| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is srlE [H]
Identifier: 91212062
GI number: 91212062
Start: 2984785
End: 2985744
Strand: Direct
Name: srlE [H]
Synonym: UTI89_C3065
Alternate gene names: 91212062
Gene position: 2984785-2985744 (Clockwise)
Preceding gene: 91212061
Following gene: 91212063
Centisome position: 58.92
GC content: 55.73
Gene sequence:
>960_bases ATGACACGCATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCCCGCTTGAGCTGGAAGCCACGCCGGGCAAAAAAAT CGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAAGCTATCGACGGAT TTAAAGAAGGTGAACCCGCGGAGGCGGAAATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTAT CCGAAACGGCGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGCCCGCTGGCGCAGTACATTGTGGAAGATAT TTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTGGGTGAGGCGACACCACAACCCTCTTCCGTGGGCCGTGACT ATGACACCAGCAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGTATGGGTTCTGCCGTTGCC GTGCTGTTCCAGTCTGGCCGTGACACCATCGACACTGTATTAAAAACCATTCTGCCGTTTATGGCGTTCGTCTCGGCGCT TATCGGCATCATTATGGCTTCTGGCCTTGGTGACTGGATTGCCCACGGTCTTGCTCCGCTGGCGAGCCATCCACTGGGTC TGGTCATGCTGGCGCTCATCTGCTCCTTCCCGCTGCTTTCACCTTTCCTCGGCCCAGGCGCAGTTATCGCACAGGTTATC GGCGTATTGATTGGCGTGCAGATTGGTCTCGGCAATATTCCGCCGCATCTGGCTTTACCTGCACTGTTTGCCATCAACGC GCAGGCGGCCTGCGACTTCATCCCGGTCGGTTTGTCGCTGGCGGAAGCCCGTCAGGACACGGTTCGCGTCGGTGTCCCTT CTGTTCTGGTGAGCCGCTTTTTAACCGGCGCGCCAACTGTACTGATCGCCTGGTTTGTCTCCGGTTTTATCTATCAATAG
Upstream 100 bases:
>100_bases ACTTCTTCCGCGGCTGGGTAACCGATCTGACCACCGCCATTTTCGAGAAAAAGATGGGCATTCAACTTGAACAAAAAGTT CGTCTGGCAGGAGCAACATC
Downstream 100 bases:
>100_bases AGGCTGAAACATGACCGTTATTTATCAGACCACCATCACCCGTATTGGCGCGAGTGCCACTGACGCCCTCAGCGACCAGA TGCTCATCACCTTTCGTGAA
Product: PTS system glucitol-sorbitol-specific transporter subunit IIBC
Products: NA
Alternate protein names: EII-Gut; PTS system glucitol/sorbitol-specific EIIB component [H]
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MTRIRIEKGTGGWGGPLELEATPGKKIVYITAGTRPAIVDKLAQLTGWQAIDGFKEGEPAEAEIGVAVIDCGGTLRCGIY PKRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITVVGEATPQPSSVGRDYDTSKKITEQSDGLLAKVGMGMGSAVA VLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLALICSFPLLSPFLGPGAVIAQVI GVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEARQDTVRVGVPSVLVSRFLTGAPTVLIAWFVSGFIYQ
Sequences:
>Translated_319_residues MTRIRIEKGTGGWGGPLELEATPGKKIVYITAGTRPAIVDKLAQLTGWQAIDGFKEGEPAEAEIGVAVIDCGGTLRCGIY PKRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITVVGEATPQPSSVGRDYDTSKKITEQSDGLLAKVGMGMGSAVA VLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLALICSFPLLSPFLGPGAVIAQVI GVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEARQDTVRVGVPSVLVSRFLTGAPTVLIAWFVSGFIYQ >Mature_318_residues TRIRIEKGTGGWGGPLELEATPGKKIVYITAGTRPAIVDKLAQLTGWQAIDGFKEGEPAEAEIGVAVIDCGGTLRCGIYP KRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITVVGEATPQPSSVGRDYDTSKKITEQSDGLLAKVGMGMGSAVAV LFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLALICSFPLLSPFLGPGAVIAQVIG VLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEARQDTVRVGVPSVLVSRFLTGAPTVLIAWFVSGFIYQ
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG3732
COG function: function code G; Phosphotransferase system sorbitol-specific component IIBC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-5 domain [H]
Homologues:
Organism=Escherichia coli, GI48994905, Length=319, Percent_Identity=98.7460815047022, Blast_Score=629, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011638 - InterPro: IPR011618 - InterPro: IPR004702 [H]
Pfam domain/function: PF07663 EIIBC-GUT_C; PF03612 EIIBC-GUT_N [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 33336; Mature: 33205
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00107 PROTEIN_KINASE_ATP ; PS51102 PTS_EIIB_TYPE_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIRIEKGTGGWGGPLELEATPGKKIVYITAGTRPAIVDKLAQLTGWQAIDGFKEGEPA CCEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCHHHCCCCCCCCC EAEIGVAVIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITVV CCCCCEEEEECCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEE GEATPQPSSVGRDYDTSKKITEQSDGLLAKVGMGMGSAVAVLFQSGRDTIDTVLKTILPF ECCCCCCHHCCCCCCCHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHH MAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLALICSFPLLSPFLGPGAVIAQVI HHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEARQDTVRVGVPSVLVSRF HHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCEEECCHHHHHHHHHHHHCCHHHHHHHHH LTGAPTVLIAWFVSGFIYQ HCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TRIRIEKGTGGWGGPLELEATPGKKIVYITAGTRPAIVDKLAQLTGWQAIDGFKEGEPA CEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCHHHCCCCCCCCC EAEIGVAVIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITVV CCCCCEEEEECCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEE GEATPQPSSVGRDYDTSKKITEQSDGLLAKVGMGMGSAVAVLFQSGRDTIDTVLKTILPF ECCCCCCHHCCCCCCCHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHH MAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLALICSFPLLSPFLGPGAVIAQVI HHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEARQDTVRVGVPSVLVSRF HHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCEEECCHHHHHHHHHHHHCCHHHHHHHHH LTGAPTVLIAWFVSGFIYQ HCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3553176; 9205837; 9278503 [H]