| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is 91212186
Identifier: 91212186
GI number: 91212186
Start: 3104777
End: 3106114
Strand: Direct
Name: 91212186
Synonym: UTI89_C3192
Alternate gene names: NA
Gene position: 3104777-3106114 (Clockwise)
Preceding gene: 91212185
Following gene: 91212187
Centisome position: 61.29
GC content: 59.42
Gene sequence:
>1338_bases ATGAAAATTCATCGACCACTGTGGGCTGAGGGGACATTCCTGTCCTCTCAGCAGTTTCAGCAGCAGGCCCGCTGGGAAGC GTTCAGCAATGACTGTATTGCGCAGCTTTGTATTCGCCATCCGTGGGGGATCGCAAACGTGCTCTTTGACCGGGATGCCC TGACGCCCGGAAAGCTGAAAACGCAGGCAGTACGCCTGCGTTTTGCTGATGGCACGCTGATCGATTCAGACGTGAGTGAC CTTCTGCCGCTCGCCTGCGATCTGCGCGCGCTGAAGAACGACAGCGCGATTGTTTTGCTGGCGCTGCCGCTTGCACATGG TAACGGCGGTAATCTCGGTCAGGGTGAGCAGACTGAAAGACCGCTGCGCTATCGTCAGGAATGGCAAAAGGTGCAGGATA TCTACGGCAGTGACAGTGAAGATATGGCCGTTGAGCGTCATGCGCTGTCCCTGCGCTTTGCTCATGATAACAATCAGGAT TACATCACCTGCCCACTGGCGCGTCTGGTGCGGGATGTTCAGGGCAACTGGACACAGGATGAGAGCTATATTCCGCCGTT ACTGGCGTTTAACGCCCATGACGGGCTGGTACAGCGTCTGGACACATTGCTGTTGCAGCTACGGGCGAAGTGCCAGCGTC TGATGGCGATGCGCCGGGAAAGCAACCAGCGTATGGCGGACTTTGCCGTCGCCGATGTCTCCCTGTTCTGGCTGCTTAAC GCGCTGAATTCCGCCGAGCCGGTGCTGAGCGATTTCCTGCGCTACCCGGCTGTCCACCCCGAACTGGTCTGGCGGGAGCT GGCGAGGCTTGCCGGTGCGCTGCTGACGTTTTCCCTTGAGCATAACGTCAGCGCCGTTCCGCCCTATGTCCACGAATCGC CGTCCACCGTCTTTCCGCCCCTGTTCTCCCTGCTCAGCGAGCTGCTGGAAGCCAGCCTGCCGTCGCGGGTGATCGCGCTG GATCTGGCGTCCCTGCCGGGCAACCGCTGGAAAGCCGACCTGCACGATCCGCGACTGCGGGAAGAGGCCGATTTTTATCT GTCCGTTCGTTCCTCACTGCCTGCGCATCAGGTACTGCATCAGCTACCGCTGGTCTGCAAAATCGGTGCGCCCGATGATG TCACGCTGCTTATCAACGTGGCGCTGAACGGTGTTCAACTGGTGCCGCTTACCTCGGTTCCGGCGGCGCTGCCGCTGCGG CTGGAGAACCAGTATTTTGCGCTGGATATGCACAGTGACGCGGCTAAATCGATGCTGGAGTCCGGGAGCTGCATGATTTA TGCGCCGGGAACCATGGGCGACCTGAAACCTGAACTGTTTGCGGTGCTGCGCACATGA
Upstream 100 bases:
>100_bases TCTTTGCCGTGCCGCATTTCCAGATTGAAGGGATGGATATCAACCTTTCTCTGGTTTCCCAGATGCCGAAAGCGAAAGCC TGACCGGGCCGTGGTGTGAT
Downstream 100 bases:
>100_bases AAAAAGATATGGATATCAATATCGATGCGCTGCTGCGCGACACGTTTCTGACGGTGGTGGAACTGCGTCAGGGAACCACC GTGCGTCACGGTATCGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Type VI Secretion System Protein ImpJ; Type VI Secretion System Core Protein; T6ss M
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MKIHRPLWAEGTFLSSQQFQQQARWEAFSNDCIAQLCIRHPWGIANVLFDRDALTPGKLKTQAVRLRFADGTLIDSDVSD LLPLACDLRALKNDSAIVLLALPLAHGNGGNLGQGEQTERPLRYRQEWQKVQDIYGSDSEDMAVERHALSLRFAHDNNQD YITCPLARLVRDVQGNWTQDESYIPPLLAFNAHDGLVQRLDTLLLQLRAKCQRLMAMRRESNQRMADFAVADVSLFWLLN ALNSAEPVLSDFLRYPAVHPELVWRELARLAGALLTFSLEHNVSAVPPYVHESPSTVFPPLFSLLSELLEASLPSRVIAL DLASLPGNRWKADLHDPRLREEADFYLSVRSSLPAHQVLHQLPLVCKIGAPDDVTLLINVALNGVQLVPLTSVPAALPLR LENQYFALDMHSDAAKSMLESGSCMIYAPGTMGDLKPELFAVLRT
Sequences:
