| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yfjX [H]
Identifier: 91213939
GI number: 91213939
Start: 4893522
End: 4894007
Strand: Direct
Name: yfjX [H]
Synonym: UTI89_C4991
Alternate gene names: 91213939
Gene position: 4893522-4894007 (Clockwise)
Preceding gene: 91213938
Following gene: 91213942
Centisome position: 96.6
GC content: 54.32
Gene sequence:
>486_bases ATGACAACCTCTTCGCATAATTCCACCACACCTTCTGTTTCCGTGGCCGCTGCATCAGGGAATAACCAGTCTCAGTTGGT TGCCACTCCCGTCCCTGATGAACAGCGCATCAGCTTCTGGCCGCAGCATTTTGGCCTCATTCCACAGTGGGTCACCCTGG AGCCCCGTGTCTTCGGCTGGATGGACCGTCTGTGCGAAAACTACTGCGGGGGTATCTGGAATCTGTACACCCTGAACAAC GGTGGCGCATTTATAGCACCTGAACCGGATGAAGATGATGGAGAAACCTGGATACTGTTCAATGCCATGAACGGTAACCG CGCTGAAATGAGCCCGGAAGCTGCCGGCATTGCCGCCTGTCTGATGACGTACAGCCATCATGCCTGTCGTACGGAGAATT ATGCCATGACGGTCCATTATTACCGGTTGCGGGATTACGCCCTGCAGCATCCGGAATGCAGCGCCATTATGCGCATCATT GACTGA
Upstream 100 bases:
>100_bases CCTGCGCTGATACCGTTTCCCTGAAAGCGCAGTCCTGTTCACGGCTGTCCCTTCCCCCAGACATTCCACCATTCATTTAC TTTTTATAAGGAATAATCTC
Downstream 100 bases:
>100_bases AAGGGGCCGGAATAATGCAACAGATTTCCTTTCTGCCCGGAGAAATGACGCCCGGCGAGCGCAGTCACATTCTGCGGGCC CTGAAAACCCTGGACCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTTSSHNSTTPSVSVAAASGNNQSQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCENYCGGIWNLYTLNN GGAFIAPEPDEDDGETWILFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTENYAMTVHYYRLRDYALQHPECSAIMRII D
Sequences:
>Translated_161_residues MTTSSHNSTTPSVSVAAASGNNQSQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCENYCGGIWNLYTLNN GGAFIAPEPDEDDGETWILFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTENYAMTVHYYRLRDYALQHPECSAIMRII D >Mature_160_residues TTSSHNSTTPSVSVAAASGNNQSQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCENYCGGIWNLYTLNNG GAFIAPEPDEDDGETWILFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTENYAMTVHYYRLRDYALQHPECSAIMRIID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the antirestriction protein family [H]
Homologues:
Organism=Escherichia coli, GI1788996, Length=161, Percent_Identity=65.2173913043478, Blast_Score=219, Evalue=5e-59, Organism=Escherichia coli, GI1786442, Length=153, Percent_Identity=66.0130718954248, Blast_Score=218, Evalue=1e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004914 - ProDom: PD012854 [H]
Pfam domain/function: PF03230 Antirestrict [H]
EC number: NA
Molecular weight: Translated: 18047; Mature: 17916
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSSHNSTTPSVSVAAASGNNQSQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGW CCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCEECHHHCCCCCCEEEECCHHHHH MDRLCENYCGGIWNLYTLNNGGAFIAPEPDEDDGETWILFNAMNGNRAEMSPEAAGIAAC HHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHH LMTYSHHACRTENYAMTVHYYRLRDYALQHPECSAIMRIID HHHHHCCCCCCCCEEEEEEEEEEEHHHCCCCCHHHHHHHCC >Mature Secondary Structure TTSSHNSTTPSVSVAAASGNNQSQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGW CCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCEECHHHCCCCCCEEEECCHHHHH MDRLCENYCGGIWNLYTLNNGGAFIAPEPDEDDGETWILFNAMNGNRAEMSPEAAGIAAC HHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHH LMTYSHHACRTENYAMTVHYYRLRDYALQHPECSAIMRIID HHHHHCCCCCCCCEEEEEEEEEEEHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]