| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is oxlT [H]
Identifier: 91781396
GI number: 91781396
Start: 16649
End: 17965
Strand: Reverse
Name: oxlT [H]
Synonym: Bxe_A4451
Alternate gene names: 91781396
Gene position: 17965-16649 (Counterclockwise)
Preceding gene: 91781397
Following gene: 91781395
Centisome position: 0.37
GC content: 61.5
Gene sequence:
>1317_bases GTGGCTACCCGAGAGCATCGCCCCACCAACCGCTGGCTCCAGTTGATTGCCGGCATCGTCGCCATGATCATGGTGGCCAA CTATCAGTACGCGTTCACGCTATTCACGCCAGGCATCAAGGAACACTTTGTCGGCACGCCGTATTCGTCGATCGCGCTGA TCTTCACCATTTTCGTTATTTTCGAAACCTGGCCGGTGCCGGTGGCCGGCGTGCTGATCGACAAGTTCGGCGTGAAGCTG CTGATGTTCATCGGCACCGGTCTCGTGTTTACCGGCTGGCTGCTGGGCGGTGCGTTCGCTGGGAGCGTCAAGGACCTCTA TCTCTACTACGGCGTGATTACCGGACTCGGCGCCGGGACGATCTACGTCGCCGTGACGGGTAATGCGATCAAATGGTTTC CCGATCATCGCGGGCTGGCCGCGGGTTTGACCGCAGCCGGCTTTGGCGGCGGCTCCGCGCTGACGCTGATCCCGATTTCG GCCACCATCAAGGCGATCGGCTGGGAACATGCAATGGTGACCTGGGGGACGATCCAGGCCGTGGTCGTGCTGGGCATGAC GTTCATTCTGCGCCACCCGCCCGCGAACTGGGCGCCGCCCGGCTGGACACCGAAGATCACGAAGACGCTCGCGCAAACCG CCGAAAGCTACACATGGCTCCAGGCGCTCAGGATGCCCGAGTTCTACCTGCTCTATCTCATTCACTTCCTGATTAGTCTC GGCGGGTTGATGACCCTCGGGAACCTCTCGGAAATTGCCCGCTATCTGCACGTCGAGACCGCCACGATCATGGGTATTTC GATCGTCGCATTTGCGGCGACGGCAAACGGCATCGGCAGCGTGGCATCGCGGATCTTCTGGGGCGTCACGTCGGACCGCC TCGGACGGGAGAACACGATGTCGGTTGTGTTCGTGCTCGAAGGCATCTTCATTTTCTGCGTCACGCAGATCACCGGCAGC CCGATTCTGTTCGTGGTCATCTTCCCGCTGATTTTCTTCGGCTACACGCAGATCAACACGCTGTTGTCCGCCACGACCGG CGATCTTTTCGGCGCTCGTCACGTGTCGGCGAACTTCGGGATGTTGTACACGGCGAAAGGTGCCGCGGCGATCTTCTCCG GGTGGGGTGCAGCCCGCGTCGCCGCCGCGTTCGCCGGTTCGTTCCAGGCGCCGTACTACATCGCTGCGGCTTGCGACCTG CTCGCCGCGGTGCTCGCCATCTTCGTGCTCAAGCCGCTCGTACGCGCCAAGCTCGCCAGCCGAAACCTCAAGAAGGAAGC CGATTCCGCCTCGACAATGATCAACGCGCAGTTGTGA
Upstream 100 bases:
>100_bases TATCCCGTCACCGATTTCTCTTCTTGCCCCTTCCGAAAGTTCTGAGTATGATTTTCATAAATAATTTTGAATTCAAAATT CAAGAAAGGAGACGCAGATC
Downstream 100 bases:
>100_bases GGCAACCCTGTTGTCAGTCGTTCGTTGCCCCAGTGGGCAACTGATAAAACCAAGGAGCAATCATGAGTCGAACCCAAGAG AAGCACAACCGGTCAGTGAG
Product: MFS superfamily oxalate/formate antiporter
Products: NA
Alternate protein names: OFA; Oxalate:formate antiport protein; Oxalate:formate exchange protein [H]
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MATREHRPTNRWLQLIAGIVAMIMVANYQYAFTLFTPGIKEHFVGTPYSSIALIFTIFVIFETWPVPVAGVLIDKFGVKL LMFIGTGLVFTGWLLGGAFAGSVKDLYLYYGVITGLGAGTIYVAVTGNAIKWFPDHRGLAAGLTAAGFGGGSALTLIPIS ATIKAIGWEHAMVTWGTIQAVVVLGMTFILRHPPANWAPPGWTPKITKTLAQTAESYTWLQALRMPEFYLLYLIHFLISL GGLMTLGNLSEIARYLHVETATIMGISIVAFAATANGIGSVASRIFWGVTSDRLGRENTMSVVFVLEGIFIFCVTQITGS PILFVVIFPLIFFGYTQINTLLSATTGDLFGARHVSANFGMLYTAKGAAAIFSGWGAARVAAAFAGSFQAPYYIAAACDL LAAVLAIFVLKPLVRAKLASRNLKKEADSASTMINAQL
Sequences:
