| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yfiR [H]
Identifier: 91211937
GI number: 91211937
Start: 2886074
End: 2886592
Strand: Direct
Name: yfiR [H]
Synonym: UTI89_C2936
Alternate gene names: 91211937
Gene position: 2886074-2886592 (Clockwise)
Preceding gene: 91211936
Following gene: 91211938
Centisome position: 56.97
GC content: 43.93
Gene sequence:
>519_bases ATGCGTTTTTCTCACCGACTGTTCTTACTGCTGATTCTCCTGCTGACGGGAGCACCAATACTCGCTCAGGAACCTTCTGA CGTTGCGAAAAACGTGCGTATGATGGTTTCCGGTATTGTCAGTTACACCCGCTGGCCTGGGCTATCAGGGCCACCAAAGT TATGTATCTTTTCATCTTCACGTTTTAGTACCGCCTTACAAGAAAATGCTGCTACATCTTTGCCTTATCTGCCTGTCATC ATTCATACTCAACAAGAGGCGATAATTTCAGGCTGCAATGGTTTTTATTTTGGCAACGAGTCACCGACATTCCAGATGGA ATTAACCGAACAATATCCGTCAAAGGCGTTATTATTAATTGCCGAACAAAATACCGAGTGCATTATTGGTAGCGCCTTTT GTCTGATCATCCACAATAATGACGTCAGATTTGCCGTAAACCTGGATGCTTTATCTCGTAGCGGTGTAAAAGTCAACCCG GATGTCTTAATGCTCGCACGGAAGAAAAATGATGGATAA
Upstream 100 bases:
>100_bases ATTTTTCACATTGATGACGACCGCATGAAAGGATGATATTTTAATGAGCATTCTGAAAAAATATCGATGCATTTCGAGCG AAGATGGTGAGGATCCCTGA
Downstream 100 bases:
>100_bases CGATAATTCTCTTAATAAGCGCCCCACGTTTAAAAGAGCATTACGCAACATCAGTATGACCAGCATATTTATCACTATGA TGCTGATCTGGCTGCTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTRWPGLSGPPKLCIFSSSRFSTALQENAATSLPYLPVI IHTQQEAIISGCNGFYFGNESPTFQMELTEQYPSKALLLIAEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNP DVLMLARKKNDG
Sequences:
>Translated_172_residues MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTRWPGLSGPPKLCIFSSSRFSTALQENAATSLPYLPVI IHTQQEAIISGCNGFYFGNESPTFQMELTEQYPSKALLLIAEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNP DVLMLARKKNDG >Mature_172_residues MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTRWPGLSGPPKLCIFSSSRFSTALQENAATSLPYLPVI IHTQQEAIISGCNGFYFGNESPTFQMELTEQYPSKALLLIAEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNP DVLMLARKKNDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788955, Length=172, Percent_Identity=98.8372093023256, Blast_Score=353, Evalue=5e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18946; Mature: 18946
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTRWPGLSGPPKLCIFSSS CCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC RFSTALQENAATSLPYLPVIIHTQQEAIISGCNGFYFGNESPTFQMELTEQYPSKALLLI HHHHHHHHCCCCCCCCEEEEEECCHHHHHCCCCEEEECCCCCEEEEEECCCCCCEEEEEE AEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNPDVLMLARKKNDG EECCCCEEEEEEEEEEEECCCEEEEEEEHHHCCCCCEECCCEEEEEEECCCC >Mature Secondary Structure MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTRWPGLSGPPKLCIFSSS CCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC RFSTALQENAATSLPYLPVIIHTQQEAIISGCNGFYFGNESPTFQMELTEQYPSKALLLI HHHHHHHHCCCCCCCCEEEEEECCHHHHHCCCCEEEECCCCCEEEEEECCCCCCEEEEEE AEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNPDVLMLARKKNDG EECCCCEEEEEEEEEEEECCCEEEEEEEHHHCCCCCEECCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]