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The map label for this gene is yhdY [H]

Identifier: 91212701

GI number: 91212701

Start: 3639281

End: 3640387

Strand: Direct

Name: yhdY [H]

Synonym: UTI89_C3712

Alternate gene names: 91212701

Gene position: 3639281-3640387 (Clockwise)

Preceding gene: 91212700

Following gene: 91212702

Centisome position: 71.84

GC content: 51.4

Gene sequence:

>1107_bases
ATGATGACAAAAGTATTGCTGTCTCATCCCCCGCGCCTGGCGAGCCATAACTCAAGCCGCGCGATGGTGTGGGTGCGAAA
AAATCTGTTCTCCAGCTGGAGCAATAGCCTGCTGACTATTGGCTGCATATGGTTGATGTGGGAACTGATCCCACCGTTGC
TGAACTGGGTATTTTTGCAGGCTAACTGGGTTGGCTCAACGCGTGCCGACTGCACAAAATCCGGTGCCTGTTGGGTCTTC
ATCCACGAACGATTTGGTCAGTTTATGTATGGACTTTACCCACACGACCAACGCTGGCGAATTAACCTGGCATTACTGAT
TGGCCTTGTTTCTATCGCACCAATGTTCTGGAAAATACTTCCGCATCGCAGTCGCTATATTGCGGTCTGGGCGGTGATTT
ACCCACTGGTTGTCTGGTGGCTGATGTATGGTGGGTTTCTTGGTCTTGATCGGGTTGAAACCCGGCAATGGGGCGGGTTG
ACGCTAACTTTAATTATTGCATCAGTTGGGATTGCGGGGGCGCTACCGTGGGGGATCTTACTGGCGTTAGGTCGCCGCTC
CCATATGCCGATTGTGCGTATCTTATCGGTCATTTTTATCGAGTTCTGGCGCGGCGTACCGCTGATTACCGTATTGTTTA
TGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAACTGATCCGCGCGCTGGTTGGCGTGATC
CTATTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGCGGATTGCAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGA
GTCGCTGGCATTGGGTTACTGGAAAACTCAGGGGCTGGTTATTCTGCCACAGGCGTTGAAGCTGGTAATTCCTGGGCTGG
TAAATACCATCATCGCACTCTTCAAAGATACCAGTCTGGTGATCATCATCGGGTTGTTCGATCTTTTCAGTAGCGTTCAG
CAGGCAACCGTTGATCCCGCCTGGTTGGGTATGTCGACGGAAGGGTATGTTTTCGCCGCGCTGATCTACTGGATCTTCTG
TTTCAGCATGTCACGTTATAGCCAACATCTGGAAAAACGTTTTAACACCGGGCGTACACCGCATTGA

Upstream 100 bases:

>100_bases
AGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGCATCGCGA
TCGTTGAACGCTAAGGAGTC

Downstream 100 bases:

>100_bases
GGACACTATGAGCCAAATTTTACTGCAACCTGCTAACGCGATGATTACGCTGGAAAACGTCAATAAATGGTATGGACAAT
TCCATGTTTTGAAAAATATA

Product: putative transport system permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MMTKVLLSHPPRLASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWLMWELIPPLLNWVFLQANWVGSTRADCTKSGACWVF
IHERFGQFMYGLYPHDQRWRINLALLIGLVSIAPMFWKILPHRSRYIAVWAVIYPLVVWWLMYGGFLGLDRVETRQWGGL
TLTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVMLPLFMAEGTSIDKLIRALVGVI
LFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQ
QATVDPAWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGRTPH

Sequences:

>Translated_368_residues
MMTKVLLSHPPRLASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWLMWELIPPLLNWVFLQANWVGSTRADCTKSGACWVF
IHERFGQFMYGLYPHDQRWRINLALLIGLVSIAPMFWKILPHRSRYIAVWAVIYPLVVWWLMYGGFLGLDRVETRQWGGL
TLTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVMLPLFMAEGTSIDKLIRALVGVI
LFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQ
QATVDPAWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGRTPH
>Mature_368_residues
MMTKVLLSHPPRLASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWLMWELIPPLLNWVFLQANWVGSTRADCTKSGACWVF
IHERFGQFMYGLYPHDQRWRINLALLIGLVSIAPMFWKILPHRSRYIAVWAVIYPLVVWWLMYGGFLGLDRVETRQWGGL
TLTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVMLPLFMAEGTSIDKLIRALVGVI
LFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQ
QATVDPAWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGRTPH

Specific function: Probably part of the binding-protein-dependent transport system ydhWXYZ for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87082239, Length=367, Percent_Identity=97.275204359673, Blast_Score=722, Evalue=0.0,
Organism=Escherichia coli, GI1788226, Length=212, Percent_Identity=38.6792452830189, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1786873, Length=207, Percent_Identity=31.4009661835749, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1787030, Length=204, Percent_Identity=32.3529411764706, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1788645, Length=212, Percent_Identity=27.8301886792453, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI48994930, Length=120, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786874, Length=131, Percent_Identity=28.2442748091603, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787087, Length=184, Percent_Identity=29.3478260869565, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 41632; Mature: 41632

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTKVLLSHPPRLASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWLMWELIPPLLNWVFLQ
CCCCHHHCCCCCCCCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHE
ANWVGSTRADCTKSGACWVFIHERFGQFMYGLYPHDQRWRINLALLIGLVSIAPMFWKIL
ECCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHC
PHRSRYIAVWAVIYPLVVWWLMYGGFLGLDRVETRQWGGLTLTLIIASVGIAGALPWGIL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVMLPLFMAEGTSIDKLIRALVGVI
HHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIAL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCEEEEHHHHHHHHHHHHHHHHHH
FKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKR
HCCCCCEEHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FNTGRTPH
HCCCCCCC
>Mature Secondary Structure
MMTKVLLSHPPRLASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWLMWELIPPLLNWVFLQ
CCCCHHHCCCCCCCCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHE
ANWVGSTRADCTKSGACWVFIHERFGQFMYGLYPHDQRWRINLALLIGLVSIAPMFWKIL
ECCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHC
PHRSRYIAVWAVIYPLVVWWLMYGGFLGLDRVETRQWGGLTLTLIIASVGIAGALPWGIL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVMLPLFMAEGTSIDKLIRALVGVI
HHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIAL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCEEEEHHHHHHHHHHHHHHHHHH
FKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKR
HCCCCCEEHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FNTGRTPH
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]