| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is hisF [H]
Identifier: 91211311
GI number: 91211311
Start: 2234251
End: 2235027
Strand: Direct
Name: hisF [H]
Synonym: UTI89_C2298
Alternate gene names: 91211311
Gene position: 2234251-2235027 (Clockwise)
Preceding gene: 91211310
Following gene: 91211312
Centisome position: 44.11
GC content: 52.9
Gene sequence:
>777_bases ATGCTGGCAAAACGCATAATCCCTTGTCTCGACGTTCGTGATGGTCAGGTGGTGAAAGGCGTACAGTTTCGCAACCATGA AATCATTGGCGATATCGTGCCACTGGCAAAACGCTACGCCGAAGAAGGTGCAGATGAACTGGTGTTCTACGATATCACCG CTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTCTGTGTGGCG GGTGGGATTAAGTCTCTGGAAGATGCCGCGAAAATTCTTTCCTTTGGCGCGGATAAAATCTCCATTAACTCCCCTGCGCT GGCGGACCCGACGTTAATTACTCGCCTGGCGGATCGCTTTGGCGTGCAGTGTATTGTGGTCGGCATTGATACCTGGTACG ACGCCGAAACCGGTAAATATCATGTGAATCAATATACCGGCGATGAAAGCCGCACCCGCGTCACTCAGTGGGAAACACTC GACTGGGTGCAGGAAGTGCAAAAACGCGGCGCCGGAGAAATCGTCCTCAACATGATGAATCAGGACGGCGTGCGTAACGG TTACGACCTCAAGCAGCTGAAAAAAGTGCGTGAAGTTTGCCACGTCCCGCTGATTGCCTCCGGTGGCGCGGGCACCATGG AACACTTCCTGGAAGCCTTCCGCGATGCCGACGTTGACGGTGCGCTGGCAGCTTCCGTATTCCACAAACAAATAATCAAT ATTGGCGAATTAAAAGCGTACCTGGCAACACAGGGCGTGGAGATCAGGATATGTTAA
Upstream 100 bases:
>100_bases ACATTAACGATGTGGCGGCCCTGCGTGGTACTGGTGTACGCGGCGTAATAGTTGGTCGTGCATTACTGGAAGGTAAATTC ACCGTGAAGGAGGCCATCGC
Downstream 100 bases:
>100_bases CAGAACAACAACGTCGCGAACTGGACTGGGAAAAAACCGACGGTCTGATGCCGGTGATTGTGCAACACGCGGTATCCGGC GAAGTGTTAATGCTGGGCTA
Product: imidazole glycerol phosphate synthase subunit HisF
Products: NA
Alternate protein names: IGP synthase cyclase subunit; IGP synthase subunit hisF; ImGP synthase subunit hisF; IGPS subunit hisF [H]
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVA GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL DWVQEVQKRGAGEIVLNMMNQDGVRNGYDLKQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN IGELKAYLATQGVEIRIC
Sequences:
>Translated_258_residues MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVA GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL DWVQEVQKRGAGEIVLNMMNQDGVRNGYDLKQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN IGELKAYLATQGVEIRIC >Mature_258_residues MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVA GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL DWVQEVQKRGAGEIVLNMMNQDGVRNGYDLKQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN IGELKAYLATQGVEIRIC
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the hisH subunit [H]
COG id: COG0107
COG function: function code E; Imidazoleglycerol-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI1788336, Length=258, Percent_Identity=99.6124031007752, Blast_Score=527, Evalue=1e-151, Organism=Escherichia coli, GI87082028, Length=231, Percent_Identity=25.974025974026, Blast_Score=66, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6319725, Length=318, Percent_Identity=31.1320754716981, Blast_Score=131, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR004651 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: 4.1.3.-
Molecular weight: Translated: 28454; Mature: 28454
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV CCHHHCCCCCCCCCCCEEECEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCE VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF ECHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHH GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN CCEEEEEEECCCCCCCCCCEEEEEECCCCHHHEHHHHHHHHHHHHHHHCCCCCEEHHHHC QDGVRNGYDLKQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN CCCCCCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH IGELKAYLATQGVEIRIC HHHHHHHHHCCCEEEEEC >Mature Secondary Structure MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV CCHHHCCCCCCCCCCCEEECEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCE VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF ECHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHH GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN CCEEEEEEECCCCCCCCCCEEEEEECCCCHHHEHHHHHHHHHHHHHHHCCCCCEEHHHHC QDGVRNGYDLKQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN CCCCCCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH IGELKAYLATQGVEIRIC HHHHHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Lyases; Carbon-Nitrogen Lyases; Amidine-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA