| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yjeM [H]
Identifier: 91213708
GI number: 91213708
Start: 4655596
End: 4657140
Strand: Direct
Name: yjeM [H]
Synonym: UTI89_C4756
Alternate gene names: 91213708
Gene position: 4655596-4657140 (Clockwise)
Preceding gene: 91213707
Following gene: 91213709
Centisome position: 91.9
GC content: 46.8
Gene sequence:
>1545_bases GTGGGCGCGTTTTATACACGCGCTGAAATGAAGGATGGTTTCATGCCTCACTCGATAAAAAAGATGAGTCTGATAGGACT CATATTGATGATCTTTACTTCTGTATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTC CCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTGCTTATCGCAAA GAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTC CTCTTATATCATCTGGATGGTGAGTACCTCCGCGAAAGTTTGGGTACCGTTCTCAACATTCCTCTACGGTAGCGACATGA CCCAGCACTGGCATATTGCCGGACTGGAGCCTACGCAGGTGGTTGGTCTGCTGGCAGTGGCATGGATGATTCTGGTCACC GTCGTTGCTTCAAAAGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGT ATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGA ACCCAGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCCATTTTTGCCTATGGCGGAATTGAAGCGGTT GGTGGTCTAGTTGATAAAACGGAAAATCCAGAAAAGAACTTTGCCAAAGGTATTGTTTTTGCCGCTATTGTTATTTCAAT CGGTTATTCGCTGGCAATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCG GCAATATTACCTATGTGCTGATGAAGAGCCTCGGGGTGACGCTGGGTAACGCACTGCATTTGTCACCTGAAGCGTCATTG TCGCTGGGCGTATGGTTTGCGCGTATTACCGGACTGTCGATGTTCCTCGCTTATACCGGTGCGTTCTTTACACTTTGCTA TTCACCGCTGAAAGCCATCATCCAGGGGACGCCGAAAGCATTGTGGCCGGAACCGATGACGCGCCTGAATGCGATGGGGA TGCCGTCTATCGCCATGTGGATGCAGTGTGGGTTGGTTACTGTCTTCATCCTGCTGGTTTCGTTTGGTGGCGGTACCGCA TCGGCGTTCTTTAACAAGCTGACGCTGATGGCGAACGTGTCTATGACGCTTCCTTACCTGTTCCTCGCGCTGGCTTTCCC ATTTTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATATGTCGGCAATGATTGCAACAGTGG TTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCTGGAGACTGGGACAGCACA TTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGTCGCATGGCGAA CAAACCTGAGTTAGCTCTCGACTGA
Upstream 100 bases:
>100_bases GCTAAAGGCCACAATTTAAGACTGGATATTTGATATCATCCAGGTATCAATTCTGTATTGGTTTTTACGCTGCCCGCTCA ATGTTGGGCAGTGCAGTTCA
Downstream 100 bases:
>100_bases TCATATGAAATCCTGCAACTCATCGTCTCTCCGGCGATGAGTTGTCTGGAAAGGAAGACGTTATGGACGACGCTAGTCGG GATCCAGTGATAACCGAAGA
Product: transporter YjeM
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MGAFYTRAEMKDGFMPHSIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIFSALLFFIPFALMMAEMGAAYRK EEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLYGSDMTQHWHIAGLEPTQVVGLLAVAWMILVT VVASKGINKIARITAVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAV GGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVLMKSLGVTLGNALHLSPEASL SLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTA SAFFNKLTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTHMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDST LWMIGGPVFFSLLAMAIYQNYCSRMANKPELALD
Sequences:
>Translated_514_residues MGAFYTRAEMKDGFMPHSIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIFSALLFFIPFALMMAEMGAAYRK EEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLYGSDMTQHWHIAGLEPTQVVGLLAVAWMILVT VVASKGINKIARITAVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAV GGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVLMKSLGVTLGNALHLSPEASL SLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTA SAFFNKLTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTHMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDST LWMIGGPVFFSLLAMAIYQNYCSRMANKPELALD >Mature_513_residues GAFYTRAEMKDGFMPHSIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIFSALLFFIPFALMMAEMGAAYRKE EGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLYGSDMTQHWHIAGLEPTQVVGLLAVAWMILVTV VASKGINKIARITAVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAVG GLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVLMKSLGVTLGNALHLSPEASLS LGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTAS AFFNKLTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTHMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDSTL WMIGGPVFFSLLAMAIYQNYCSRMANKPELALD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Escherichia coli, GI87082380, Length=500, Percent_Identity=97.8, Blast_Score=970, Evalue=0.0, Organism=Escherichia coli, GI87081798, Length=463, Percent_Identity=22.4622030237581, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI48994921, Length=454, Percent_Identity=24.2290748898678, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1787768, Length=471, Percent_Identity=23.7791932059448, Blast_Score=87, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 56244; Mature: 56113
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAFYTRAEMKDGFMPHSIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIFSA CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHH LLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKV HHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCEE WVPFSTFLYGSDMTQHWHIAGLEPTQVVGLLAVAWMILVTVVASKGINKIARITAVGGIA EEEHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAV HHHHHHHHHHHHHHHHHHCCCCHHHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH GGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVL HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHH MKSLGVTLGNALHLSPEASLSLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKA HHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTASAFFNKLTLMANVSMTLPYL CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FLALAFPFFKARQDLDRPFVIFKTHMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDST HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LWMIGGPVFFSLLAMAIYQNYCSRMANKPELALD EEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GAFYTRAEMKDGFMPHSIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIFSA CCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHH LLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKV HHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCEE WVPFSTFLYGSDMTQHWHIAGLEPTQVVGLLAVAWMILVTVVASKGINKIARITAVGGIA EEEHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAV HHHHHHHHHHHHHHHHHHCCCCHHHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH GGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVL HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHH MKSLGVTLGNALHLSPEASLSLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKA HHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTASAFFNKLTLMANVSMTLPYL CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FLALAFPFFKARQDLDRPFVIFKTHMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDST HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LWMIGGPVFFSLLAMAIYQNYCSRMANKPELALD EEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]