>Translated_438_residues MATREHRPTNRWLQLIAGIVAMIMVANYQYAFTLFTPGIKEHFVGTPYSSIALIFTIFVIFETWPVPVAGVLIDKFGVKL LMFIGTGLVFTGWLLGGAFAGSVKDLYLYYGVITGLGAGTIYVAVTGNAIKWFPDHRGLAAGLTAAGFGGGSALTLIPIS ATIKAIGWEHAMVTWGTIQAVVVLGMTFILRHPPANWAPPGWTPKITKTLAQTAESYTWLQALRMPEFYLLYLIHFLISL GGLMTLGNLSEIARYLHVETATIMGISIVAFAATANGIGSVASRIFWGVTSDRLGRENTMSVVFVLEGIFIFCVTQITGS PILFVVIFPLIFFGYTQINTLLSATTGDLFGARHVSANFGMLYTAKGAAAIFSGWGAARVAAAFAGSFQAPYYIAAACDL LAAVLAIFVLKPLVRAKLASRNLKKEADSASTMINAQL >Mature_437_residues ATREHRPTNRWLQLIAGIVAMIMVANYQYAFTLFTPGIKEHFVGTPYSSIALIFTIFVIFETWPVPVAGVLIDKFGVKLL MFIGTGLVFTGWLLGGAFAGSVKDLYLYYGVITGLGAGTIYVAVTGNAIKWFPDHRGLAAGLTAAGFGGGSALTLIPISA TIKAIGWEHAMVTWGTIQAVVVLGMTFILRHPPANWAPPGWTPKITKTLAQTAESYTWLQALRMPEFYLLYLIHFLISLG GLMTLGNLSEIARYLHVETATIMGISIVAFAATANGIGSVASRIFWGVTSDRLGRENTMSVVFVLEGIFIFCVTQITGSP ILFVVIFPLIFFGYTQINTLLSATTGDLFGARHVSANFGMLYTAKGAAAIFSGWGAARVAAAFAGSFQAPYYIAAACDLL AAVLAIFVLKPLVRAKLASRNLKKEADSASTMINAQL
Specific function: Anion transporter that carries out the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation, at the plasma membrane, and in doing so catalyzes the vectorial portion of a proton-motive metabolic cycle that drives ATP
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. OFA (TC 2.A.1.11) family [H]
Homologues:
Organism=Escherichia coli, GI1789969, Length=393, Percent_Identity=22.1374045801527, Blast_Score=104, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47052; Mature: 46921
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATREHRPTNRWLQLIAGIVAMIMVANYQYAFTLFTPGIKEHFVGTPYSSIALIFTIFVI CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCHHHHHHHHHHHHH FETWPVPVAGVLIDKFGVKLLMFIGTGLVFTGWLLGGAFAGSVKDLYLYYGVITGLGAGT HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCE IYVAVTGNAIKWFPDHRGLAAGLTAAGFGGGSALTLIPISATIKAIGWEHAMVTWGTIQA EEEEEECCEEEECCCCCCCHHCCHHCCCCCCCEEEEEEEHHHHHHHCCCCCEEEHHHHHH VVVLGMTFILRHPPANWAPPGWTPKITKTLAQTAESYTWLQALRMPEFYLLYLIHFLISL HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GGLMTLGNLSEIARYLHVETATIMGISIVAFAATANGIGSVASRIFWGVTSDRLGRENTM HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCCHHH SVVFVLEGIFIFCVTQITGSPILFVVIFPLIFFGYTQINTLLSATTGDLFGARHVSANFG HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCC MLYTAKGAAAIFSGWGAARVAAAFAGSFQAPYYIAAACDLLAAVLAIFVLKPLVRAKLAS EEEECCCHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNLKKEADSASTMINAQL HHHHHHCCHHHHEEEECC >Mature Secondary Structure ATREHRPTNRWLQLIAGIVAMIMVANYQYAFTLFTPGIKEHFVGTPYSSIALIFTIFVI CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCHHHHHHHHHHHHH FETWPVPVAGVLIDKFGVKLLMFIGTGLVFTGWLLGGAFAGSVKDLYLYYGVITGLGAGT HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCE IYVAVTGNAIKWFPDHRGLAAGLTAAGFGGGSALTLIPISATIKAIGWEHAMVTWGTIQA EEEEEECCEEEECCCCCCCHHCCHHCCCCCCCEEEEEEEHHHHHHHCCCCCEEEHHHHHH VVVLGMTFILRHPPANWAPPGWTPKITKTLAQTAESYTWLQALRMPEFYLLYLIHFLISL HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GGLMTLGNLSEIARYLHVETATIMGISIVAFAATANGIGSVASRIFWGVTSDRLGRENTM HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCCHHH SVVFVLEGIFIFCVTQITGSPILFVVIFPLIFFGYTQINTLLSATTGDLFGARHVSANFG HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCC MLYTAKGAAAIFSGWGAARVAAAFAGSFQAPYYIAAACDLLAAVLAIFVLKPLVRAKLAS EEEECCCHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNLKKEADSASTMINAQL HHHHHHCCHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8636101; 9651403; 11919184; 11113128; 11274108; 11500368 [H]