| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is cdh [H]
Identifier: 91213459
GI number: 91213459
Start: 4386700
End: 4387647
Strand: Direct
Name: cdh [H]
Synonym: UTI89_C4502
Alternate gene names: 91213459
Gene position: 4386700-4387647 (Clockwise)
Preceding gene: 91213458
Following gene: 91213462
Centisome position: 86.6
GC content: 49.26
Gene sequence:
>948_bases TTGATGAAGAGTTCGGCGGCTGGACGAAAGCGCAAAAAGAGCATTTTGCTAACGGCGGTACGTTCGATCAGATCAGCAAA CGCTGATTTCCCCAGGATAATTATCAAGCCCGGTGGTTTCTCGCCACTGGGTTTTTTATTTGTCACGATTTTGCGTTACC CTTGCATCTCTTTGAGGTACAGGGAAAAAAAGATGAAAAAAGCGGGTCTTCTTTTTTTGGTGATGATAGTTATCGCCGTT GTGGCTACCGGTATTGGTTACTGGAAATTAACCGGTGAAGAGTCAGACACGTTACGTAAGATTGTTCTTGAGCAATGTTT GCCCAACCAGCAGGAAAACCAAAACCCGTCGCCATGTGCGGAAGTCAAACCCAACGCCGGATACGTGGTTTTAAAAGATC GTCATGGCCCACTGCAATATCTGTTGATGCCAACGTACCGTATTAACGGTACTGAAAGCCCATTGTTGACCGATCCGTCA ACGCCTAATTTTTTCTGGTTAGCCTGGCAGGCGCGTGATTTTATGAGCCAAAAATACGGCCAGCCTGTTCCCGATCGCGC GGTATCTCTGGCGATCAACTCCCGCACCGGGCGTACGCAAAACCATTTTCATATTCATATTTCTTGTATTCGTCCTGATG TGCGCGAACAGCTGGATAACAATCTGGCGAACATCAGTAGCCGCTGGTTGCCACTGCCAGGTGGTTTGCGTGGGCATGAG TACCTGGCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCGGAAGAAGTGCCTGAGGC GCGGGAACATATGGGAAGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAA ATCTACTGACGCTGAACCGTGCTTCAGCCGAGGAAATCCAGGATCATCAGTGTGAGATTTTGCGTTAA
Upstream 100 bases:
>100_bases GAAGGTCAGGAAATTGCAGCGAAAAACTACTACCGTCCGCGCGACGCTGAGGTAGCGAAAAAGTACGAAAATGCGTTTCC AAAATTGAAGTTATTCACCA
Downstream 100 bases:
>100_bases GGCGAGGAGTTTAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTGTCAGACTTAAGCCTGTTTAGCCGCTTCTGCAG CTTTAACGATCACGGCGAAA
Product: CDP-diacylglycerol pyrophosphatase
Products: NA
Alternate protein names: CDP-diacylglycerol phosphatidylhydrolase; CDP-diglyceride hydrolase [H]
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MMKSSAAGRKRKKSILLTAVRSIRSANADFPRIIIKPGGFSPLGFLFVTILRYPCISLRYREKKMKKAGLLFLVMIVIAV VATGIGYWKLTGEESDTLRKIVLEQCLPNQQENQNPSPCAEVKPNAGYVVLKDRHGPLQYLLMPTYRINGTESPLLTDPS TPNFFWLAWQARDFMSQKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHE YLARRVTESELVQRSPFMMLAEEVPEAREHMGSYGLAMVRQSDNSFVLLATQRNLLTLNRASAEEIQDHQCEILR
Sequences:
>Translated_315_residues MMKSSAAGRKRKKSILLTAVRSIRSANADFPRIIIKPGGFSPLGFLFVTILRYPCISLRYREKKMKKAGLLFLVMIVIAV VATGIGYWKLTGEESDTLRKIVLEQCLPNQQENQNPSPCAEVKPNAGYVVLKDRHGPLQYLLMPTYRINGTESPLLTDPS TPNFFWLAWQARDFMSQKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHE YLARRVTESELVQRSPFMMLAEEVPEAREHMGSYGLAMVRQSDNSFVLLATQRNLLTLNRASAEEIQDHQCEILR >Mature_315_residues MMKSSAAGRKRKKSILLTAVRSIRSANADFPRIIIKPGGFSPLGFLFVTILRYPCISLRYREKKMKKAGLLFLVMIVIAV VATGIGYWKLTGEESDTLRKIVLEQCLPNQQENQNPSPCAEVKPNAGYVVLKDRHGPLQYLLMPTYRINGTESPLLTDPS TPNFFWLAWQARDFMSQKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHE YLARRVTESELVQRSPFMMLAEEVPEAREHMGSYGLAMVRQSDNSFVLLATQRNLLTLNRASAEEIQDHQCEILR
Specific function: Phospholipid biosynthesis. [C]
COG id: COG2134
COG function: function code I; CDP-diacylglycerol pyrophosphatase
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cdh family [H]
Homologues:
Organism=Escherichia coli, GI1790352, Length=251, Percent_Identity=96.8127490039841, Blast_Score=511, Evalue=1e-146,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003763 - InterPro: IPR015993 [H]
Pfam domain/function: PF02611 CDH [H]
EC number: =3.6.1.26 [H]
Molecular weight: Translated: 35718; Mature: 35718
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKSSAAGRKRKKSILLTAVRSIRSANADFPRIIIKPGGFSPLGFLFVTILRYPCISLRY CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCHHHHHH REKKMKKAGLLFLVMIVIAVVATGIGYWKLTGEESDTLRKIVLEQCLPNQQENQNPSPCA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC EVKPNAGYVVLKDRHGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSQKYG CCCCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCC QPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHE CCCCCCCEEEEEECCCCCCCCEEEEEEEEECCHHHHHHHCHHHHHHHCCCCCCCCCCHHH YLARRVTESELVQRSPFMMLAEEVPEAREHMGSYGLAMVRQSDNSFVLLATQRNLLTLNR HHHHHHCHHHHHHCCCHHHHHHHCHHHHHHHCCCCEEEEEECCCCEEEEEECCCEEEECC ASAEEIQDHQCEILR CCHHHHHHCHHHHCC >Mature Secondary Structure MMKSSAAGRKRKKSILLTAVRSIRSANADFPRIIIKPGGFSPLGFLFVTILRYPCISLRY CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCHHHHHH REKKMKKAGLLFLVMIVIAVVATGIGYWKLTGEESDTLRKIVLEQCLPNQQENQNPSPCA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC EVKPNAGYVVLKDRHGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSQKYG CCCCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCC QPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHE CCCCCCCEEEEEECCCCCCCCEEEEEEEEECCHHHHHHHCHHHHHHHCCCCCCCCCCHHH YLARRVTESELVQRSPFMMLAEEVPEAREHMGSYGLAMVRQSDNSFVLLATQRNLLTLNR HHHHHHCHHHHHHCCCHHHHHHHCHHHHHHHCCCCEEEEEECCCCEEEEEECCCEEEECC ASAEEIQDHQCEILR CCHHHHHHCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA