| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yfhL [H]
Identifier: 91211887
GI number: 91211887
Start: 2841410
End: 2841670
Strand: Direct
Name: yfhL [H]
Synonym: UTI89_C2882
Alternate gene names: 91211887
Gene position: 2841410-2841670 (Clockwise)
Preceding gene: 162138389
Following gene: 91211894
Centisome position: 56.09
GC content: 44.83
Gene sequence:
>261_bases ATGGCGCTGTTAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCGATGGG TGAACATATCTACGAGATTAACAGCGATAAGTGTACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGT GTCCGATCCCCAATACTATTGTGAAAGATCCGCAACATGTCGAGACGGAAGAACAGTTGTGGGATAAATTTGTGCTGATG CACCACGCGGATAAAATTTAA
Upstream 100 bases:
>100_bases GAACGTATTCGTCATAGCGAAGCGCTGGTGAAAAAACTGGTCTGAGTAAAGAATGCGCGTATAATGCCCGCCCGGTTTGT GTTGTTTTGAGAGTTTCCTT
Downstream 100 bases:
>100_bases TATTCTGCTCTGGAAGTAGAGTGTTAATTATTTTATAGAAAAATCTTAACGCTATTATATTTATTTAAATGATGATATTA GCATAATCATTCACTAAGTT
Product: putative ferredoxin-like protein YfhL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MALLITKKCINCDMCEPECPNEAISMGEHIYEINSDKCTECVGHYETPTCQKVCPIPNTIVKDPQHVETEEQLWDKFVLM HHADKI
Sequences:
>Translated_86_residues MALLITKKCINCDMCEPECPNEAISMGEHIYEINSDKCTECVGHYETPTCQKVCPIPNTIVKDPQHVETEEQLWDKFVLM HHADKI >Mature_85_residues ALLITKKCINCDMCEPECPNEAISMGEHIYEINSDKCTECVGHYETPTCQKVCPIPNTIVKDPQHVETEEQLWDKFVLMH HADKI
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Escherichia coli, GI1788914, Length=86, Percent_Identity=97.6744186046512, Blast_Score=174, Evalue=9e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9862; Mature: 9731
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 14.0 %Cys+Met (Translated Protein) 9.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 12.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLITKKCINCDMCEPECPNEAISMGEHIYEINSDKCTECVGHYETPTCQKVCPIPNTI CCEEECCCCCCCCCCCCCCCHHHHHHHHHHEECCCCHHHHHHCCCCCCCCCCCCCCCCHH VKDPQHVETEEQLWDKFVLMHHADKI HCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ALLITKKCINCDMCEPECPNEAISMGEHIYEINSDKCTECVGHYETPTCQKVCPIPNTI CEEECCCCCCCCCCCCCCCHHHHHHHHHHEECCCCHHHHHHCCCCCCCCCCCCCCCCHH VKDPQHVETEEQLWDKFVLMHHADKI HCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]