| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is prfC [C]
Identifier: 91214029
GI number: 91214029
Start: 4987089
End: 4987190
Strand: Direct
Name: prfC [C]
Synonym: UTI89_C5084
Alternate gene names: 91214029
Gene position: 4987089-4987190 (Clockwise)
Preceding gene: 91214028
Following gene: 91214030
Centisome position: 98.45
GC content: 42.16
Gene sequence:
>102_bases ATGCCGCTTACTCAAGAAGAAAGAATTATGACGTTGTCTCCTTATTTGCAAGAGGTGGCGAAGCGCCGCACTTTTGCCAT TATTTCTCACCCCAATAATTAA
Upstream 100 bases:
>100_bases GTTGCACGAACTGGAGCAGCTCCTGTGTAAACACTGATTGCCTCCCCCCCGTTGATGGGTAAAATAGCCGCAATTTTTCG TTTTCAACAAGCGCGGCGCG
Downstream 100 bases:
>100_bases GTCCAAATTAAAGCTCTTTCACTCTTTCAAAATCCTTTCAGTTAATTGAGGTCGAGCTATATAACTCATTTAAATACATT TGGTTATGTGACTTCTTTAA
Product: peptide chain release factor RF-3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 33; Mature: 32
Protein sequence:
>33_residues MPLTQEERIMTLSPYLQEVAKRRTFAIISHPNN
Sequences:
>Translated_33_residues MPLTQEERIMTLSPYLQEVAKRRTFAIISHPNN >Mature_32_residues PLTQEERIMTLSPYLQEVAKRRTFAIISHPNN
Specific function: Increases The Formation Of Ribosomal Termination Complexes And Stimulates Activities Of Rf-1 And Rf-2. It Binds Guanine Nucleotides And Has Strong Preference For Uga Stop Codons. It May Interact Directly With The Ribosome. The Stimulation Of Rf- 1 And Rf
COG id: COG4108
COG function: function code J; Peptide chain release factor RF-3
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3886; Mature: 3754
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTQEERIMTLSPYLQEVAKRRTFAIISHPNN CCCCCCCCEEEECHHHHHHHHCCEEEEEECCCC >Mature Secondary Structure PLTQEERIMTLSPYLQEVAKRRTFAIISHPNN CCCCCCCEEEECHHHHHHHHCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA