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The map label for this gene is intB [H]

Identifier: 91211217

GI number: 91211217

Start: 2114161

End: 2115432

Strand: Direct

Name: intB [H]

Synonym: UTI89_C2204

Alternate gene names: 91211217

Gene position: 2114161-2115432 (Clockwise)

Preceding gene: 91211212

Following gene: 91211236

Centisome position: 41.73

GC content: 51.34

Gene sequence:

>1272_bases
ATGTCCCTTAACGACGCAAAAATCCGTAGTCTCAAGCCCACTGATAAACCCTTTAAAGTCTCCGATTCCCACGGTCTGTA
TCTGCTGGTCAAACCAGGCGGTTCCCGTCTCTGGTATCTTAAATACCGTATTAATGGCAAAGAATCCCGTATTGCACTGG
GTGCCTACCCTGCCGTCTCCCTGTCTGACGCCCGCCAGCAGCGCGAAGGCATCCGTAAGATGCTGGCGCTGAACATCAAC
CCGGCGCAGCAACGTGCCGCTGAACGCGGCTCGCGCATGCAGGAGAAAATGTTTAAATCCGTGGCACTGGAGTGGCACAG
TAGCAAGAAAAAATGGTCGCAGAATACCGCAGATCGCGTGCTTGCCCGTCTGAACAGACATGTCTTTCCGACCATCGGGC
ATCTACCAGTTACCGAGCTTAAATCACGTCATTTCATTGAATTACTGAAAGGCATTGAGGAAAAGGGCTTGCTTGAAGTT
GCGTCCCGCTCGCGGCAACACCTCAGCAACATTATGCGTTATGCTGTTCATCAGGGGTTAATCGAAATCAACCCAGCTGC
AAATCTTGACGGCGTGACGGCTTCTCCCGCCAGACGACATTATCCCACCCTGCCACTGGAGCGCCTTCCTGAGCTGCTTG
AACGGATTGACAGTTATCACCAAGGACGGGAACTCACCAGGCTTGCAGTCCTGCTGACGTTGCATGTGTTCATTCGCTCA
AGTGAACTGCGCTATGCTCGTTGGACAGAGATTAACTTCAGAAATCGGATCTGGACGATACCTGCCACACGCGAAGCGAT
TGCAGGCGTACGTTATTCCAGTCGAGGTGCCAAAATGCGTACACCGCATATTGTGCCCCTTTCTGAGCAGGTTATCTCTA
TTCTGAAAAGGATTAAGGAAATATCTGGCGGGTATGAACTGGTGTTCCCCGGCTATCATGACCCCTACAAGCCGATGAGT
GAAAATACTATCAATAAGGCACTTCGCCAGATGGGATACAACACGAAACAAGATATCTGCGGTCATGGTTTCCGGGCAAT
GGCGTGTAGCGCGCTGATGGAATCCGGTTTATGGTCGCAAGATGCAGTGGAGCGTCAGATGAGTCACCAAGAGCGCAACA
CTGTGCGTCTGGCTTACATTCATAAGGCCGAACATATGGAAGCCCGCATGGACATGATGCAGTGGTGGTCGGATTATCTG
GATATGTGCAGTGAAATCTGGGTGCCCCCGTACATCTGGAGTCAGCAAAACATTAATCTCGCAGTAACCTGA

Upstream 100 bases:

>100_bases
GAAAACTCTTCCCGGTGCATTTTGATTTTACCCTCTGCATCGGGAAAAATTGGTGGTCAAATCTGGGGTCAGGTTAGTTC
GATAATGGAGTGACCCCCAT

Downstream 100 bases:

>100_bases
CTTATGAATAATCTTGTAAAGAACCAGGCCGTATCAGCAAACGCTGATACGGCTTTTCATCCACAGGCCGTTTTTCATCT
TCTAAGTCGTCCAGGACATC

Product: prophage P4 integrase

Products: NA

Alternate protein names: Int(P4) [H]

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MSLNDAKIRSLKPTDKPFKVSDSHGLYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNIN
PAQQRAAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHFIELLKGIEEKGLLEV
ASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTLPLERLPELLERIDSYHQGRELTRLAVLLTLHVFIRS
SELRYARWTEINFRNRIWTIPATREAIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMS
ENTINKALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEHMEARMDMMQWWSDYL
DMCSEIWVPPYIWSQQNINLAVT

Sequences:

>Translated_423_residues
MSLNDAKIRSLKPTDKPFKVSDSHGLYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNIN
PAQQRAAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHFIELLKGIEEKGLLEV
ASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTLPLERLPELLERIDSYHQGRELTRLAVLLTLHVFIRS
SELRYARWTEINFRNRIWTIPATREAIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMS
ENTINKALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEHMEARMDMMQWWSDYL
DMCSEIWVPPYIWSQQNINLAVT
>Mature_422_residues
SLNDAKIRSLKPTDKPFKVSDSHGLYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINP
AQQRAAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHFIELLKGIEEKGLLEVA
SRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTLPLERLPELLERIDSYHQGRELTRLAVLLTLHVFIRSS
ELRYARWTEINFRNRIWTIPATREAIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSE
NTINKALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEHMEARMDMMQWWSDYLD
MCSEIWVPPYIWSQQNINLAVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1788974, Length=403, Percent_Identity=33.7468982630273, Blast_Score=238, Evalue=6e-64,
Organism=Escherichia coli, GI1788690, Length=401, Percent_Identity=30.9226932668329, Blast_Score=229, Evalue=3e-61,
Organism=Escherichia coli, GI145693166, Length=407, Percent_Identity=33.4152334152334, Blast_Score=201, Evalue=7e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 48807; Mature: 48676

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNDAKIRSLKPTDKPFKVSDSHGLYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVS
CCCCCCHHCCCCCCCCCEEECCCCCEEEEEECCCCEEEEEEEEECCCCCEEEEECCCCCC
LSDARQQREGIRKMLALNINPAQQRAAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LARLNRHVFPTIGHLPVTELKSRHFIELLKGIEEKGLLEVASRSRQHLSNIMRYAVHQGL
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
IEINPAANLDGVTASPARRHYPTLPLERLPELLERIDSYHQGRELTRLAVLLTLHVFIRS
EEECCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
SELRYARWTEINFRNRIWTIPATREAIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKE
CCCCEEEEEEEECCCEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ISGGYELVFPGYHDPYKPMSENTINKALRQMGYNTKQDICGHGFRAMACSALMESGLWSQ
HCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHCCCCCH
DAVERQMSHQERNTVRLAYIHKAEHMEARMDMMQWWSDYLDMCSEIWVPPYIWSQQNINL
HHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEE
AVT
EEC
>Mature Secondary Structure 
SLNDAKIRSLKPTDKPFKVSDSHGLYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVS
CCCCCHHCCCCCCCCCEEECCCCCEEEEEECCCCEEEEEEEEECCCCCEEEEECCCCCC
LSDARQQREGIRKMLALNINPAQQRAAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LARLNRHVFPTIGHLPVTELKSRHFIELLKGIEEKGLLEVASRSRQHLSNIMRYAVHQGL
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
IEINPAANLDGVTASPARRHYPTLPLERLPELLERIDSYHQGRELTRLAVLLTLHVFIRS
EEECCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
SELRYARWTEINFRNRIWTIPATREAIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKE
CCCCEEEEEEEECCCEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ISGGYELVFPGYHDPYKPMSENTINKALRQMGYNTKQDICGHGFRAMACSALMESGLWSQ
HCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHCCCCCH
DAVERQMSHQERNTVRLAYIHKAEHMEARMDMMQWWSDYLDMCSEIWVPPYIWSQQNINL
HHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEE
AVT
EEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]