| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yphH [H]
Identifier: 91211874
GI number: 91211874
Start: 2824724
End: 2825917
Strand: Direct
Name: yphH [H]
Synonym: UTI89_C2869
Alternate gene names: 91211874
Gene position: 2824724-2825917 (Clockwise)
Preceding gene: 91211866
Following gene: 91211876
Centisome position: 55.76
GC content: 51.42
Gene sequence:
>1194_bases ATGAGAGCCTGCATTAACAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCG CGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAATTTCGATTCCGGCGGTCAGTAATATTTTGCAGGAACTGGAAAGCG AAAAACGGGTGGTGAATATCGACGATGAAAGCCAGACGCGCGGGCATAGTAGCGGTACATGGCTGATTGCGCCGGAAGGA GACTGGACGCTGTGCCTGAACGTGACGCCCACCAGCATTGAGTGTCAGGTCGCTAATGCCTGTTTAAGTCCGAAAGGCGA ATTTGAGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTA AATTGTGGCCGGACCGCACCATCAATCTGGCTCTGGCAATCCACGGTCAGGTTGATCCAGTGACCGGCGTGTCGCAAACC ATGCCGCAAGCGCCGTGGGCAACACCGATTGAGGTGAAGTACCTGCTGGAAGAGAAGCTGGGCATTCGGGTAATGGTCGA TAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCACAAGTGCGTGATTTCTGCGTAATCAACGTTG ATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGCAGTGGACAGATTGGTCAC ACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGCGGGCGTTATGGCTGCCTGGAAACCGTCGCCTCGTTAAGCGCATT AAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAATACTCAGCTTGATCCTGAAAAATTGACTACCGCGCAGT TAATCGCTGCCTGGCAGAGTGGAGAACCGTGGATCACCAGTTGGGTTGACCACAGTGCCAACGCCATTGGTTTGAGTCTG TATAACTTCCTCAACATCCTCAATATTAATCAGATTTGGTTGTACGGTCGCAGTTGTGCCTTTGGTGAGAACTGGCTTAA TACCATTATTCGCCAGACGGGATTTAACCCGTTCGACCGCGACGAAGGACCGAGCGTGAAAGCGACACAGATTGGCTTTG GGCAATTAAGCCGCGCACAACAGGTACTGGGAATTGGCTATTTGTATGTTGAGGCGCAGTTACGGCAGATTTGA
Upstream 100 bases:
>100_bases CAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCGGAATAATCACGCAATTAA CTAAACAAGGTTTAGTAAAG
Downstream 100 bases:
>100_bases TGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTTTTTCAACAGATTAACCGTTTCGCTTATGCGTAAACCGGGT AACGTGCGCAGATGTCGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVVNIDDESQTRGHSSGTWLIAPEG DWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDAPTPQALLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQT MPQAPWATPIEVKYLLEEKLGIRVMVDNDCVMLALAEKWQNNSQVRDFCVINVDYGIGSSFVINEQIYRGSLYGSGQIGH TIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLKSQPVNTQLDPEKLTTAQLIAAWQSGEPWITSWVDHSANAIGLSL YNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI
Sequences:
>Translated_397_residues MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVVNIDDESQTRGHSSGTWLIAPEG DWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDAPTPQALLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQT MPQAPWATPIEVKYLLEEKLGIRVMVDNDCVMLALAEKWQNNSQVRDFCVINVDYGIGSSFVINEQIYRGSLYGSGQIGH TIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLKSQPVNTQLDPEKLTTAQLIAAWQSGEPWITSWVDHSANAIGLSL YNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI >Mature_397_residues MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVVNIDDESQTRGHSSGTWLIAPEG DWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDAPTPQALLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQT MPQAPWATPIEVKYLLEEKLGIRVMVDNDCVMLALAEKWQNNSQVRDFCVINVDYGIGSSFVINEQIYRGSLYGSGQIGH TIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLKSQPVNTQLDPEKLTTAQLIAAWQSGEPWITSWVDHSANAIGLSL YNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI
Specific function: Unknown
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI298566325, Length=222, Percent_Identity=27.027027027027, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI298566315, Length=222, Percent_Identity=27.027027027027, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI190014632, Length=222, Percent_Identity=27.027027027027, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI4885285, Length=222, Percent_Identity=27.027027027027, Blast_Score=72, Evalue=6e-13, Organism=Escherichia coli, GI87082127, Length=397, Percent_Identity=98.4886649874055, Blast_Score=809, Evalue=0.0, Organism=Escherichia coli, GI1787878, Length=333, Percent_Identity=24.3243243243243, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1786891, Length=348, Percent_Identity=24.4252873563218, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR011991 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: NA
Molecular weight: Translated: 44502; Mature: 44502
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVVNI CCCCCCCCHHHHCCCEEEHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEC DDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDAPTPQA CCCHHCCCCCCCEEEEEECCCEEEEEEECCCCEEEEEEHHHCCCCCCEEEEEECCCCHHH LLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQTMPQAPWATPIEVKYLLEEKL HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHCCCCCCCCCHHHHEEEHHCC GIRVMVDNDCVMLALAEKWQNNSQVRDFCVINVDYGIGSSFVINEQIYRGSLYGSGQIGH CEEEEECCCEEEEEEHHHCCCCCCEEEEEEEEEECCCCCEEEEECHHEECCCCCCCCCCC TIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLKSQPVNTQLDPEKLTTAQLIAAWQS EEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCC GEPWITSWVDHSANAIGLSLYNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPFDR CCCCEEHHHCCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCC DEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI CCCCCEEEEEECCHHHHHHHHHHHEEEEEEEEHHHCC >Mature Secondary Structure MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVVNI CCCCCCCCHHHHCCCEEEHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEC DDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDAPTPQA CCCHHCCCCCCCEEEEEECCCEEEEEEECCCCEEEEEEHHHCCCCCCEEEEEECCCCHHH LLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQTMPQAPWATPIEVKYLLEEKL HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHCCCCCCCCCHHHHEEEHHCC GIRVMVDNDCVMLALAEKWQNNSQVRDFCVINVDYGIGSSFVINEQIYRGSLYGSGQIGH CEEEEECCCEEEEEEHHHCCCCCCEEEEEEEEEECCCCCEEEEECHHEECCCCCCCCCCC TIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLKSQPVNTQLDPEKLTTAQLIAAWQS EEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCC GEPWITSWVDHSANAIGLSLYNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPFDR CCCCEEHHHCCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCC DEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI CCCCCEEEEEECCHHHHHHHHHHHEEEEEEEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]