| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is ilvD [H]
Identifier: 91213293
GI number: 91213293
Start: 4214348
End: 4216198
Strand: Direct
Name: ilvD [H]
Synonym: UTI89_C4327
Alternate gene names: 91213293
Gene position: 4214348-4216198 (Clockwise)
Preceding gene: 91213292
Following gene: 91213294
Centisome position: 83.19
GC content: 56.24
Gene sequence:
>1851_bases ATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGTGGCGCGCCACCGGAAT GACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCACGTCCATCTAC GCGATCTCGGTAAACTGGTTGCCGAACAAATTGAAGCGGCTGGCGGCGTTGCCAAAGAGTTCAACACCATTGCGGTGGAT GATGGGATCGCTATGGGCCACGGGGGCATGCTTTATTCACTGCCATCTCGCGAACTGATCGCTGATTCCGTTGAATATAT GGTCAACGCCCACTGCGCCGACGCCATGGTCTGCATCTCTAACTGCGACAAAATCACCCCGGGGATGCTGATGGCTTCCC TGCGCCTGAATATTCCGGTGATCTTTGTTTCCGGCGGCCCGATGGAGGCCGGGAAAACCAAACTGTCCGATCAGATCATT AAGCTCGATCTGGTTGATGCGATGATCCAGGGCGCAGACCCGAAAGTTTCTGACTCCCAGAGCGATCAGGTTGAACGATC CGCCTGCCCAACCTGCGGTTCCTGCTCCGGGATGTTTACTGCTAACTCAATGAACTGCCTGACCGAAGCGCTGGGCCTGT CGCAGCCGGGCAACGGCTCGCTGCTGGCAACCCACGCTGATCGCAAGCAACTGTTCCTCAATGCTGGTAAACGCATTGTT GAATTGACCAAACGTTACTACGAACAGGATGATGAAAGCGCACTGCCGCGTAACATCGCCAGTAAGGCGGCGTTTGAAAA CGCCATGACGCTGGATATCGCGATGGGCGGCTCTACCAACACCGTTCTCCACCTGCTGGCGGCGGCGCAGGAAGCGGAAA TCGACTTCACCATGAGTGATATCGATAAGCTCTCCCGCAAAGTACCGCAGCTGTGTAAAGTTGCGCCGAGCACCCAAAAA TACCATATGGAAGATGTTCACCGTGCTGGTGGTGTTATCGGTATTCTCGGCGAGCTGGATCGTGCGGGGTTACTGAACCG TGATGTGAAAAATGTACTTGGCCTGACGTTGCCGCAAACGCTGGAACAATACGACATCATCGTGACCCAGGATGATGCGG TAAAAAATATGTTCCGCGCTGGCCCGGCGGGCATTCGTACTACACAGGCATTCTCGCAGGATTGCCGCTGGGATACGCTG GACGACGATCGCTCCAATGGCTGTATCCGCTCGCTGGAACACGCCTACAGCAAAGACGGCGGCCTGGCGGTGCTCTACGG TAATTTCGCAGAAAACGGCTGCATCGTTAAAACCGCAGGCGTCGATGACAGCATCCTCAAATTCACTGGCCCGGCGAAAG TCTACGAAAGCCAGGACGACGCGGTAGAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTAT GAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGTTTCCTGAAATCAATGGGTCTCGGTAAAGC CTGTGCGCTGATCACCGACGGTCGTTTCTCTGGCGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAA GTGGCGGCAGCATTGGCCTGATTGAAGATGGTGACCTGATCGCTATCGACATTCCGAACCGTGGCATTCAGTTACAGGTA AGCGATGCCGAACTGGCGGCGCGTCGTGAAGCGCAGGAAGCTCGGGGTGACAAAGCCTGGACGCCGAAAAACCGTGAACG TCAGGTTTCCTTTGCGCTGCGTGCCTACGCCAGCCTGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAAC TGGGGGGTTAA
Upstream 100 bases:
>100_bases GATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAG ACACTGGGAGTAAATAAAGT
Downstream 100 bases:
>100_bases TGATGGCAGACTCACAACCCCTGTCCGGTGCCCCTGAAGGTGCCGAATATTTAAGAGCGGTGCTGCGCGCGCCGGTCTAC GAAGCGGCGCAGGTCACGCC
Product: dihydroxy-acid dehydratase
Products: NA
Alternate protein names: DAD [H]
Number of amino acids: Translated: 616; Mature: 615
Protein sequence:
>616_residues MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVD DGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQII KLDLVDAMIQGADPKVSDSQSDQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGNGSLLATHADRKQLFLNAGKRIV ELTKRYYEQDDESALPRNIASKAAFENAMTLDIAMGGSTNTVLHLLAAAQEAEIDFTMSDIDKLSRKVPQLCKVAPSTQK YHMEDVHRAGGVIGILGELDRAGLLNRDVKNVLGLTLPQTLEQYDIIVTQDDAVKNMFRAGPAGIRTTQAFSQDCRWDTL DDDRSNGCIRSLEHAYSKDGGLAVLYGNFAENGCIVKTAGVDDSILKFTGPAKVYESQDDAVEAILGGKVVAGDVVVIRY EGPKGGPGMQEMLYPTSFLKSMGLGKACALITDGRFSGGTSGLSIGHVSPEAASGGSIGLIEDGDLIAIDIPNRGIQLQV SDAELAARREAQEARGDKAWTPKNRERQVSFALRAYASLATSADKGAVRDKSKLGG
Sequences:
>Translated_616_residues MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVD DGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQII KLDLVDAMIQGADPKVSDSQSDQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGNGSLLATHADRKQLFLNAGKRIV ELTKRYYEQDDESALPRNIASKAAFENAMTLDIAMGGSTNTVLHLLAAAQEAEIDFTMSDIDKLSRKVPQLCKVAPSTQK YHMEDVHRAGGVIGILGELDRAGLLNRDVKNVLGLTLPQTLEQYDIIVTQDDAVKNMFRAGPAGIRTTQAFSQDCRWDTL DDDRSNGCIRSLEHAYSKDGGLAVLYGNFAENGCIVKTAGVDDSILKFTGPAKVYESQDDAVEAILGGKVVAGDVVVIRY EGPKGGPGMQEMLYPTSFLKSMGLGKACALITDGRFSGGTSGLSIGHVSPEAASGGSIGLIEDGDLIAIDIPNRGIQLQV SDAELAARREAQEARGDKAWTPKNRERQVSFALRAYASLATSADKGAVRDKSKLGG >Mature_615_residues PKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVDD GIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQIIK LDLVDAMIQGADPKVSDSQSDQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGNGSLLATHADRKQLFLNAGKRIVE LTKRYYEQDDESALPRNIASKAAFENAMTLDIAMGGSTNTVLHLLAAAQEAEIDFTMSDIDKLSRKVPQLCKVAPSTQKY HMEDVHRAGGVIGILGELDRAGLLNRDVKNVLGLTLPQTLEQYDIIVTQDDAVKNMFRAGPAGIRTTQAFSQDCRWDTLD DDRSNGCIRSLEHAYSKDGGLAVLYGNFAENGCIVKTAGVDDSILKFTGPAKVYESQDDAVEAILGGKVVAGDVVVIRYE GPKGGPGMQEMLYPTSFLKSMGLGKACALITDGRFSGGTSGLSIGHVSPEAASGGSIGLIEDGDLIAIDIPNRGIQLQVS DAELAARREAQEARGDKAWTPKNRERQVSFALRAYASLATSADKGAVRDKSKLGG
Specific function: Valine and isoleucine biosynthesis; fourth step. [C]
COG id: COG0129
COG function: function code EG; Dihydroxyacid dehydratase/phosphogluconate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ilvD/edd family [H]
Homologues:
Organism=Escherichia coli, GI48994964, Length=616, Percent_Identity=99.025974025974, Blast_Score=1261, Evalue=0.0, Organism=Escherichia coli, GI2367371, Length=570, Percent_Identity=30.1754385964912, Blast_Score=187, Evalue=2e-48, Organism=Escherichia coli, GI1788157, Length=539, Percent_Identity=29.4990723562152, Blast_Score=185, Evalue=9e-48, Organism=Escherichia coli, GI1786464, Length=523, Percent_Identity=30.4015296367113, Blast_Score=176, Evalue=5e-45, Organism=Saccharomyces cerevisiae, GI6322476, Length=615, Percent_Identity=37.3983739837398, Blast_Score=343, Evalue=6e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015928 - InterPro: IPR004404 - InterPro: IPR000581 - InterPro: IPR020558 [H]
Pfam domain/function: PF00920 ILVD_EDD [H]
EC number: =4.2.1.9 [H]
Molecular weight: Translated: 65545; Mature: 65414
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS00886 ILVD_EDD_1 ; PS00887 ILVD_EDD_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLV CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHH AEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAMVCIS HHHHHHHCCHHHHCCEEEECCCEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH NCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQIIKLDLVDAMIQGADPKVSDSQ CCCCCCHHHHHHHEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC SDQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGNGSLLATHADRKQLFLNAGKRIV HHHHHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHH ELTKRYYEQDDESALPRNIASKAAFENAMTLDIAMGGSTNTVLHLLAAAQEAEIDFTMSD HHHHHHHCCCCCHHCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEHHH IDKLSRKVPQLCKVAPSTQKYHMEDVHRAGGVIGILGELDRAGLLNRDVKNVLGLTLPQT HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHH LEQYDIIVTQDDAVKNMFRAGPAGIRTTQAFSQDCRWDTLDDDRSNGCIRSLEHAYSKDG HHHCEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC GLAVLYGNFAENGCIVKTAGVDDSILKFTGPAKVYESQDDAVEAILGGKVVAGDVVVIRY CEEEEECCCCCCCCEEEECCCCCCHHEECCCHHHHCCCHHHHHHHHCCEEEECCEEEEEE EGPKGGPGMQEMLYPTSFLKSMGLGKACALITDGRFSGGTSGLSIGHVSPEAASGGSIGL CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEE IEDGDLIAIDIPNRGIQLQVSDAELAARREAQEARGDKAWTPKNRERQVSFALRAYASLA EECCCEEEEECCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH TSADKGAVRDKSKLGG CCCCCCCCCCHHHCCC >Mature Secondary Structure PKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLV CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHH AEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAMVCIS HHHHHHHCCHHHHCCEEEECCCEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH NCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQIIKLDLVDAMIQGADPKVSDSQ CCCCCCHHHHHHHEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC SDQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGNGSLLATHADRKQLFLNAGKRIV HHHHHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHH ELTKRYYEQDDESALPRNIASKAAFENAMTLDIAMGGSTNTVLHLLAAAQEAEIDFTMSD HHHHHHHCCCCCHHCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEHHH IDKLSRKVPQLCKVAPSTQKYHMEDVHRAGGVIGILGELDRAGLLNRDVKNVLGLTLPQT HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHH LEQYDIIVTQDDAVKNMFRAGPAGIRTTQAFSQDCRWDTLDDDRSNGCIRSLEHAYSKDG HHHCEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC GLAVLYGNFAENGCIVKTAGVDDSILKFTGPAKVYESQDDAVEAILGGKVVAGDVVVIRY CEEEEECCCCCCCCEEEECCCCCCHHEECCCHHHHCCCHHHHHHHHCCEEEECCEEEEEE EGPKGGPGMQEMLYPTSFLKSMGLGKACALITDGRFSGGTSGLSIGHVSPEAASGGSIGL CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEE IEDGDLIAIDIPNRGIQLQVSDAELAARREAQEARGDKAWTPKNRERQVSFALRAYASLA EECCCEEEEECCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH TSADKGAVRDKSKLGG CCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA