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The map label for this gene is yjfF [H]

Identifier: 91213784

GI number: 91213784

Start: 4733401

End: 4734396

Strand: Direct

Name: yjfF [H]

Synonym: UTI89_C4835

Alternate gene names: 91213784

Gene position: 4733401-4734396 (Clockwise)

Preceding gene: 91213783

Following gene: 91213786

Centisome position: 93.44

GC content: 51.41

Gene sequence:

>996_bases
GTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTTGTGTTGGGTTATATCTACTGTCTGACCCAGTTTCC
CGGTTTTGCTTCCACAAGAGTGATCTGCAATATCCTGACCGATAATGCCTTTCTTGGGATAATCGCCGTTGGCATGACCT
TTGTGATCCTCTCCGGTGGGATCGATCTCTCCGTCGGTTCGGTGATCGCCTTTACCGGCGTGTTTCTGGCAAAAGTGATT
GGCGATTTCGGCCTCTCGCCGCTGCTGGCGTTTCCGCTGGTGTTGGTGATGGGCTGTGCCTTCGGCGCATTTATGGGGCT
TCTGATTGATGCCCTGAAGATCCCGGCGTTTATCATTACCCTTGCGGGAATGTTCTTTTTGCGTGGCGTCAGCTATCTCG
TTTCGGAAGAGTCGATCCCGATAAACCATCCTGTTTATGACACGCTCTCAAGCCTTGCGTGGAAAATCCCTGGCGGTGGT
CGCTTAAGTGCGATGGGACTACTGATGCTGGCGGTGGTGGTTATCGGCATATTACTCGCGCATCGTACCCGTTTTGGTAA
TCAGGTATACGCCATTGGCGGCAACGCAACGTCGGCAAACCTGATGGGGATTTCCACTCGCAGCACCACTATTCGCATTT
ATATGCTCTCCACCGGACTGGCAACGCTGGCGGGGATTGTCTTCTCGATTTATACCCAGGCCGGATATGCACTGGCGGGC
GTAGGTGTGGAACTGGATGCTATCGCCTCAGTGGTAATTGGCGGTACGCTTTTGAGTGGTGGCGTTGGAACGGTATTAGG
GACGCTTTTTGGCGTGGCGATTCAGGGACTGATTCAGACTTACATAAACTTTGATGGCACGCTGAGTTCCTGGTGGACGA
AAATCGCCATCGGTATTTTGTTGTTTATTTTTATAGCATTACAGCGTGGATTAACGGTGCTGTGGGAGAATCGTCAGAGT
TCGCCAGTGACAAGAGTCAACATTGCGCAGCGATAA

Upstream 100 bases:

>100_bases
CCGCCGGAGATGAACCAGGTGGTGAAAGCGGTGGTGGTGCTTTGCGTGCTGATTGTCCAGTCGCAACGCTTTATCAGTCT
GATTAAAGGGGTACGTAACC

Downstream 100 bases:

>100_bases
AAACGCCTCTCCGTGTGGAGAGGCGCAGGAGCTTACGCGTCCGGGAACTCACGGATAAAGCGTTCGACATCTTCAACCAT
ATGGTCGTTGCCGACAAAGA

Product: inner membrane ABC transporter permease YjfF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MIKRNLPLMITIGVFVLGYIYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGGIDLSVGSVIAFTGVFLAKVI
GDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIITLAGMFFLRGVSYLVSEESIPINHPVYDTLSSLAWKIPGGG
RLSAMGLLMLAVVVIGILLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAG
VGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGILLFIFIALQRGLTVLWENRQS
SPVTRVNIAQR

Sequences:

>Translated_331_residues
MIKRNLPLMITIGVFVLGYIYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGGIDLSVGSVIAFTGVFLAKVI
GDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIITLAGMFFLRGVSYLVSEESIPINHPVYDTLSSLAWKIPGGG
RLSAMGLLMLAVVVIGILLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAG
VGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGILLFIFIALQRGLTVLWENRQS
SPVTRVNIAQR
>Mature_331_residues
MIKRNLPLMITIGVFVLGYIYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGGIDLSVGSVIAFTGVFLAKVI
GDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIITLAGMFFLRGVSYLVSEESIPINHPVYDTLSSLAWKIPGGG
RLSAMGLLMLAVVVIGILLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAG
VGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGILLFIFIALQRGLTVLWENRQS
SPVTRVNIAQR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082395, Length=331, Percent_Identity=98.7915407854985, Blast_Score=639, Evalue=0.0,
Organism=Escherichia coli, GI1790191, Length=301, Percent_Identity=36.5448504983389, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1788896, Length=279, Percent_Identity=36.9175627240143, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1789992, Length=314, Percent_Identity=32.1656050955414, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI145693152, Length=271, Percent_Identity=32.8413284132841, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI1790524, Length=282, Percent_Identity=30.8510638297872, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1787793, Length=322, Percent_Identity=30.1242236024845, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI145693214, Length=257, Percent_Identity=34.2412451361868, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34958; Mature: 34958

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRNLPLMITIGVFVLGYIYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
IDLSVGSVIAFTGVFLAKVIGDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIIT
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGMFFLRGVSYLVSEESIPINHPVYDTLSSLAWKIPGGGRLSAMGLLMLAVVVIGILLA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH
HRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAG
HHHHCCCEEEEECCCCCCCEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEE
VGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGIL
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LFIFIALQRGLTVLWENRQSSPVTRVNIAQR
HHHHHHHHCCCEEEECCCCCCCCEEEECCCC
>Mature Secondary Structure
MIKRNLPLMITIGVFVLGYIYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
IDLSVGSVIAFTGVFLAKVIGDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIIT
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGMFFLRGVSYLVSEESIPINHPVYDTLSSLAWKIPGGGRLSAMGLLMLAVVVIGILLA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH
HRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAG
HHHHCCCEEEEECCCCCCCEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEE
VGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGIL
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LFIFIALQRGLTVLWENRQSSPVTRVNIAQR
HHHHHHHHCCCEEEECCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 2843822; 7984428 [H]