>Translated_445_residues MKIHRPLWAEGTFLSSQQFQQQARWEAFSNDCIAQLCIRHPWGIANVLFDRDALTPGKLKTQAVRLRFADGTLIDSDVSD LLPLACDLRALKNDSAIVLLALPLAHGNGGNLGQGEQTERPLRYRQEWQKVQDIYGSDSEDMAVERHALSLRFAHDNNQD YITCPLARLVRDVQGNWTQDESYIPPLLAFNAHDGLVQRLDTLLLQLRAKCQRLMAMRRESNQRMADFAVADVSLFWLLN ALNSAEPVLSDFLRYPAVHPELVWRELARLAGALLTFSLEHNVSAVPPYVHESPSTVFPPLFSLLSELLEASLPSRVIAL DLASLPGNRWKADLHDPRLREEADFYLSVRSSLPAHQVLHQLPLVCKIGAPDDVTLLINVALNGVQLVPLTSVPAALPLR LENQYFALDMHSDAAKSMLESGSCMIYAPGTMGDLKPELFAVLRT >Mature_445_residues MKIHRPLWAEGTFLSSQQFQQQARWEAFSNDCIAQLCIRHPWGIANVLFDRDALTPGKLKTQAVRLRFADGTLIDSDVSD LLPLACDLRALKNDSAIVLLALPLAHGNGGNLGQGEQTERPLRYRQEWQKVQDIYGSDSEDMAVERHALSLRFAHDNNQD YITCPLARLVRDVQGNWTQDESYIPPLLAFNAHDGLVQRLDTLLLQLRAKCQRLMAMRRESNQRMADFAVADVSLFWLLN ALNSAEPVLSDFLRYPAVHPELVWRELARLAGALLTFSLEHNVSAVPPYVHESPSTVFPPLFSLLSELLEASLPSRVIAL DLASLPGNRWKADLHDPRLREEADFYLSVRSSLPAHQVLHQLPLVCKIGAPDDVTLLINVALNGVQLVPLTSVPAALPLR LENQYFALDMHSDAAKSMLESGSCMIYAPGTMGDLKPELFAVLRT
Specific function: Unknown
COG id: COG3522
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49731; Mature: 49731
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIHRPLWAEGTFLSSQQFQQQARWEAFSNDCIAQLCIRHPWGIANVLFDRDALTPGKLK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCE TQAVRLRFADGTLIDSDVSDLLPLACDLRALKNDSAIVLLALPLAHGNGGNLGQGEQTER EEEEEEEECCCCEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCC PLRYRQEWQKVQDIYGSDSEDMAVERHALSLRFAHDNNQDYITCPLARLVRDVQGNWTQD HHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEEECCCCCCEEECHHHHHHHHHCCCCCCC ESYIPPLLAFNAHDGLVQRLDTLLLQLRAKCQRLMAMRRESNQRMADFAVADVSLFWLLN CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ALNSAEPVLSDFLRYPAVHPELVWRELARLAGALLTFSLEHNVSAVPPYVHESPSTVFPP HHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHH LFSLLSELLEASLPSRVIALDLASLPGNRWKADLHDPRLREEADFYLSVRSSLPAHQVLH HHHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCCCCCCHHCHHHEEEEHHCCCHHHHHH QLPLVCKIGAPDDVTLLINVALNGVQLVPLTSVPAALPLRLENQYFALDMHSDAAKSMLE HCCCEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCCEEECCCEEEEECCCHHHHHHHH SGSCMIYAPGTMGDLKPELFAVLRT CCCEEEECCCCCCCCCHHHHHHHCC >Mature Secondary Structure MKIHRPLWAEGTFLSSQQFQQQARWEAFSNDCIAQLCIRHPWGIANVLFDRDALTPGKLK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCE TQAVRLRFADGTLIDSDVSDLLPLACDLRALKNDSAIVLLALPLAHGNGGNLGQGEQTER EEEEEEEECCCCEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCC PLRYRQEWQKVQDIYGSDSEDMAVERHALSLRFAHDNNQDYITCPLARLVRDVQGNWTQD HHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEEECCCCCCEEECHHHHHHHHHCCCCCCC ESYIPPLLAFNAHDGLVQRLDTLLLQLRAKCQRLMAMRRESNQRMADFAVADVSLFWLLN CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ALNSAEPVLSDFLRYPAVHPELVWRELARLAGALLTFSLEHNVSAVPPYVHESPSTVFPP HHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHH LFSLLSELLEASLPSRVIALDLASLPGNRWKADLHDPRLREEADFYLSVRSSLPAHQVLH HHHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCCCCCCHHCHHHEEEEHHCCCHHHHHH QLPLVCKIGAPDDVTLLINVALNGVQLVPLTSVPAALPLRLENQYFALDMHSDAAKSMLE HCCCEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCCEEECCCEEEEECCCHHHHHHHH SGSCMIYAPGTMGDLKPELFAVLRT CCCEEEECCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA