| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yeiA [H]
Identifier: 91211433
GI number: 91211433
Start: 2376469
End: 2377710
Strand: Direct
Name: yeiA [H]
Synonym: UTI89_C2420
Alternate gene names: 91211433
Gene position: 2376469-2377710 (Clockwise)
Preceding gene: 91211432
Following gene: 91211438
Centisome position: 46.91
GC content: 50.16
Gene sequence:
>1242_bases TTGCTCATGTTAACGAAAGATCTTTCGATTACTTTTTGCGGCGTGAAGTTTCCCAACCCGTTCTGCCTTTCTTCTTCGCC GGTAGGCAACTGCTATGAGATGTGCGCCAAAGCCTACGACACAGGTTGGGGCGGCGTGGTGTTTAAAACGATCGGTTTTT TTATCGCCAACGAAGTCTCGCCGCGTTTTGATCATCTGGTGAAAGAAGATACCGGTTTTATCGGCTTCAAAAATATGGAG CAGATTGCTGAACATCCGTTGGAAGAGAATCTGGCCGCCCTGCGTCGGCTGAAAGAAGATTACCCGGACAAAGTATTGAT CGCTTCAATCATGGGCGAAAATGAGCAGCAATGGGAAGAGCTGGCGCGTCTGGTGCAAGAAGCTGGCGCGGATATGATCG AGTGTAACTTCTCCTGTCCGCAAATGACTTCTCATGCGATGGGTAGCGATGTCGGGCAAAGCCCGGAGCTGGTAGAAAAA TATTGTCGGGCAGTAAAACGTGGTTCCACGCTGCCAATGCTGGCGAAGATGACGCCGAATATTGGTGATATGTGCGAAGT GGCGCTGGCGGCGAAGCGCGGCGGCGCAGATGGCATTGCGGCGATTAACACCGTTAAATCCATCACCAATATCGATCTTA ATCAGAAAATTGGTATGCCGATCGTTAACGGTAAATCGAGTATTTCCGGATATTCCGGTAAAGCGGTAAAACCGATCGCC CTACGCTTTATTCAGCAAATGCGCACCCATCCAGAACTGCGCGATTTCCCGATCAGCGGTATCGGCGGCATTGAAACCTG GGAAGATGCGGCGGAGTTTTTATTGCTCGGCGCAGCGACGTTGCAGGTGACCACCGGCATTATGCAGTACGGGTATCGGA TAGTGGAAGATATGGCAAGCGGGTTGTCGCATTATCTCGCCGATCAAGGGTTTGATTCGTTGCAGGAGATGGTGGGTCTG GCGAATCACAATATTGTCCCGGCGGAAGATTTAGACCGCAGTTATATTGTCTATCCCCATATCAATCTTGATAAATGTGT TGGCTGTGGACGCTGTTATATTTCCTGTTACGACGGCGGTCACCAGGCGATGGAATGGAGCGAGAAAACCCGCACACCGC ATTGTAATACCGAGAAATGCGTGGGTTGTCTGCTTTGTGGTCATGTCTGCCCGGTAGGTTGTATTGATCTTGGGGAAGTG AAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAA
Upstream 100 bases:
>100_bases TTGCTGCTGGCGATATTGTTGAGGGTGACAAAACCGTGGTCTATGCAGTGAAAACCGGGAAAGAAGCCGCCGGGGCGATT CATCACTATTTAGAGGGAGC
Downstream 100 bases:
>100_bases AACCAGCGACGCATCCGGCATTTAGTTCCTGTCGCCGGATGCGGCGTGAACGCCTTACCCGGCATACAAAACAATATAAA TCAGTATGTTGTGCTCATTG
Product: dihydropyrimidine dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MLMLTKDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVSPRFDHLVKEDTGFIGFKNME QIAEHPLEENLAALRRLKEDYPDKVLIASIMGENEQQWEELARLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEK YCRAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIA LRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFDSLQEMVGL ANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRTPHCNTEKCVGCLLCGHVCPVGCIDLGEV KFKKGEKEHPVTL
Sequences:
>Translated_413_residues MLMLTKDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVSPRFDHLVKEDTGFIGFKNME QIAEHPLEENLAALRRLKEDYPDKVLIASIMGENEQQWEELARLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEK YCRAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIA LRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFDSLQEMVGL ANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRTPHCNTEKCVGCLLCGHVCPVGCIDLGEV KFKKGEKEHPVTL >Mature_413_residues MLMLTKDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVSPRFDHLVKEDTGFIGFKNME QIAEHPLEENLAALRRLKEDYPDKVLIASIMGENEQQWEELARLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEK YCRAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIA LRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFDSLQEMVGL ANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQAMEWSEKTRTPHCNTEKCVGCLLCGHVCPVGCIDLGEV KFKKGEKEHPVTL
Specific function: Unknown
COG id: COG0167
COG function: function code F; Dihydroorotate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=328, Percent_Identity=35.9756097560976, Blast_Score=196, Evalue=3e-50, Organism=Escherichia coli, GI87082059, Length=411, Percent_Identity=99.2700729927007, Blast_Score=851, Evalue=0.0, Organism=Caenorhabditis elegans, GI71984108, Length=475, Percent_Identity=33.6842105263158, Blast_Score=245, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6322633, Length=240, Percent_Identity=27.9166666666667, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI24640763, Length=315, Percent_Identity=38.7301587301587, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI18858217, Length=315, Percent_Identity=38.7301587301587, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI281361352, Length=337, Percent_Identity=24.3323442136499, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI17137316, Length=337, Percent_Identity=24.3323442136499, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013785 - InterPro: IPR005720 - InterPro: IPR012135 - InterPro: IPR012285 [H]
Pfam domain/function: PF01180 DHO_dh [H]
EC number: NA
Molecular weight: Translated: 45304; Mature: 45304
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMLTKDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVS CEEEEECCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC PRFDHLVKEDTGFIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGENEQQWEE HHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCEEHHHHHCCCHHHHHH LARLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPN HHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCC IGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHH LRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMAS HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLSHYLADQGFDSLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGG HHHHHHHHCCHHHHHHHHHHHCCCCCCHHHCCCCEEEEECCCHHHHCCCCEEEEEEECCC HQAMEWSEKTRTPHCNTEKCVGCLLCGHVCPVGCIDLGEVKFKKGEKEHPVTL CHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCC >Mature Secondary Structure MLMLTKDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVS CEEEEECCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC PRFDHLVKEDTGFIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGENEQQWEE HHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCEEHHHHHCCCHHHHHH LARLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPN HHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCC IGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHH LRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMAS HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLSHYLADQGFDSLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGG HHHHHHHHCCHHHHHHHHHHHCCCCCCHHHCCCCEEEEECCCHHHHCCCCEEEEEEECCC HQAMEWSEKTRTPHCNTEKCVGCLLCGHVCPVGCIDLGEVKFKKGEKEHPVTL CHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 1719366 [H]