| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yjiP [H]
Identifier: 91213995
GI number: 91213995
Start: 4950058
End: 4950978
Strand: Direct
Name: yjiP [H]
Synonym: UTI89_C5047
Alternate gene names: 91213995
Gene position: 4950058-4950978 (Clockwise)
Preceding gene: 91213984
Following gene: 91213996
Centisome position: 97.72
GC content: 47.45
Gene sequence:
>921_bases ATGACAAACTTTACGACCAGCACGCCGCATGACGCATTATTTAAATCCTTTCTCACACACTCTGACACCGCGCGGGATTT TATGGAGATCCACTTACCCAAAGATTTACGTGAACTGTGCGATCTCGATAGCTTAAAACTGGAATCCGCCAGCTTTGTCG ATGAAAAATTGCGGGCGCTACATTCCGATATTCTGTGGTCGGTAAAGACCCGTGAAGGCGATGGCTATATTTATGTAGTG ATTGAACATCAGAGCCGTGAGGATATTCATATGGCCTTTCGTCTGATGCGATATTCCATGGCGGTGATGCAGCGCCATAT CGAACATGATAAACGCCGGCAGCTACCACTGGTCATCCCGATGCTGTTTTATCACGGTAGCCGTAGCCCTTATCCCTGGT CTTTGTGCTGGCTGGACGAATTTGCCGACCCAACTACCGCACGGAAGCTTTATACCGCCGCGTTCCCGCTGGTGGATATC ACTGTCGTGCCAGACGACGAGATTGTGCAGCATCGCAGAGTCGCCCTGTTGGAGTTGATCCAAAAGCATATTCGCCAGCG CGATCTGATGGGGCTTATTGACCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGT TAAATTACATTTTACTGACTGGTGATGAAGCGCGTTTTAATGAGTTTATCAGTGAAATTACCCGTCGACTGCCACAACAA AGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATATATAAAAGGGGAACAGCGCATTCTTCGATTGTT TTTGCAGAATGGGGTAGATCCTGAATGGATACAAAAGATTACCGGACTTTCGGCAGAGCAAATACAGGCATTAGAGCAGC CCTTGCCTGAGCGTGAGCCTTATTCATGGCTCAAGAGCTAA
Upstream 100 bases:
>100_bases ATAGCCTGGAAACCGCCTCGGGGAATAGGAAATAGCCAGGTGTGAATGGCTTTGTTAGTCGCTAAAGTTGGGCCATCTTA TCTACAGGTGACGGATCGCC
Downstream 100 bases:
>100_bases TCAGAGACGGATGACAAACGCAAAGCTGCCTGATGCGCTACGCTTATCAGACCTACATTATCTCTGCAATCTATTGAATT TGCGCGGTTTGTAGGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTNFTTSTPHDALFKSFLTHSDTARDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRALHSDILWSVKTREGDGYIYVV IEHQSREDIHMAFRLMRYSMAVMQRHIEHDKRRQLPLVIPMLFYHGSRSPYPWSLCWLDEFADPTTARKLYTAAFPLVDI TVVPDDEIVQHRRVALLELIQKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYILLTGDEARFNEFISEITRRLPQQ RERIMTIAERIHNDGYIKGEQRILRLFLQNGVDPEWIQKITGLSAEQIQALEQPLPEREPYSWLKS
Sequences:
>Translated_306_residues MTNFTTSTPHDALFKSFLTHSDTARDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRALHSDILWSVKTREGDGYIYVV IEHQSREDIHMAFRLMRYSMAVMQRHIEHDKRRQLPLVIPMLFYHGSRSPYPWSLCWLDEFADPTTARKLYTAAFPLVDI TVVPDDEIVQHRRVALLELIQKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYILLTGDEARFNEFISEITRRLPQQ RERIMTIAERIHNDGYIKGEQRILRLFLQNGVDPEWIQKITGLSAEQIQALEQPLPEREPYSWLKS >Mature_305_residues TNFTTSTPHDALFKSFLTHSDTARDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRALHSDILWSVKTREGDGYIYVVI EHQSREDIHMAFRLMRYSMAVMQRHIEHDKRRQLPLVIPMLFYHGSRSPYPWSLCWLDEFADPTTARKLYTAAFPLVDIT VVPDDEIVQHRRVALLELIQKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYILLTGDEARFNEFISEITRRLPQQR ERIMTIAERIHNDGYIKGEQRILRLFLQNGVDPEWIQKITGLSAEQIQALEQPLPEREPYSWLKS
Specific function: Unknown
COG id: COG5464
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]
Homologues:
Organism=Escherichia coli, GI1788643, Length=294, Percent_Identity=62.9251700680272, Blast_Score=383, Evalue=1e-108, Organism=Escherichia coli, GI1789816, Length=293, Percent_Identity=56.6552901023891, Blast_Score=354, Evalue=4e-99, Organism=Escherichia coli, GI1788577, Length=296, Percent_Identity=56.7567567567568, Blast_Score=340, Evalue=9e-95, Organism=Escherichia coli, GI1786324, Length=295, Percent_Identity=49.1525423728814, Blast_Score=285, Evalue=2e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010106 - InterPro: IPR006842 [H]
Pfam domain/function: PF04754 Transposase_31 [H]
EC number: NA
Molecular weight: Translated: 35855; Mature: 35724
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNFTTSTPHDALFKSFLTHSDTARDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRAL CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCHHCCHHHHHHHHHHHHH HSDILWSVKTREGDGYIYVVIEHQSREDIHMAFRLMRYSMAVMQRHIEHDKRRQLPLVIP HHHHHEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH MLFYHGSRSPYPWSLCWLDEFADPTTARKLYTAAFPLVDITVVPDDEIVQHRRVALLELI HHHHCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHH QKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYILLTGDEARFNEFISEITRRLPQQ HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RERIMTIAERIHNDGYIKGEQRILRLFLQNGVDPEWIQKITGLSAEQIQALEQPLPEREP HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCC YSWLKS HHHHCC >Mature Secondary Structure TNFTTSTPHDALFKSFLTHSDTARDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRAL CCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCHHCCHHHHHHHHHHHHH HSDILWSVKTREGDGYIYVVIEHQSREDIHMAFRLMRYSMAVMQRHIEHDKRRQLPLVIP HHHHHEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH MLFYHGSRSPYPWSLCWLDEFADPTTARKLYTAAFPLVDITVVPDDEIVQHRRVALLELI HHHHCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHH QKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYILLTGDEARFNEFISEITRRLPQQ HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RERIMTIAERIHNDGYIKGEQRILRLFLQNGVDPEWIQKITGLSAEQIQALEQPLPEREP HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCC YSWLKS HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]