| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yihT [H]
Identifier: 91213421
GI number: 91213421
Start: 4349091
End: 4349978
Strand: Direct
Name: yihT [H]
Synonym: UTI89_C4464
Alternate gene names: 91213421
Gene position: 4349091-4349978 (Clockwise)
Preceding gene: 91213420
Following gene: 91213422
Centisome position: 85.85
GC content: 52.25
Gene sequence:
>888_bases ATGTCATCCCACTTCACCCCATTTACGCTGAAAGATATCTCCCGCCCAGGTGGTGGATTCGCCATGTTAGCTGTCGATCA GCGTGAGGCCATGCGCCTGATGTTTGCGGCAGCAGGGCAGCCAAAACCCATCGCCGACAGTGTACTCACCGATTTTAAAG TTGCCGCGACCCGAATCCTTTCTCCTTATGCTTCTGCCGTTCTGGCGGATAAACAATTTTGTCTTGAACAAATAGTCGAG CAGGGCGCTGTGGCTAATTCTTGCGGCCTGATTGTCGCTGCCGATCTTTTTATCCCAGGTAATGGCATCCCGGTTGATAG CGTTGAAATAGATATGTCCGTCGACCCGCATAAAGCCCGTGAAATGGGGGCTAAGGCAATGAAATTACTTGTACTCTGGC GTGAAGATGAACCCGCAGAGGAACGTCTGGCAATGGTTGATAAATTTGTTCGTCGCTGCCGTAGTGCCGGGCTGGTTAGC ATTATTGAACCTGTGGTGCGTCCACCTCGTCGCGGTTGGGACTTTGATCGTGAAAGCGCCATTGTTGCCGCCGCCGCAGA GCTTGGTGGAACAGAGGCTGATCTTTACAAAGCCGAGATGCCATTAGGGGGCAAAGGCGATGAAAAAACCTTACTTGCTG CCTGTCAGCAACTTAACGATCAGATGAAGATGCCGTGGGTAATTCTTTCTTCTGGCGTTGATGCCGATATTTTTGGCCGT GCAGTAAGTATTGCCATGAAAGGTGGTGCGTCGGGCTTCCTGGCTGGACGAGCGGTTTGGGCGTCGGTTGTTGGTGCACA AGATCCACAAACCATGCTGCGCGATGTCTCCGTTCCACGCTTGCAACGGCTGGCTGAAATTGTCGATGAAGGTATCGCGC AACGCTAA
Upstream 100 bases:
>100_bases AGCAAGTCAAGACGGCAAAGGGCGGCAGGACTGGAGCGCCCTGCTAAATCAGGTTCGCCAGCAGGCTGGTCTTTAATTTT ATCTATTAACAGGAGTTTCT
Downstream 100 bases:
>100_bases TCCCCTATGGATATCGATTCTGGAGAATAACAATGGATAAAATTACCCAGGTTTTATTTTCAGATATTGGGAAAGTCACC ACTCAATATGTTGAAGTACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSSHFTPFTLKDISRPGGGFAMLAVDQREAMRLMFAAAGQPKPIADSVLTDFKVAATRILSPYASAVLADKQFCLEQIVE QGAVANSCGLIVAADLFIPGNGIPVDSVEIDMSVDPHKAREMGAKAMKLLVLWREDEPAEERLAMVDKFVRRCRSAGLVS IIEPVVRPPRRGWDFDRESAIVAAAAELGGTEADLYKAEMPLGGKGDEKTLLAACQQLNDQMKMPWVILSSGVDADIFGR AVSIAMKGGASGFLAGRAVWASVVGAQDPQTMLRDVSVPRLQRLAEIVDEGIAQR
Sequences:
>Translated_295_residues MSSHFTPFTLKDISRPGGGFAMLAVDQREAMRLMFAAAGQPKPIADSVLTDFKVAATRILSPYASAVLADKQFCLEQIVE QGAVANSCGLIVAADLFIPGNGIPVDSVEIDMSVDPHKAREMGAKAMKLLVLWREDEPAEERLAMVDKFVRRCRSAGLVS IIEPVVRPPRRGWDFDRESAIVAAAAELGGTEADLYKAEMPLGGKGDEKTLLAACQQLNDQMKMPWVILSSGVDADIFGR AVSIAMKGGASGFLAGRAVWASVVGAQDPQTMLRDVSVPRLQRLAEIVDEGIAQR >Mature_294_residues SSHFTPFTLKDISRPGGGFAMLAVDQREAMRLMFAAAGQPKPIADSVLTDFKVAATRILSPYASAVLADKQFCLEQIVEQ GAVANSCGLIVAADLFIPGNGIPVDSVEIDMSVDPHKAREMGAKAMKLLVLWREDEPAEERLAMVDKFVRRCRSAGLVSI IEPVVRPPRRGWDFDRESAIVAAAAELGGTEADLYKAEMPLGGKGDEKTLLAACQQLNDQMKMPWVILSSGVDADIFGRA VSIAMKGGASGFLAGRAVWASVVGAQDPQTMLRDVSVPRLQRLAEIVDEGIAQR
Specific function: Unknown
COG id: COG3684
COG function: function code G; Tagatose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldolase lacD family [H]
Homologues:
Organism=Escherichia coli, GI1790314, Length=291, Percent_Identity=66.6666666666667, Blast_Score=378, Evalue=1e-106,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR017291 - InterPro: IPR002915 [H]
Pfam domain/function: PF01791 DeoC [H]
EC number: 4.1.-.- [C]
Molecular weight: Translated: 31712; Mature: 31581
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSHFTPFTLKDISRPGGGFAMLAVDQREAMRLMFAAAGQPKPIADSVLTDFKVAATRIL CCCCCCCEEHHHCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH SPYASAVLADKQFCLEQIVEQGAVANSCGLIVAADLFIPGNGIPVDSVEIDMSVDPHKAR HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCEEEECCCCHHHHH EMGAKAMKLLVLWREDEPAEERLAMVDKFVRRCRSAGLVSIIEPVVRPPRRGWDFDRESA HHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHH IVAAAAELGGTEADLYKAEMPLGGKGDEKTLLAACQQLNDQMKMPWVILSSGVDADIFGR HHHHHHHHCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH AVSIAMKGGASGFLAGRAVWASVVGAQDPQTMLRDVSVPRLQRLAEIVDEGIAQR HHEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSHFTPFTLKDISRPGGGFAMLAVDQREAMRLMFAAAGQPKPIADSVLTDFKVAATRIL CCCCCCEEHHHCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH SPYASAVLADKQFCLEQIVEQGAVANSCGLIVAADLFIPGNGIPVDSVEIDMSVDPHKAR HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCEEEECCCCHHHHH EMGAKAMKLLVLWREDEPAEERLAMVDKFVRRCRSAGLVSIIEPVVRPPRRGWDFDRESA HHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHH IVAAAAELGGTEADLYKAEMPLGGKGDEKTLLAACQQLNDQMKMPWVILSSGVDADIFGR HHHHHHHHCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH AVSIAMKGGASGFLAGRAVWASVVGAQDPQTMLRDVSVPRLQRLAEIVDEGIAQR HHEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]