| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yfiM [H]
Identifier: 91211914
GI number: 91211914
Start: 2865673
End: 2866017
Strand: Direct
Name: yfiM [H]
Synonym: UTI89_C2909
Alternate gene names: 91211914
Gene position: 2865673-2866017 (Clockwise)
Preceding gene: 91211913
Following gene: 91211916
Centisome position: 56.57
GC content: 52.75
Gene sequence:
>345_bases TTGTTTTTTGGAGGCCACGTTTTGCGTATTCTTTTTGTCTGTTCGCTATTGTTACTTTCTGGATGCAGCCATATGGCTAA CGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTCAC AGCATCAGGGGATGAGCCGGGATCGCAGTGCCATGTTTGGATTGATGTTCTCTGTCAGTCTGGGGGCGTCAAAAGAGCTT TGGGATAGCCGCCCTGAGGGGAGCGGCTGGAGCTGGAAGGATTTTGCCTGGGATATCGCCGGTGCAAGCACCGGCTATAC CGTCTGGCAACTGACCCGTCACTAA
Upstream 100 bases:
>100_bases TCCGGTGAAGGTTCGTAAACTCATCCGCCGTTTGCGCCGTATCCGCATCGACCGATTAATTAGCCGCATCCTGTAATCAC AACCCCGTCCTGTACGGGGT
Downstream 100 bases:
>100_bases AGCCGCATCCCTTTTCCTTTACGGTGCAATGTTAGTGAAACCAGAAACGCCACCACGGCCATCAAGGTCACATACCAGAA GAAGGCTGTTTCCATTCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MFFGGHVLRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKEL WDSRPEGSGWSWKDFAWDIAGASTGYTVWQLTRH
Sequences:
>Translated_114_residues MFFGGHVLRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKEL WDSRPEGSGWSWKDFAWDIAGASTGYTVWQLTRH >Mature_114_residues MFFGGHVLRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKEL WDSRPEGSGWSWKDFAWDIAGASTGYTVWQLTRH
Specific function: Unknown
COG id: COG5544
COG function: function code R; Predicted periplasmic lipoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI145693173, Length=107, Percent_Identity=97.196261682243, Blast_Score=214, Evalue=8e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018736 - InterPro: IPR017028 [H]
Pfam domain/function: PF10043 DUF2279 [H]
EC number: NA
Molecular weight: Translated: 12611; Mature: 12611
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFGGHVLRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSR CCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCH DRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDFAWDIAGASTGYTVWQLTRH HHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECC >Mature Secondary Structure MFFGGHVLRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSR CCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCH DRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDFAWDIAGASTGYTVWQLTRH HHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 2002065; 2118499; 7567469 [H]