Definition Escherichia coli UTI89 chromosome, complete genome.
Accession NC_007946
Length 5,065,741

Click here to switch to the map view.

The map label for this gene is 91212186

Identifier: 91212186

GI number: 91212186

Start: 3104777

End: 3106114

Strand: Direct

Name: 91212186

Synonym: UTI89_C3192

Alternate gene names: NA

Gene position: 3104777-3106114 (Clockwise)

Preceding gene: 91212185

Following gene: 91212187

Centisome position: 61.29

GC content: 59.42

Gene sequence:

>1338_bases
ATGAAAATTCATCGACCACTGTGGGCTGAGGGGACATTCCTGTCCTCTCAGCAGTTTCAGCAGCAGGCCCGCTGGGAAGC
GTTCAGCAATGACTGTATTGCGCAGCTTTGTATTCGCCATCCGTGGGGGATCGCAAACGTGCTCTTTGACCGGGATGCCC
TGACGCCCGGAAAGCTGAAAACGCAGGCAGTACGCCTGCGTTTTGCTGATGGCACGCTGATCGATTCAGACGTGAGTGAC
CTTCTGCCGCTCGCCTGCGATCTGCGCGCGCTGAAGAACGACAGCGCGATTGTTTTGCTGGCGCTGCCGCTTGCACATGG
TAACGGCGGTAATCTCGGTCAGGGTGAGCAGACTGAAAGACCGCTGCGCTATCGTCAGGAATGGCAAAAGGTGCAGGATA
TCTACGGCAGTGACAGTGAAGATATGGCCGTTGAGCGTCATGCGCTGTCCCTGCGCTTTGCTCATGATAACAATCAGGAT
TACATCACCTGCCCACTGGCGCGTCTGGTGCGGGATGTTCAGGGCAACTGGACACAGGATGAGAGCTATATTCCGCCGTT
ACTGGCGTTTAACGCCCATGACGGGCTGGTACAGCGTCTGGACACATTGCTGTTGCAGCTACGGGCGAAGTGCCAGCGTC
TGATGGCGATGCGCCGGGAAAGCAACCAGCGTATGGCGGACTTTGCCGTCGCCGATGTCTCCCTGTTCTGGCTGCTTAAC
GCGCTGAATTCCGCCGAGCCGGTGCTGAGCGATTTCCTGCGCTACCCGGCTGTCCACCCCGAACTGGTCTGGCGGGAGCT
GGCGAGGCTTGCCGGTGCGCTGCTGACGTTTTCCCTTGAGCATAACGTCAGCGCCGTTCCGCCCTATGTCCACGAATCGC
CGTCCACCGTCTTTCCGCCCCTGTTCTCCCTGCTCAGCGAGCTGCTGGAAGCCAGCCTGCCGTCGCGGGTGATCGCGCTG
GATCTGGCGTCCCTGCCGGGCAACCGCTGGAAAGCCGACCTGCACGATCCGCGACTGCGGGAAGAGGCCGATTTTTATCT
GTCCGTTCGTTCCTCACTGCCTGCGCATCAGGTACTGCATCAGCTACCGCTGGTCTGCAAAATCGGTGCGCCCGATGATG
TCACGCTGCTTATCAACGTGGCGCTGAACGGTGTTCAACTGGTGCCGCTTACCTCGGTTCCGGCGGCGCTGCCGCTGCGG
CTGGAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGAGCTGCATGATTTA
TGCGCCGGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCACATGA

Upstream 100 bases:

>100_bases
TCTTTGCCGTGCCGCATTTCCAGATTGAAGGGATGGATATCAACCTTTCTCTGGTTTCCCAGATGCCGAAAGCGAAAGCC
TGACCGGGCCGTGGTGTGAT

Downstream 100 bases:

>100_bases
AAAAAGATATGGATATCAATATCGATGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACC
GTGCGTCACGGTATCGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Type VI Secretion System Protein ImpJ; Type VI Secretion System Core Protein; T6ss M

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MKIHRPLWAEGTFLSSQQFQQQARWEAFSNDCIAQLCIRHPWGIANVLFDRDALTPGKLKTQAVRLRFADGTLIDSDVSD
LLPLACDLRALKNDSAIVLLALPLAHGNGGNLGQGEQTERPLRYRQEWQKVQDIYGSDSEDMAVERHALSLRFAHDNNQD
YITCPLARLVRDVQGNWTQDESYIPPLLAFNAHDGLVQRLDTLLLQLRAKCQRLMAMRRESNQRMADFAVADVSLFWLLN
ALNSAEPVLSDFLRYPAVHPELVWRELARLAGALLTFSLEHNVSAVPPYVHESPSTVFPPLFSLLSELLEASLPSRVIAL
DLASLPGNRWKADLHDPRLREEADFYLSVRSSLPAHQVLHQLPLVCKIGAPDDVTLLINVALNGVQLVPLTSVPAALPLR
LENQYFALDMHSDAAKSMLESGSCMIYAPGTMGDLKPELFAVLRT

Sequences:

>Translated_445_residues
MKIHRPLWAEGTFLSSQQFQQQARWEAFSNDCIAQLCIRHPWGIANVLFDRDALTPGKLKTQAVRLRFADGTLIDSDVSD
LLPLACDLRALKNDSAIVLLALPLAHGNGGNLGQGEQTERPLRYRQEWQKVQDIYGSDSEDMAVERHALSLRFAHDNNQD
YITCPLARLVRDVQGNWTQDESYIPPLLAFNAHDGLVQRLDTLLLQLRAKCQRLMAMRRESNQRMADFAVADVSLFWLLN
ALNSAEPVLSDFLRYPAVHPELVWRELARLAGALLTFSLEHNVSAVPPYVHESPSTVFPPLFSLLSELLEASLPSRVIAL
DLASLPGNRWKADLHDPRLREEADFYLSVRSSLPAHQVLHQLPLVCKIGAPDDVTLLINVALNGVQLVPLTSVPAALPLR
LENQYFALDMHSDAAKSMLESGSCMIYAPGTMGDLKPELFAVLRT
>Mature_445_residues
MKIHRPLWAEGTFLSSQQFQQQARWEAFSNDCIAQLCIRHPWGIANVLFDRDALTPGKLKTQAVRLRFADGTLIDSDVSD
LLPLACDLRALKNDSAIVLLALPLAHGNGGNLGQGEQTERPLRYRQEWQKVQDIYGSDSEDMAVERHALSLRFAHDNNQD
YITCPLARLVRDVQGNWTQDESYIPPLLAFNAHDGLVQRLDTLLLQLRAKCQRLMAMRRESNQRMADFAVADVSLFWLLN
ALNSAEPVLSDFLRYPAVHPELVWRELARLAGALLTFSLEHNVSAVPPYVHESPSTVFPPLFSLLSELLEASLPSRVIAL
DLASLPGNRWKADLHDPRLREEADFYLSVRSSLPAHQVLHQLPLVCKIGAPDDVTLLINVALNGVQLVPLTSVPAALPLR
LENQYFALDMHSDAAKSMLESGSCMIYAPGTMGDLKPELFAVLRT

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49731; Mature: 49731

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHRPLWAEGTFLSSQQFQQQARWEAFSNDCIAQLCIRHPWGIANVLFDRDALTPGKLK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCE
TQAVRLRFADGTLIDSDVSDLLPLACDLRALKNDSAIVLLALPLAHGNGGNLGQGEQTER
EEEEEEEECCCCEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCC
PLRYRQEWQKVQDIYGSDSEDMAVERHALSLRFAHDNNQDYITCPLARLVRDVQGNWTQD
HHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEEECCCCCCEEECHHHHHHHHHCCCCCCC
ESYIPPLLAFNAHDGLVQRLDTLLLQLRAKCQRLMAMRRESNQRMADFAVADVSLFWLLN
CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ALNSAEPVLSDFLRYPAVHPELVWRELARLAGALLTFSLEHNVSAVPPYVHESPSTVFPP
HHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHH
LFSLLSELLEASLPSRVIALDLASLPGNRWKADLHDPRLREEADFYLSVRSSLPAHQVLH
HHHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCCCCCCHHCHHHEEEEHHCCCHHHHHH
QLPLVCKIGAPDDVTLLINVALNGVQLVPLTSVPAALPLRLENQYFALDMHSDAAKSMLE
HCCCEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCCEEECCCEEEEECCCHHHHHHHH
SGSCMIYAPGTMGDLKPELFAVLRT
CCCEEEECCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MKIHRPLWAEGTFLSSQQFQQQARWEAFSNDCIAQLCIRHPWGIANVLFDRDALTPGKLK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCE
TQAVRLRFADGTLIDSDVSDLLPLACDLRALKNDSAIVLLALPLAHGNGGNLGQGEQTER
EEEEEEEECCCCEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCC
PLRYRQEWQKVQDIYGSDSEDMAVERHALSLRFAHDNNQDYITCPLARLVRDVQGNWTQD
HHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEEECCCCCCEEECHHHHHHHHHCCCCCCC
ESYIPPLLAFNAHDGLVQRLDTLLLQLRAKCQRLMAMRRESNQRMADFAVADVSLFWLLN
CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ALNSAEPVLSDFLRYPAVHPELVWRELARLAGALLTFSLEHNVSAVPPYVHESPSTVFPP
HHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHH
LFSLLSELLEASLPSRVIALDLASLPGNRWKADLHDPRLREEADFYLSVRSSLPAHQVLH
HHHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCCCCCCHHCHHHEEEEHHCCCHHHHHH
QLPLVCKIGAPDDVTLLINVALNGVQLVPLTSVPAALPLRLENQYFALDMHSDAAKSMLE
HCCCEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCCEEECCCEEEEECCCHHHHHHHH
SGSCMIYAPGTMGDLKPELFAVLRT
CCCEEEECCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA