| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is eutR [H]
Identifier: 91781407
GI number: 91781407
Start: 28717
End: 29775
Strand: Direct
Name: eutR [H]
Synonym: Bxe_A4440
Alternate gene names: 91781407
Gene position: 28717-29775 (Clockwise)
Preceding gene: 91781404
Following gene: 91781409
Centisome position: 0.59
GC content: 65.91
Gene sequence:
>1059_bases ATGACGACTGACACCTTCGGCGGCGACCTGCCGGCTTCGACGCTCGTGCCGCAGCCGAGCTTCTGCGTGCAGACCCGCGT CGCCCATGACGCCGACGAGCAGGCGCGCAATCTTCATGGCTGGAGCCAGACCTACGACCAGTTGACGGCCGGGTGCTTTG TCGGCGGACTGACGGAATTGTGTCTCGACCACATGCAACTGTTCGTCGAAACGACCAGCCACACGCTGCGGCAAACCTGC GAAGTGCAGAAGGATGCCTACTGGTTCGGCATTCCGGCTTGCGCCGCCGGTTCGGGGCGTATCGACGCGCAGGTGATCGC TGGCGACGCGCTCGCGTTTCGTCCGGGCGGGATCGAATTCGAACTGCTGACCTCGGCGGGTTACGAGATTTTCGGCGTGG TGGTCAAAGGGGAAGTGCTGCGCCGCTACGCGGCGCAAGTGGAGCGCGTCGGTCTGGCCGACCCTGTGCCGAACACGCAG GTCGTGCCGATCGGCATGGCGCGCAAGGCGCAGTTGTGCGCCACGCTGCGCCAGTTGCTCGACGATGGCGCGGCGCGCGG CACGCCGCTATCTTCGGTTGCTCGCAACAATCTGCAGGCCGCCGTGCTGGCTTCGCTGTTCGACGTCGGCGCGTTGCCTG CCTCGGAGCCGGTTGCGATGCCGGCACGTCCGCGCCGTCAGTCGATCGTATCGGAAGCGCGCGACTATGTGCTGCTCAAT CGCGACCGGGCGGTGAGCGTGCCCGAGTTGTGCGAGCAACTGCATGTGAGCCGGCGCACGCTGCAATACTGCTTTCAGGA CGTGCTCGGCATGGCGCCCGCCACGTATCTGCGCGCGATTCGCCTCAATGGCGCGCGGCGCGATCTGTCGAATGCATCGC GCGAATCACGCTCGGTGCAGGACGTCGCGGCGGCGTGGGGTTTCTGGCACTTGAGCCAGTTCGCGACCGATTACCGGAAG CTCTTCGGCATGCGGCCTTCGGAGACGTTGAAGGCGGCGACCGGCACACGCGTTGAAAGGGCTGGCGCGTTCAACGCGGT TGCTTTGGCGCACCACTGA
Upstream 100 bases:
>100_bases CGTGTGCCGGTACGGTTCGGGTGCGCAAGGTGTCGGGGGCGTTCGGCATGGGAATTGCCTTTCCCCTTTCACCTTCATAT CCCGCTTGCGCAGATCCGGT
Downstream 100 bases:
>100_bases TCTGACCGGCTGCAACGGCGCCGCACCGCGTCGCGCGCCAAGGCGCAAGCTTCGCTACACCGTCACTTGCGCAACAGCCG CAGTCCGTTCGCGACCACCA
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: Ethanolamine operon regulatory protein [H]
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MTTDTFGGDLPASTLVPQPSFCVQTRVAHDADEQARNLHGWSQTYDQLTAGCFVGGLTELCLDHMQLFVETTSHTLRQTC EVQKDAYWFGIPACAAGSGRIDAQVIAGDALAFRPGGIEFELLTSAGYEIFGVVVKGEVLRRYAAQVERVGLADPVPNTQ VVPIGMARKAQLCATLRQLLDDGAARGTPLSSVARNNLQAAVLASLFDVGALPASEPVAMPARPRRQSIVSEARDYVLLN RDRAVSVPELCEQLHVSRRTLQYCFQDVLGMAPATYLRAIRLNGARRDLSNASRESRSVQDVAAAWGFWHLSQFATDYRK LFGMRPSETLKAATGTRVERAGAFNAVALAHH
Sequences:
>Translated_352_residues MTTDTFGGDLPASTLVPQPSFCVQTRVAHDADEQARNLHGWSQTYDQLTAGCFVGGLTELCLDHMQLFVETTSHTLRQTC EVQKDAYWFGIPACAAGSGRIDAQVIAGDALAFRPGGIEFELLTSAGYEIFGVVVKGEVLRRYAAQVERVGLADPVPNTQ VVPIGMARKAQLCATLRQLLDDGAARGTPLSSVARNNLQAAVLASLFDVGALPASEPVAMPARPRRQSIVSEARDYVLLN RDRAVSVPELCEQLHVSRRTLQYCFQDVLGMAPATYLRAIRLNGARRDLSNASRESRSVQDVAAAWGFWHLSQFATDYRK LFGMRPSETLKAATGTRVERAGAFNAVALAHH >Mature_351_residues TTDTFGGDLPASTLVPQPSFCVQTRVAHDADEQARNLHGWSQTYDQLTAGCFVGGLTELCLDHMQLFVETTSHTLRQTCE VQKDAYWFGIPACAAGSGRIDAQVIAGDALAFRPGGIEFELLTSAGYEIFGVVVKGEVLRRYAAQVERVGLADPVPNTQV VPIGMARKAQLCATLRQLLDDGAARGTPLSSVARNNLQAAVLASLFDVGALPASEPVAMPARPRRQSIVSEARDYVLLNR DRAVSVPELCEQLHVSRRTLQYCFQDVLGMAPATYLRAIRLNGARRDLSNASRESRSVQDVAAAWGFWHLSQFATDYRKL FGMRPSETLKAATGTRVERAGAFNAVALAHH
Specific function: Activates the transcription of the eut operon. Also positively regulates its own transcription. Probably binds ethanolamine and vitamin B12 as effectors [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788778, Length=314, Percent_Identity=39.4904458598726, Blast_Score=212, Evalue=3e-56,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 [H]
Pfam domain/function: PF00165 HTH_AraC [H]
EC number: NA
Molecular weight: Translated: 38261; Mature: 38130
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDTFGGDLPASTLVPQPSFCVQTRVAHDADEQARNLHGWSQTYDQLTAGCFVGGLTEL CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH CLDHMQLFVETTSHTLRQTCEVQKDAYWFGIPACAAGSGRIDAQVIAGDALAFRPGGIEF HHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHCCCCCCCCEEEEECCEEEECCCCCEE ELLTSAGYEIFGVVVKGEVLRRYAAQVERVGLADPVPNTQVVPIGMARKAQLCATLRQLL EEECCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHH DDGAARGTPLSSVARNNLQAAVLASLFDVGALPASEPVAMPARPRRQSIVSEARDYVLLN HCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEC RDRAVSVPELCEQLHVSRRTLQYCFQDVLGMAPATYLRAIRLNGARRDLSNASRESRSVQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH DVAAAWGFWHLSQFATDYRKLFGMRPSETLKAATGTRVERAGAFNAVALAHH HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCCCCEEEECCC >Mature Secondary Structure TTDTFGGDLPASTLVPQPSFCVQTRVAHDADEQARNLHGWSQTYDQLTAGCFVGGLTEL CCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH CLDHMQLFVETTSHTLRQTCEVQKDAYWFGIPACAAGSGRIDAQVIAGDALAFRPGGIEF HHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHCCCCCCCCEEEEECCEEEECCCCCEE ELLTSAGYEIFGVVVKGEVLRRYAAQVERVGLADPVPNTQVVPIGMARKAQLCATLRQLL EEECCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHH DDGAARGTPLSSVARNNLQAAVLASLFDVGALPASEPVAMPARPRRQSIVSEARDYVLLN HCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEC RDRAVSVPELCEQLHVSRRTLQYCFQDVLGMAPATYLRAIRLNGARRDLSNASRESRSVQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH DVAAAWGFWHLSQFATDYRKLFGMRPSETLKAATGTRVERAGAFNAVALAHH HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8300522; 9205837; 9278503 [H]