| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is trxA [H]
Identifier: 91213301
GI number: 91213301
Start: 4225650
End: 4226084
Strand: Direct
Name: trxA [H]
Synonym: UTI89_C4335
Alternate gene names: 91213301
Gene position: 4225650-4226084 (Clockwise)
Preceding gene: 91213298
Following gene: 91213303
Centisome position: 83.42
GC content: 48.51
Gene sequence:
>435_bases TTGCTTTACGAAAGCGTATCCGGTGAAATAAAGTCAACCTTTAGTTGGTTAATGTTACACCAACAACGAAACCAACACGC CAGGCTTATTCCTGTGGAGTTATATATGAGCGATAAAATTATTCACCTGACTGACGACAGTTTTGACACGGATGTACTCA AAGCGGACGGGGCGATCCTCGTCGATTTCTGGGCAGAGTGGTGCGGTCCGTGCAAAATGATCGCCCCGATTCTGGATGAA ATCGCTGACGAATATCAGGGCAAACTGACCGTTGCAAAACTGAACATCGATCAAAACCCTGGCACTGCGCCGAAATATGG CATCCGTGGTATCCCGACTCTGCTGCTGTTCAAAAACGGTGAAGTGGCGGCAACCAAAGTGGGCGCACTGTCTAAAGGTC AGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAA
Upstream 100 bases:
>100_bases TTCAAGGGCTTCTACAACCTTCGGATGCAGGGCGAAGTCGGAAAACTTCTGTTCTGTTAAATGTGTTTTGCTCATAGTGT GGTAGAATATCAGCTTACTA
Downstream 100 bases:
>100_bases GGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTA TTAAACATACCTTATTAAGT
Product: thioredoxin
Products: NA
Alternate protein names: Trx-1 [H]
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MLYESVSGEIKSTFSWLMLHQQRNQHARLIPVELYMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDE IADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA
Sequences:
>Translated_144_residues MLYESVSGEIKSTFSWLMLHQQRNQHARLIPVELYMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDE IADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA >Mature_144_residues MLYESVSGEIKSTFSWLMLHQQRNQHARLIPVELYMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDE IADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI21361403, Length=92, Percent_Identity=38.0434782608696, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI5031973, Length=100, Percent_Identity=36, Blast_Score=76, Evalue=1e-14, Organism=Homo sapiens, GI21361657, Length=91, Percent_Identity=38.4615384615385, Blast_Score=74, Evalue=4e-14, Organism=Homo sapiens, GI224493972, Length=103, Percent_Identity=32.0388349514563, Blast_Score=66, Evalue=1e-11, Organism=Homo sapiens, GI42794771, Length=103, Percent_Identity=32.0388349514563, Blast_Score=66, Evalue=1e-11, Organism=Escherichia coli, GI87082331, Length=109, Percent_Identity=100, Blast_Score=224, Evalue=2e-60, Organism=Escherichia coli, GI1788936, Length=105, Percent_Identity=38.0952380952381, Blast_Score=91, Evalue=2e-20, Organism=Caenorhabditis elegans, GI212646193, Length=99, Percent_Identity=39.3939393939394, Blast_Score=84, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71998175, Length=95, Percent_Identity=41.0526315789474, Blast_Score=81, Evalue=2e-16, Organism=Caenorhabditis elegans, GI115532380, Length=118, Percent_Identity=34.7457627118644, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115532378, Length=109, Percent_Identity=35.7798165137615, Blast_Score=71, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17544108, Length=109, Percent_Identity=35.7798165137615, Blast_Score=71, Evalue=2e-13, Organism=Caenorhabditis elegans, GI115532254, Length=130, Percent_Identity=29.2307692307692, Blast_Score=66, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17509965, Length=100, Percent_Identity=32, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17556044, Length=86, Percent_Identity=34.8837209302326, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17554386, Length=88, Percent_Identity=36.3636363636364, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115532252, Length=113, Percent_Identity=30.0884955752212, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17507705, Length=75, Percent_Identity=38.6666666666667, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71980562, Length=73, Percent_Identity=35.6164383561644, Blast_Score=64, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71980565, Length=63, Percent_Identity=39.6825396825397, Blast_Score=64, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17510299, Length=110, Percent_Identity=30.9090909090909, Blast_Score=62, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6323072, Length=99, Percent_Identity=40.4040404040404, Blast_Score=77, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6321648, Length=96, Percent_Identity=34.375, Blast_Score=72, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6319925, Length=90, Percent_Identity=31.1111111111111, Blast_Score=62, Evalue=3e-11, Organism=Drosophila melanogaster, GI24639826, Length=80, Percent_Identity=41.25, Blast_Score=82, Evalue=8e-17, Organism=Drosophila melanogaster, GI28573567, Length=96, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI24664269, Length=87, Percent_Identity=36.7816091954023, Blast_Score=73, Evalue=5e-14, Organism=Drosophila melanogaster, GI19921434, Length=88, Percent_Identity=39.7727272727273, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI17648013, Length=97, Percent_Identity=37.1134020618557, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24583090, Length=97, Percent_Identity=37.1134020618557, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24639068, Length=93, Percent_Identity=27.9569892473118, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 15995; Mature: 15995
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYESVSGEIKSTFSWLMLHQQRNQHARLIPVELYMSDKIIHLTDDSFDTDVLKADGAIL CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCEEEEEECCCCCCCEECCCCCEE VDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNG EEEHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECC EVAATKVGALSKGQLKEFLDANLA CEEEEECCCCCHHHHHHHHCCCCC >Mature Secondary Structure MLYESVSGEIKSTFSWLMLHQQRNQHARLIPVELYMSDKIIHLTDDSFDTDVLKADGAIL CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCEEEEEECCCCCCCEECCCCCEE VDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNG EEEHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECC EVAATKVGALSKGQLKEFLDANLA CEEEEECCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]