| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is gutQ [H]
Identifier: 91212067
GI number: 91212067
Start: 2988207
End: 2989172
Strand: Direct
Name: gutQ [H]
Synonym: UTI89_C3070
Alternate gene names: 91212067
Gene position: 2988207-2989172 (Clockwise)
Preceding gene: 91212066
Following gene: 91212069
Centisome position: 58.99
GC content: 56.73
Gene sequence:
>966_bases ATGAGTGAAGCACTACTGAACGCGGGACGTCAGACGTTAATGCTGGAGTTGCAGGAAGCAAGCCATTTACCGGAACGTCT GGGCGATGATTTCGTTCGCGCCGCCAATATCATCCTGCACTGCGAAGGCAAAGTGGTGGTTTCGGGAATTGGCAAATCGG GCCACATTGGTAAGAAAATCGCCGCAACGCTTGCCAGCACCGGCACACCGGCTTTTTTTGTCCATCCGGCAGAAGCACTG CACGGCGATCTGGGGATGATTGAAAGCCGCGATGTGATGCTGTTTATCTCTTATTCCGGTGGCGCGAAGGAACTGGATCT CATTATTCCGCGTCTGGAAGACAAATCTATCGCGCTGCTGGCAATGACCGGAAAACCGACGTCACCGCTGGGCCTGGCGG CGAAAGCGGTGCTGGATATCTCCGTAGAGCGCGAAGCCTGCCCGATGCACCTTGCGCCGACCTCCAGCACCGTGAATACC CTGATGATGGGCGACGCGCTGGCGATGGCGGTCATGCAGGCGCGCGGATTTAATGAAGAAGATTTTGCCCGCTCCCACCC AGCCGGGGCACTGGGCGCTCGCTTGCTGAACAAAGTGCATCATCTTATGCGTCGTGACGATGCCATCCCGCAGGTGGCGT TAACCGCCAGCGTGATGGACGCAATGCTGGAACTTAGCCGCACCGGTTTAGGTCTGGTGGCAGTGTGCGATGATCAACGA CTGGTGAAAGGCGTCTTTACCGACGGTGATTTACGTCGCTGGCTGGTTGGCGGCGGCGCACTCACCACGCCAGTCAATGA AGCGATGACGGTCGGCGGCACCACGTTGCAATCGCAAAGCCGTGCCATCGACGCCAAAGAAATCCTGATGAAACGCAAAA TCACCGCCGCACCGGTAGTGGATGAAAACGGCAAACTCACCGGCGCAATTAACCTGCAGGATTTCTATCAGGCCGGGATT ATTTAA
Upstream 100 bases:
>100_bases GAAAGCGTCGATAAGCTGATTACCGACGCAGGTATCGATCCAGCGTTTCGTCAGGCGCTGGAAGAAAAAGGGATCGACGT GATCATAACCGGAGAGAGCA
Downstream 100 bases:
>100_bases TCCTTCAGCCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCACAGGCGGCCCAGTT GTGATGATTTTGCGCCAGTG
Product: D-arabinose 5-phosphate isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSEALLNAGRQTLMLELQEASHLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNT LMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDDQR LVKGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI I
Sequences:
>Translated_321_residues MSEALLNAGRQTLMLELQEASHLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNT LMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDDQR LVKGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI I >Mature_320_residues SEALLNAGRQTLMLELQEASHLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALH GDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTL MMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDDQRL VKGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGII
Specific function: Not Known. [C]
COG id: COG0794
COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI87082151, Length=321, Percent_Identity=98.4423676012461, Blast_Score=638, Evalue=0.0, Organism=Escherichia coli, GI1789588, Length=316, Percent_Identity=45.8860759493671, Blast_Score=284, Evalue=5e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR004800 - InterPro: IPR001347 [H]
Pfam domain/function: PF00571 CBS; PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 34070; Mature: 33939
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEALLNAGRQTLMLELQEASHLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKI CCCHHHHCCCCEEEEEEHHHHCCHHHHCHHHHHHCCEEEEECCEEEEEECCCCCCCHHHH AATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALL HHHHHCCCCCEEEECCHHHHCCCCCCEECCCEEEEEEECCCCCEEEEEEECCCCCCEEEE AMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEE EECCCCCCCHHHHHHHHEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHH DFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDDQR HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCH LVKGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVV HHHEECCCCCCEEEEECCCCCCCCCHHHEECCCCEECCHHHCCCHHHHHHHHCCCCCCEE DENGKLTGAINLQDFYQAGII CCCCCEEEEEEHHHHHHHCCC >Mature Secondary Structure SEALLNAGRQTLMLELQEASHLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKI CCHHHHCCCCEEEEEEHHHHCCHHHHCHHHHHHCCEEEEECCEEEEEECCCCCCCHHHH AATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALL HHHHHCCCCCEEEECCHHHHCCCCCCEECCCEEEEEEECCCCCEEEEEEECCCCCCEEEE AMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEE EECCCCCCCHHHHHHHHEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHH DFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDDQR HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCH LVKGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVV HHHEECCCCCCEEEEECCCCCCCCCHHHEECCCCEECCHHHCCCHHHHHHHHCCCCCCEE DENGKLTGAINLQDFYQAGII CCCCCEEEEEEHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 2134185 [H]