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The map label for this gene is sorA [H]

Identifier: 91212946

GI number: 91212946

Start: 3862745

End: 3863491

Strand: Direct

Name: sorA [H]

Synonym: UTI89_C3972

Alternate gene names: 91212946

Gene position: 3862745-3863491 (Clockwise)

Preceding gene: 91212945

Following gene: 91212947

Centisome position: 76.25

GC content: 43.64

Gene sequence:

>747_bases
ATGTCTATTTTTACAGCAGCAATGATTGCCCTGGTATATTGGATATCCCAAGCAAAAGTATGGTACGGCTTTTCTATTAT
GCGTATGCCATTATCGATAGCACCTATTATGGGACTCATCTTTAATGATATGCCAACTGCTTTATCTGTTGGGGCCACCT
TACAGATGATCTATATCGGGAGTATTGCCCCGGGAGGAAATCCTCCTGCAGATGAAGGTCTAGCCTCGTGTATAGCAATT
CCAATTGCACTTACCGCAGGTATTAAACCAGAAATTGCTATCTCTTTGGCTATTCCACTGGGATTGCTCGGCGTTGTTCT
GGAAAACGTACGTAAAACACTGAATACCACATTTATCCACATGGCTGATCGCTACGCAGAAAAAGGTGATATAAAAGGCA
TCCAACGCGCAGCCACAATATATCCTCTCCTGTTAGCCTTTCCGATGCGTTTTGTACCGGTATTCATCGCCTGCCTGTAT
GGCCCGGATGCCATTGCCTCTTTTGTAAACCTGCTTCCCGCCTGGTCGACGAATGGCCTGGCAATTGCCGGTAATATTCT
GCCTGCACTCGGTTTTGCGATAACCATAATTGTTATCGGTAAGAAACAATACATCCCTCTGTTCATTATTGGCTTTTTCC
TCGTGACCTATTCAGGCTTGAATACCATTGGCATCTCTATTTTTGGACTCTGTGCCGTCCTCTTATATATGCAGTCACAA
AATACAAAAGGAACTAAAAATGGATAA

Upstream 100 bases:

>100_bases
GATAAGAATATCAAAGTTTATTTCCAAACTATTCCTGAAGAAGATCCTGCCAGCCTACAAAAAATCAAAAATAAGTTACC
TTAATTAAGGAGAGGAGCTT

Downstream 100 bases:

>100_bases
TATAATTGAGTCAGGATACTCAGAATCCTCCCCTATTACGAAAAGAGACGTTCAGATTGTTTGGCTAAAATGGCACGCGT
TCTCTGAAACATCATTGAAC

Product: putative phosphotransferase system protein

Products: NA

Alternate protein names: EIIC-Sor; PTS system sorbose-specific EIIC component [H]

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSIFTAAMIALVYWISQAKVWYGFSIMRMPLSIAPIMGLIFNDMPTALSVGATLQMIYIGSIAPGGNPPADEGLASCIAI
PIALTAGIKPEIAISLAIPLGLLGVVLENVRKTLNTTFIHMADRYAEKGDIKGIQRAATIYPLLLAFPMRFVPVFIACLY
GPDAIASFVNLLPAWSTNGLAIAGNILPALGFAITIIVIGKKQYIPLFIIGFFLVTYSGLNTIGISIFGLCAVLLYMQSQ
NTKGTKNG

Sequences:

>Translated_248_residues
MSIFTAAMIALVYWISQAKVWYGFSIMRMPLSIAPIMGLIFNDMPTALSVGATLQMIYIGSIAPGGNPPADEGLASCIAI
PIALTAGIKPEIAISLAIPLGLLGVVLENVRKTLNTTFIHMADRYAEKGDIKGIQRAATIYPLLLAFPMRFVPVFIACLY
GPDAIASFVNLLPAWSTNGLAIAGNILPALGFAITIIVIGKKQYIPLFIIGFFLVTYSGLNTIGISIFGLCAVLLYMQSQ
NTKGTKNG
>Mature_247_residues
SIFTAAMIALVYWISQAKVWYGFSIMRMPLSIAPIMGLIFNDMPTALSVGATLQMIYIGSIAPGGNPPADEGLASCIAIP
IALTAGIKPEIAISLAIPLGLLGVVLENVRKTLNTTFIHMADRYAEKGDIKGIQRAATIYPLLLAFPMRFVPVFIACLYG
PDAIASFVNLLPAWSTNGLAIAGNILPALGFAITIIVIGKKQYIPLFIIGFFLVTYSGLNTIGISIFGLCAVLLYMQSQN
TKGTKNG

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3715

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1789528, Length=197, Percent_Identity=29.4416243654822, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788121, Length=215, Percent_Identity=29.3023255813954, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004700
- InterPro:   IPR018404 [H]

Pfam domain/function: PF03609 EII-Sor [H]

EC number: NA

Molecular weight: Translated: 26447; Mature: 26316

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS51106 PTS_EIIC_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFTAAMIALVYWISQAKVWYGFSIMRMPLSIAPIMGLIFNDMPTALSVGATLQMIYIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCEEEEEEEE
SIAPGGNPPADEGLASCIAIPIALTAGIKPEIAISLAIPLGLLGVVLENVRKTLNTTFIH
EECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
MADRYAEKGDIKGIQRAATIYPLLLAFPMRFVPVFIACLYGPDAIASFVNLLPAWSTNGL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCE
AIAGNILPALGFAITIIVIGKKQYIPLFIIGFFLVTYSGLNTIGISIFGLCAVLLYMQSQ
EEEHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
NTKGTKNG
CCCCCCCC
>Mature Secondary Structure 
SIFTAAMIALVYWISQAKVWYGFSIMRMPLSIAPIMGLIFNDMPTALSVGATLQMIYIG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCEEEEEEEE
SIAPGGNPPADEGLASCIAIPIALTAGIKPEIAISLAIPLGLLGVVLENVRKTLNTTFIH
EECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
MADRYAEKGDIKGIQRAATIYPLLLAFPMRFVPVFIACLYGPDAIASFVNLLPAWSTNGL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCE
AIAGNILPALGFAITIIVIGKKQYIPLFIIGFFLVTYSGLNTIGISIFGLCAVLLYMQSQ
EEEHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
NTKGTKNG
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7947968 [H]