Definition Escherichia coli UTI89 chromosome, complete genome.
Accession NC_007946
Length 5,065,741

Click here to switch to the map view.

The map label for this gene is 91212203

Identifier: 91212203

GI number: 91212203

Start: 3130612

End: 3131040

Strand: Direct

Name: 91212203

Synonym: UTI89_C3209

Alternate gene names: NA

Gene position: 3130612-3131040 (Clockwise)

Preceding gene: 91212202

Following gene: 91212204

Centisome position: 61.8

GC content: 53.61

Gene sequence:

>429_bases
ATGTCGACACCTTCCTTATATGAAATGCTGACGTTCAGTTTCAGCGGCGAGTTACCGCTGGAACAGATCAGCGAGCGGGA
TCAGCTTATCCTTTCCGTGATGGACAATATGCAACGCATTATCAACTGCCGGGCAGGCACGCTGGCGCATTTGCCGGATT
ACGGTCTGCCGGATCTCAGTCTGATCCATCAGGGGATGGCTGCGGGTATTCATGGCCTGATGCGTCAGATTGAAGAAACA
CTGCTGCGTTATGAACCACGCCTGAGTCAGATACAGGTGGAATTACTCCCCCAGCCCCGTCCGGGGCATCTTAATTACCT
GATCCACGCGCAGCTTCCCGATACCGGCTGGATACGCTTTGATGGCGTATTTTCTCCGGAAGGACGAATTGTTCTGCGTC
ATCTCAAACAGCAGGAGCGGGCGTACTGA

Upstream 100 bases:

>100_bases
TCTGGTGATCAAAAGGGACGAACTGGAGGCCGACAAGCCGCGCTCGATTGAACTGATGAGAAGCGACCTGCGACTGCTGC
CTCTCAAGGATAAATAACCG

Downstream 100 bases:

>100_bases
TGGCAAGTAACGCGAATTTTATCAGCCAGTTCGTCATGGGCGGCGATCCCTGTACGTATAAGGAATCCGGTGAACTGCAG
GCTGAAATGAGTAAACTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: GPW/Gp25 Family Protein; Type VI Secretion System Lysozyme Protein; Type VI Secretion System Protein; Type VI Secretion System Lysozyme-Related Family Protein; Type VI Secretion System Lysozyme-Like Protein

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSTPSLYEMLTFSFSGELPLEQISERDQLILSVMDNMQRIINCRAGTLAHLPDYGLPDLSLIHQGMAAGIHGLMRQIEET
LLRYEPRLSQIQVELLPQPRPGHLNYLIHAQLPDTGWIRFDGVFSPEGRIVLRHLKQQERAY

Sequences:

>Translated_142_residues
MSTPSLYEMLTFSFSGELPLEQISERDQLILSVMDNMQRIINCRAGTLAHLPDYGLPDLSLIHQGMAAGIHGLMRQIEET
LLRYEPRLSQIQVELLPQPRPGHLNYLIHAQLPDTGWIRFDGVFSPEGRIVLRHLKQQERAY
>Mature_141_residues
STPSLYEMLTFSFSGELPLEQISERDQLILSVMDNMQRIINCRAGTLAHLPDYGLPDLSLIHQGMAAGIHGLMRQIEETL
LRYEPRLSQIQVELLPQPRPGHLNYLIHAQLPDTGWIRFDGVFSPEGRIVLRHLKQQERAY

Specific function: Unknown

COG id: COG3518

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16290; Mature: 16159

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPSLYEMLTFSFSGELPLEQISERDQLILSVMDNMQRIINCRAGTLAHLPDYGLPDLS
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
LIHQGMAAGIHGLMRQIEETLLRYEPRLSQIQVELLPQPRPGHLNYLIHAQLPDTGWIRF
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCEEEEEEEECCCCCCEEE
DGVFSPEGRIVLRHLKQQERAY
CCEECCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
STPSLYEMLTFSFSGELPLEQISERDQLILSVMDNMQRIINCRAGTLAHLPDYGLPDLS
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
LIHQGMAAGIHGLMRQIEETLLRYEPRLSQIQVELLPQPRPGHLNYLIHAQLPDTGWIRF
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCEEEEEEEECCCCCCEEE
DGVFSPEGRIVLRHLKQQERAY
CCEECCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA