF03976 PPK2 [H]
EC number: NA
Molecular weight: Translated: 31685; Mature: 31553
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARQPELDDFRVPYFGDGKKKNKFSLDGFDPAAKPFSAGSKDADKTRLSEIGAKLDIQQE CCCCCCCCCEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHH RLHAQQQRRVLLVLQGMDTSGKDGTIRAVFHDVDPLGLRIVPFKAPTPVEMAHDFLWRVH HHHHHHHCEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHH SQAPAAGELTVFNRSHYEDLLVPTVLGNLDAQAFEQRCHHIRQFEALLAYSGTTIIKCML CCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH HISKDEQRVRLQARIDDSTKHWKFDVADLDARKQWDRYQVAYGEALAATSTEYAPWYVIP HCCCCCCEEEEEEEECCCCCEEEEEHHCCCHHHHCCHHHHHHCCHHHCCCCCCCCEEEEE ANSKTHRNVMVAELLLRTFEALKLEYPPAKESLKGIKIV CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCC >Mature Secondary Structure ARQPELDDFRVPYFGDGKKKNKFSLDGFDPAAKPFSAGSKDADKTRLSEIGAKLDIQQE CCCCCCCCEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHH RLHAQQQRRVLLVLQGMDTSGKDGTIRAVFHDVDPLGLRIVPFKAPTPVEMAHDFLWRVH HHHHHHHCEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHH SQAPAAGELTVFNRSHYEDLLVPTVLGNLDAQAFEQRCHHIRQFEALLAYSGTTIIKCML CCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH HISKDEQRVRLQARIDDSTKHWKFDVADLDARKQWDRYQVAYGEALAATSTEYAPWYVIP HCCCCCCEEEEEEEECCCCCEEEEEHHCCCHHHHCCHHHHHHCCHHHCCCCCCCCEEEEE ANSKTHRNVMVAELLLRTFEALKLEYPPAKESLKGIKIV CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8199775 [H]