| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is 91212203
Identifier: 91212203
GI number: 91212203
Start: 3130612
End: 3131040
Strand: Direct
Name: 91212203
Synonym: UTI89_C3209
Alternate gene names: NA
Gene position: 3130612-3131040 (Clockwise)
Preceding gene: 91212202
Following gene: 91212204
Centisome position: 61.8
GC content: 53.61
Gene sequence:
>429_bases ATGTCGACACCTTCCTTATATGAAATGCTGACGTTCAGTTTCAGCGGCGAGTTACCGCTGGAACAGATCAGCGAGCGGGA TCAGCTTATCCTTTCCGTGATGGACAATATGCAACGCATTATCAACTGCCGGGCAGGCACGCTGGCGCATTTGCCGGATT ACGGTCTGCCGGATCTCAGTCTGATCCATCAGGGGATGGCTGCGGGTATTCATGGCCTGATGCGTCAGATTGAAGAAACA CTGCTGCGTTATGAACCACGCCTGAGTCAGATACAGGTGGAATTACTCCCCCAGCCCCGTCCGGGGCATCTTAATTACCT GATCCACGCGCAGCTTCCCGATACCGGCTGGATACGCTTTGATGGCGTATTTTCTCCGGAAGGACGAATTGTTCTGCGTC ATCTCAAACAGCAGGAGCGGGCGTACTGA
Upstream 100 bases:
>100_bases TCTGGTGATCAAAAGGGACGAACTGGAGGCCGACAAGCCGCGCTCGATTGAACTGATGAGAAGCGACCTGCGACTGCTGC CTCTCAAGGATAAATAACCG
Downstream 100 bases:
>100_bases TGGCAAGTAACGCGAATTTTATCAGCCAGTTCGTCATGGGCGGCGATCCCTGTACGTATAAGGAATCCGGTGAACTGCAG GCTGAAATGAGTAAACTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: GPW/Gp25 Family Protein; Type VI Secretion System Lysozyme Protein; Type VI Secretion System Protein; Type VI Secretion System Lysozyme-Related Family Protein; Type VI Secretion System Lysozyme-Like Protein
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSTPSLYEMLTFSFSGELPLEQISERDQLILSVMDNMQRIINCRAGTLAHLPDYGLPDLSLIHQGMAAGIHGLMRQIEET LLRYEPRLSQIQVELLPQPRPGHLNYLIHAQLPDTGWIRFDGVFSPEGRIVLRHLKQQERAY
Sequences:
>Translated_142_residues MSTPSLYEMLTFSFSGELPLEQISERDQLILSVMDNMQRIINCRAGTLAHLPDYGLPDLSLIHQGMAAGIHGLMRQIEET LLRYEPRLSQIQVELLPQPRPGHLNYLIHAQLPDTGWIRFDGVFSPEGRIVLRHLKQQERAY >Mature_141_residues STPSLYEMLTFSFSGELPLEQISERDQLILSVMDNMQRIINCRAGTLAHLPDYGLPDLSLIHQGMAAGIHGLMRQIEETL LRYEPRLSQIQVELLPQPRPGHLNYLIHAQLPDTGWIRFDGVFSPEGRIVLRHLKQQERAY
Specific function: Unknown
COG id: COG3518
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16290; Mature: 16159
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPSLYEMLTFSFSGELPLEQISERDQLILSVMDNMQRIINCRAGTLAHLPDYGLPDLS CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH LIHQGMAAGIHGLMRQIEETLLRYEPRLSQIQVELLPQPRPGHLNYLIHAQLPDTGWIRF HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCEEEEEEEECCCCCCEEE DGVFSPEGRIVLRHLKQQERAY CCEECCCCHHHHHHHHHHHCCC >Mature Secondary Structure STPSLYEMLTFSFSGELPLEQISERDQLILSVMDNMQRIINCRAGTLAHLPDYGLPDLS CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH LIHQGMAAGIHGLMRQIEETLLRYEPRLSQIQVELLPQPRPGHLNYLIHAQLPDTGWIRF HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCEEEEEEEECCCCCCEEE DGVFSPEGRIVLRHLKQQERAY CCEECCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA