| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yheS [H]
Identifier: 91212829
GI number: 91212829
Start: 3739294
End: 3741207
Strand: Direct
Name: yheS [H]
Synonym: UTI89_C3855
Alternate gene names: 91212829
Gene position: 3739294-3741207 (Clockwise)
Preceding gene: 91212824
Following gene: 91212830
Centisome position: 73.82
GC content: 55.49
Gene sequence:
>1914_bases ATGATTGTTTTTTCCTCGTTACAAATTCGTCGCGGCGTGCGCATCCTGCTGGATAATGCCACCGCCACCATCAACCCTGG GCAGAAAGTCGGCCTGGTGGGTAAAAACGGCTGTGGTAAATCTACTCTGCTGGCATTGCTGAAAAATGAAATCAGCGCCG ACGGCGGCAGCTACACCTTTCCGGTAAGCTGGCAACTGGCGTGGGTGAATCAGGAAACACCGGCGTTACCGCAAGCGGCG CTGGAATATGTCATTGACGGCGACCGTGAATATCGTCAACTGGAAGCGCAGCTACACGACGCCAACGAACGTAACGACGG GCACGCCATTGCGACCATTCATGGCAAGCTGGATGCTATTGACGCATGGAGTATTCGCTCCCGTGCCGCCAGCCTGCTGC ACGGCCTCGGTTTCAGCAATGAACAACTGGAGCGCCCGGTAAGTGATTTCTCCGGTGGCTGGCGTATGCGTCTTAACCTT GCCCAGGCGCTGATTTGCCGTTCAGACTTGCTGCTGCTCGACGAACCGACTAACCACCTCGATCTCGATGCCGTTATCTG GCTGGAAAAATGGCTGAAGAGCTATCAGGGCACGCTGATCCTGATCTCTCACGATCGCGATTTCCTCGATCCGATCGTTG ATAAAATTATTCATATCGAACAACAAAGCATGTTCGAGTACACCGGCAACTACAGTTCGTTTGAAGTACAGCGCGCCACC CGTCTGGCGCAGCAACAAGCGATGTATGAAAGCCAGCAGGAACGCGTAGCGCATCTGCAAAGTTATATCGACCGTTTCCG TGCCAAAGCCACCAAAGCGAAGCAGGCCCAGAGCCGCATTAAGATGCTTGAGCGTATGGAGCTGATTGCCCCCGCGCACG TCGACAACCCGTTCCGCTTTAGCTTCCGCGCGCCGGAAAGCCTGCCAAATCCGTTACTGAAGATGGCAAAAGTCAGCGCA GGCTATGGCGATCGCATTATTCTCGACTCGATTAAACTGAATCTGGTCCCCGGCTCGCGCATTGGTCTGCTAGGCCGCAA CGGCGCGGGTAAATCGACATTAATCAAACTGTTAGCCGGCGAACTTGCGCCAGTCAGCGGTGAAATTGGTCTGGCGAAAG GGATCAAGCTCGGCTACTTCGCCCAGCATCAACTGGAATACCTGCGCGCCGACGAATCGCCTATTCAACATCTGGCACGT TTAGCGCCGCAGGAGCTGGAGCAAAAACTGCGTGACTACCTCGGCGGCTTTGGTTTCCAGGGCGATAAAGTAACCGAAGA AACGCGCCGCTTCTCCGGTGGGGAAAAAGCCCGCCTGGTGCTGGCATTAATTGTCTGGCAGCGTCCGAATCTGCTGCTGC TCGACGAACCGACCAACCACCTTGACCTCGACATGCGTCAGGCACTCACCGAAGCATTAATCGAGTTCGAAGGCGCGCTG GTTGTCGTCTCGCACGACCGTCATTTGCTGCGTTCCACCACTGACGATCTCTACCTGGTTCACGATCGTAAAGTCGAACC GTTCGACGGCGATCTGGAAGATTATCAACAGTGGTTGAGCGACGTACAAAAGCAGGAAAACCAGACCGACGAAGCGCCAA AAGAGAACGCGAACAGCGCCCAGGCACGTAAAGATCAGAAGCGTCGGGAAGCGGAGCTGCGTGCGCAAACCCAGCCACTG CGTAAAGAGATTGCCCGTCTGGAAAAAGAGATGGAGAAGCTGAACGCGCAACTGGCGCAGGCGGAAGAGAAACTCGGCGA CAGCGAACTGTACGATCAAAGCCGTAAAGCGGAGTTGACCGCCTGCCTGCAACAGCAAGCCAGCGCCAAATCCGGCCTGG AAGAGTGCGAAATGGCATGGCTGGAAGCCCAGGAGCAGCTTGAGCAGATGCTGCTGGAAGGCCAAAGCAACTGA
Upstream 100 bases:
>100_bases AGTCGCTGTTTTGGGCTACCATTGCGCCCGGTGCGGCAGCTCGCCCATACATTACATTATCATAATGATAAGTTAACATA GTCTGAACATACGGCGCCTT
Downstream 100 bases:
>100_bases TGGCGCAGATAACAACGACCGATGCCAATGAATTTAGCAGCAGTGCTAAATTCACCCCTATGCGCGGCTTTAGCAATTGT CATCTACAAACCATGCTGCC
Product: putative ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 637; Mature: 637
Protein sequence:
>637_residues MIVFSSLQIRRGVRILLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPVSWQLAWVNQETPALPQAA LEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNL AQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSMFEYTGNYSSFEVQRAT RLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERMELIAPAHVDNPFRFSFRAPESLPNPLLKMAKVSA GYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADESPIQHLAR LAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIEFEGAL VVVSHDRHLLRSTTDDLYLVHDRKVEPFDGDLEDYQQWLSDVQKQENQTDEAPKENANSAQARKDQKRREAELRAQTQPL RKEIARLEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACLQQQASAKSGLEECEMAWLEAQEQLEQMLLEGQSN
Sequences:
>Translated_637_residues MIVFSSLQIRRGVRILLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPVSWQLAWVNQETPALPQAA LEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNL AQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSMFEYTGNYSSFEVQRAT RLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERMELIAPAHVDNPFRFSFRAPESLPNPLLKMAKVSA GYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADESPIQHLAR LAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIEFEGAL VVVSHDRHLLRSTTDDLYLVHDRKVEPFDGDLEDYQQWLSDVQKQENQTDEAPKENANSAQARKDQKRREAELRAQTQPL RKEIARLEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACLQQQASAKSGLEECEMAWLEAQEQLEQMLLEGQSN >Mature_637_residues MIVFSSLQIRRGVRILLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPVSWQLAWVNQETPALPQAA LEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNL AQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSMFEYTGNYSSFEVQRAT RLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERMELIAPAHVDNPFRFSFRAPESLPNPLLKMAKVSA GYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADESPIQHLAR LAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIEFEGAL VVVSHDRHLLRSTTDDLYLVHDRKVEPFDGDLEDYQQWLSDVQKQENQTDEAPKENANSAQARKDQKRREAELRAQTQPL RKEIARLEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACLQQQASAKSGLEECEMAWLEAQEQLEQMLLEGQSN
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=537, Percent_Identity=37.4301675977654, Blast_Score=355, Evalue=7e-98, Organism=Homo sapiens, GI10947137, Length=513, Percent_Identity=36.2573099415205, Blast_Score=317, Evalue=2e-86, Organism=Homo sapiens, GI27881506, Length=513, Percent_Identity=36.2573099415205, Blast_Score=317, Evalue=2e-86, Organism=Homo sapiens, GI10947135, Length=525, Percent_Identity=35.4285714285714, Blast_Score=273, Evalue=4e-73, Organism=Homo sapiens, GI69354671, Length=525, Percent_Identity=35.4285714285714, Blast_Score=272, Evalue=6e-73, Organism=Homo sapiens, GI21536376, Length=185, Percent_Identity=28.6486486486486, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1789751, Length=637, Percent_Identity=99.5290423861852, Blast_Score=1296, Evalue=0.0, Organism=Escherichia coli, GI1787041, Length=529, Percent_Identity=32.8922495274102, Blast_Score=295, Evalue=5e-81, Organism=Escherichia coli, GI2367384, Length=532, Percent_Identity=31.390977443609, Blast_Score=232, Evalue=4e-62, Organism=Escherichia coli, GI1787182, Length=623, Percent_Identity=28.2504012841091, Blast_Score=228, Evalue=6e-61, Organism=Escherichia coli, GI1788165, Length=190, Percent_Identity=32.6315789473684, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI87081782, Length=527, Percent_Identity=25.6166982922201, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI87081791, Length=204, Percent_Identity=28.4313725490196, Blast_Score=73, Evalue=6e-14, Organism=Escherichia coli, GI1787164, Length=216, Percent_Identity=28.7037037037037, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI48994997, Length=221, Percent_Identity=25.7918552036199, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI87081709, Length=209, Percent_Identity=23.9234449760766, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI1789891, Length=190, Percent_Identity=27.3684210526316, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI48994883, Length=219, Percent_Identity=26.9406392694064, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1787500, Length=215, Percent_Identity=27.906976744186, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1789586, Length=218, Percent_Identity=27.9816513761468, Blast_Score=63, Evalue=7e-11, Organism=Escherichia coli, GI1787758, Length=205, Percent_Identity=23.9024390243902, Blast_Score=62, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17553372, Length=530, Percent_Identity=38.3018867924528, Blast_Score=352, Evalue=3e-97, Organism=Caenorhabditis elegans, GI17555318, Length=524, Percent_Identity=35.1145038167939, Blast_Score=322, Evalue=5e-88, Organism=Caenorhabditis elegans, GI17559834, Length=547, Percent_Identity=34.1864716636197, Blast_Score=309, Evalue=2e-84, Organism=Caenorhabditis elegans, GI71996809, Length=204, Percent_Identity=32.3529411764706, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193211015, Length=184, Percent_Identity=33.1521739130435, Blast_Score=69, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193211017, Length=184, Percent_Identity=33.1521739130435, Blast_Score=69, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=542, Percent_Identity=35.0553505535055, Blast_Score=333, Evalue=3e-92, Organism=Saccharomyces cerevisiae, GI6320874, Length=534, Percent_Identity=35.0187265917603, Blast_Score=321, Evalue=2e-88, Organism=Saccharomyces cerevisiae, GI6325030, Length=442, Percent_Identity=29.4117647058824, Blast_Score=161, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6324314, Length=391, Percent_Identity=28.6445012787724, Blast_Score=152, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6323278, Length=391, Percent_Identity=28.9002557544757, Blast_Score=150, Evalue=8e-37, Organism=Drosophila melanogaster, GI24666836, Length=520, Percent_Identity=37.3076923076923, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI24642252, Length=523, Percent_Identity=37.4760994263862, Blast_Score=350, Evalue=2e-96, Organism=Drosophila melanogaster, GI18859989, Length=523, Percent_Identity=37.4760994263862, Blast_Score=350, Evalue=2e-96, Organism=Drosophila melanogaster, GI24641342, Length=532, Percent_Identity=35.3383458646617, Blast_Score=311, Evalue=1e-84, Organism=Drosophila melanogaster, GI116007184, Length=164, Percent_Identity=30.4878048780488, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI221500365, Length=164, Percent_Identity=30.4878048780488, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI24661270, Length=191, Percent_Identity=28.7958115183246, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI21355589, Length=191, Percent_Identity=28.7958115183246, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 71842; Mature: 71842
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVFSSLQIRRGVRILLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTF CEEECCHHHHCCCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEE PVSWQLAWVNQETPALPQAALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAI EEEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC DAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHL CHHHHHHHHHHHHHHCCCCHHHHHCCHHHCCCCEEEEHHHHHHHHHHCCEEEEECCCCCC DLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSMFEYTGNYSSFEVQRAT CHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH RLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERMELIAPAHVDNPFRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE SFRAPESLPNPLLKMAKVSAGYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAG EECCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH ELAPVSGEIGLAKGIKLGYFAQHQLEYLRADESPIQHLARLAPQELEQKLRDYLGGFGFQ HCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCC GDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIEFEGAL CCCHHHHHHHCCCCCHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEE VVVSHDRHLLRSTTDDLYLVHDRKVEPFDGDLEDYQQWLSDVQKQENQTDEAPKENANSA EEEECCCHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHH QARKDQKRREAELRAQTQPLRKEIARLEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ACLQQQASAKSGLEECEMAWLEAQEQLEQMLLEGQSN HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIVFSSLQIRRGVRILLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTF CEEECCHHHHCCCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEE PVSWQLAWVNQETPALPQAALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAI EEEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC DAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHL CHHHHHHHHHHHHHHCCCCHHHHHCCHHHCCCCEEEEHHHHHHHHHHCCEEEEECCCCCC DLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSMFEYTGNYSSFEVQRAT CHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH RLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERMELIAPAHVDNPFRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE SFRAPESLPNPLLKMAKVSAGYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAG EECCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH ELAPVSGEIGLAKGIKLGYFAQHQLEYLRADESPIQHLARLAPQELEQKLRDYLGGFGFQ HCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCC GDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIEFEGAL CCCHHHHHHHCCCCCHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEE VVVSHDRHLLRSTTDDLYLVHDRKVEPFDGDLEDYQQWLSDVQKQENQTDEAPKENANSA EEEECCCHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHH QARKDQKRREAELRAQTQPLRKEIARLEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ACLQQQASAKSGLEECEMAWLEAQEQLEQMLLEGQSN HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]