| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yfjP [H]
Identifier: 91213932
GI number: 91213932
Start: 4889692
End: 4890576
Strand: Direct
Name: yfjP [H]
Synonym: UTI89_C4984
Alternate gene names: 91213932
Gene position: 4889692-4890576 (Clockwise)
Preceding gene: 91213930
Following gene: 91213933
Centisome position: 96.52
GC content: 53.56
Gene sequence:
>885_bases ATGTCATTCAGCCATTTTTCCCTCTCCGCACAAGTGAAATCATATCTGACGTTTCTTCCTGAAGAAATTCGCCAGAAAAT CCTTGAACATCTCCACGGTGTTATTCATTACGAGCCCGTGATTGGCATTATGGGTAAATCCGGCACCGGCAAAAGCAGCC TGTGTAATGCCATTTTTCAGTCCCGTATCTGCGCCACGCATCCCCTGAACGGCTGCACCCGCCAGGCTCATCGTCTTACC CTGCAGCTCGGTGAACGCAGAATGACGCTGGTCGATCTGCCCGGCATTGGTGAAACACCGCAGCATGATCAGGAATACCA GGCGCTTTATCGTCAGTTACTGCCGGAACTGGATCTGATTATCTGGATCCTGCGGAGTGATGAACGTGCGTATGCTGCCG ATATTGCCATGCATCAGTTTTTACTGAATGAGGGCGCAGATCCCTCGCGCTTTTTGTTTGTTCTCAGCCATGCCGATCGC ATGTTTCCTGCTGAAGAATGGAATGCCACAGAAAAATGCCCGTCCCGTCACCAGGAACTCTCACTGGCGACAGTAACAGC CCGGGTGGCCACCCTGTTCCCTTCATCATTTCCGGTACTCCCTGTAGCCGCGCCTGCAGGCTGGAACCTTCCAGCGCTGG TGTCACTGATGATCCACGCGCTGCCACCACAGGCAACCAGCGCAGTTTATTCACATATCCGGGGGGAAAACCGCTCTGAA CAGGCCCGGAAACACGCACAACAGACTTTTGGTGATGCCATCGGGAAAAGTTTTGACGACGCCGTTGCCCGGTTCAGTTT TCCGGCCTGGATGTTACAGCTTCTGCGTAAAGCCCGGGACCGCATTATCCACCTGCTGATCACACTGTGGGAGCGTCTGT TCTGA
Upstream 100 bases:
>100_bases ACTCTTCTTCCCGTCAATGGAAAATTTTTCACACCCATATTACCTGAATGATAAACCGGATTAGTGTGATCCGGTTCAGC GAAATCAACAGGATAACGGT
Downstream 100 bases:
>100_bases CACACTCACGCCGACAGGATGTGTCGCTGGATTAACGAGCATTCTTCTTTTTATGAAATCCTGCTTAAAAATCAGATAAT TAAAAGAATATTTTTTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSFSHFSLSAQVKSYLTFLPEEIRQKILEHLHGVIHYEPVIGIMGKSGTGKSSLCNAIFQSRICATHPLNGCTRQAHRLT LQLGERRMTLVDLPGIGETPQHDQEYQALYRQLLPELDLIIWILRSDERAYAADIAMHQFLLNEGADPSRFLFVLSHADR MFPAEEWNATEKCPSRHQELSLATVTARVATLFPSSFPVLPVAAPAGWNLPALVSLMIHALPPQATSAVYSHIRGENRSE QARKHAQQTFGDAIGKSFDDAVARFSFPAWMLQLLRKARDRIIHLLITLWERLF
Sequences:
>Translated_294_residues MSFSHFSLSAQVKSYLTFLPEEIRQKILEHLHGVIHYEPVIGIMGKSGTGKSSLCNAIFQSRICATHPLNGCTRQAHRLT LQLGERRMTLVDLPGIGETPQHDQEYQALYRQLLPELDLIIWILRSDERAYAADIAMHQFLLNEGADPSRFLFVLSHADR MFPAEEWNATEKCPSRHQELSLATVTARVATLFPSSFPVLPVAAPAGWNLPALVSLMIHALPPQATSAVYSHIRGENRSE QARKHAQQTFGDAIGKSFDDAVARFSFPAWMLQLLRKARDRIIHLLITLWERLF >Mature_293_residues SFSHFSLSAQVKSYLTFLPEEIRQKILEHLHGVIHYEPVIGIMGKSGTGKSSLCNAIFQSRICATHPLNGCTRQAHRLTL QLGERRMTLVDLPGIGETPQHDQEYQALYRQLLPELDLIIWILRSDERAYAADIAMHQFLLNEGADPSRFLFVLSHADRM FPAEEWNATEKCPSRHQELSLATVTARVATLFPSSFPVLPVAAPAGWNLPALVSLMIHALPPQATSAVYSHIRGENRSEQ ARKHAQQTFGDAIGKSFDDAVARFSFPAWMLQLLRKARDRIIHLLITLWERLF
Specific function: Unknown
COG id: COG3596
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ykfA and yeeP [H]
Homologues:
Organism=Escherichia coli, GI48994902, Length=292, Percent_Identity=34.5890410958904, Blast_Score=187, Evalue=7e-49, Organism=Escherichia coli, GI87081706, Length=289, Percent_Identity=34.2560553633218, Blast_Score=181, Evalue=7e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 33215; Mature: 33083
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSHFSLSAQVKSYLTFLPEEIRQKILEHLHGVIHYEPVIGIMGKSGTGKSSLCNAIFQ CCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCHHHHHHHHHH SRICATHPLNGCTRQAHRLTLQLGERRMTLVDLPGIGETPQHDQEYQALYRQLLPELDLI HHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHH IWILRSDERAYAADIAMHQFLLNEGADPSRFLFVLSHADRMFPAEEWNATEKCPSRHQEL EEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHCCCHHHCHHHHHHH SLATVTARVATLFPSSFPVLPVAAPAGWNLPALVSLMIHALPPQATSAVYSHIRGENRSE HHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHH QARKHAQQTFGDAIGKSFDDAVARFSFPAWMLQLLRKARDRIIHLLITLWERLF HHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SFSHFSLSAQVKSYLTFLPEEIRQKILEHLHGVIHYEPVIGIMGKSGTGKSSLCNAIFQ CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCHHHHHHHHHH SRICATHPLNGCTRQAHRLTLQLGERRMTLVDLPGIGETPQHDQEYQALYRQLLPELDLI HHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHH IWILRSDERAYAADIAMHQFLLNEGADPSRFLFVLSHADRMFPAEEWNATEKCPSRHQEL EEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHCCCHHHCHHHHHHH SLATVTARVATLFPSSFPVLPVAAPAGWNLPALVSLMIHALPPQATSAVYSHIRGENRSE HHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHH QARKHAQQTFGDAIGKSFDDAVARFSFPAWMLQLLRKARDRIIHLLITLWERLF HHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]