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The map label for this gene is nmpC [H]

Identifier: 91211151

GI number: 91211151

Start: 2035063

End: 2036091

Strand: Direct

Name: nmpC [H]

Synonym: UTI89_C2133

Alternate gene names: 91211151

Gene position: 2035063-2036091 (Clockwise)

Preceding gene: 91211150

Following gene: 91211156

Centisome position: 40.17

GC content: 44.41

Gene sequence:

>1029_bases
ATGTCTGCTCAGGCAGCAGAGATTTACAATAAAGACAGTAACAAGCTGGATCTGTACGGAAAAGTTAATGCTAAGCACTA
CTTCTCTTCTAACGATGCAGATGATGGCGACACAACTTATGTTCGTCTGGGCTTCAAAGGCGAAACTCAAATCAACGATC
AACTGACTGGTTTCGGTCAGTGGGAATATGAATTCAAAGGCAACCGTGCTGAATCTCAAGGTTCTTCCAAAGATAAAACC
CGTCTTGCCTTCGCTGGCCTGAAATTCGGTGACTACGGCTCCATCGATTATGGCCGTAACTACGGTGTAGCATACGATAT
CGGTGCATGGACCGACGTTCTGCCAGAATTCGGTGGCGATACCTGGACCCAAACAGATGTGTTCATGACTGGTCGCACCA
CAGGTGTTGCAACCTATCGTAACAACGACTTCTTTGGTCTGGTTGATGGTCTGAACTTTGCTGCTCAGTATCAGGGTAAA
AATGACCGCACTGACGTAACTGAAGCTAACGGTGATGGTTTCGGTTTCTCCACTACTTATGAGTATGAAGGATTCGGTGT
AGGTGCAACCTATGCTAAATCTGACCGCACTAATGATCAGGTTATCTACGGTAACAACAGCCTGAATGCATCTGGTCAAA
ATGCTGAAGTATGGGCAGCTGGTCTGAAATATGATGCGAACAACATCTATCTGGCTACCACCTATTCTGAAACCCAGAAC
ATGACTGTTTTTGGTAATAACCATATTGCCAACAAAGCACAAAACTTCGAAGTAGTTGCACAATATCAGTTCGACTTCGG
TCTGCGTCCGTCCGTTGCTTACCTGCAATCTAAAGGAAAAGACTTGGGTGCGTGGGGTGATCAGGACCTGGTTGAATATA
TTGATGTAGGTGCAACCTATTACTTCAACAAAAATATGTCCACTTTTGTTGATTACAAAATCAACCTGATTGATAAGAGC
GATTTCACGAAAGCATCTGGCGTTGCTACCGATGATATCGTTGCTGTAGGATTGGTTTACCAGTTCTAA

Upstream 100 bases:

>100_bases
GCAGTGACATCATTTTTAAATAATAGTTCAAATAAAAGGGCTCACGATGAAAAAATTAACAGTGGCAATTTCTGCTGTAG
CTGCATCAGTACTGATGGCG

Downstream 100 bases:

>100_bases
TCTGATTACTCAAAGATATGTTGTGGGAGGCTTTGCCTCCCCAACATATAAGTGGCCCCCTCAAGCCACTTTCCTTAGAA
GCACTATCTTGCTTCTGACT

Product: outer membrane porin protein NmpC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYVRLGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKT
RLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNNDFFGLVDGLNFAAQYQGK
NDRTDVTEANGDGFGFSTTYEYEGFGVGATYAKSDRTNDQVIYGNNSLNASGQNAEVWAAGLKYDANNIYLATTYSETQN
MTVFGNNHIANKAQNFEVVAQYQFDFGLRPSVAYLQSKGKDLGAWGDQDLVEYIDVGATYYFNKNMSTFVDYKINLIDKS
DFTKASGVATDDIVAVGLVYQF

Sequences:

>Translated_342_residues
MSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYVRLGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKT
RLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNNDFFGLVDGLNFAAQYQGK
NDRTDVTEANGDGFGFSTTYEYEGFGVGATYAKSDRTNDQVIYGNNSLNASGQNAEVWAAGLKYDANNIYLATTYSETQN
MTVFGNNHIANKAQNFEVVAQYQFDFGLRPSVAYLQSKGKDLGAWGDQDLVEYIDVGATYYFNKNMSTFVDYKINLIDKS
DFTKASGVATDDIVAVGLVYQF
>Mature_341_residues
SAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYVRLGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTR
LAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNNDFFGLVDGLNFAAQYQGKN
DRTDVTEANGDGFGFSTTYEYEGFGVGATYAKSDRTNDQVIYGNNSLNASGQNAEVWAAGLKYDANNIYLATTYSETQNM
TVFGNNHIANKAQNFEVVAQYQFDFGLRPSVAYLQSKGKDLGAWGDQDLVEYIDVGATYYFNKNMSTFVDYKINLIDKSD
FTKASGVATDDIVAVGLVYQF

Specific function: Unknown

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein. Note=When expressed in mutant CS384 [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Gram-negative porin family [H]

Homologues:

Organism=Escherichia coli, GI1787641, Length=360, Percent_Identity=65.2777777777778, Blast_Score=442, Evalue=1e-125,
Organism=Escherichia coli, GI1786436, Length=343, Percent_Identity=63.8483965014577, Blast_Score=426, Evalue=1e-120,
Organism=Escherichia coli, GI1788544, Length=356, Percent_Identity=62.3595505617977, Blast_Score=417, Evalue=1e-118,
Organism=Escherichia coli, GI1787160, Length=352, Percent_Identity=59.9431818181818, Blast_Score=387, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001897
- InterPro:   IPR013793
- InterPro:   IPR001702 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37852; Mature: 37721

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS00576 GRAM_NEG_PORIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYVRLGFKGETQINDQLTGFGQ
CCCCCCHHHCCCCCEEEEEEEECCEEEECCCCCCCCCEEEEEEEECCCCEECCCCCCCCE
WEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGD
EEEEECCCCCCCCCCCCCCEEEEEEECEECCCCCCCCCCCCCEEEECCCHHHHHHHHCCC
TWTQTDVFMTGRTTGVATYRNNDFFGLVDGLNFAAQYQGKNDRTDVTEANGDGFGFSTTY
CCCEEEEEEECCCEEEEEEECCCEEEEECCCCEEEEECCCCCCCCCEECCCCCCCCEEEE
EYEGFGVGATYAKSDRTNDQVIYGNNSLNASGQNAEVWAAGLKYDANNIYLATTYSETQN
EECCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCC
MTVFGNNHIANKAQNFEVVAQYQFDFGLRPSVAYLQSKGKDLGAWGDQDLVEYIDVGATY
EEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCEEE
YFNKNMSTFVDYKINLIDKSDFTKASGVATDDIVAVGLVYQF
EECCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure 
SAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYVRLGFKGETQINDQLTGFGQ
CCCCCHHHCCCCCEEEEEEEECCEEEECCCCCCCCCEEEEEEEECCCCEECCCCCCCCE
WEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGD
EEEEECCCCCCCCCCCCCCEEEEEEECEECCCCCCCCCCCCCEEEECCCHHHHHHHHCCC
TWTQTDVFMTGRTTGVATYRNNDFFGLVDGLNFAAQYQGKNDRTDVTEANGDGFGFSTTY
CCCEEEEEEECCCEEEEEEECCCEEEEECCCCEEEEECCCCCCCCCEECCCCCCCCEEEE
EYEGFGVGATYAKSDRTNDQVIYGNNSLNASGQNAEVWAAGLKYDANNIYLATTYSETQN
EECCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCC
MTVFGNNHIANKAQNFEVVAQYQFDFGLRPSVAYLQSKGKDLGAWGDQDLVEYIDVGATY
EEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCEEE
YFNKNMSTFVDYKINLIDKSDFTKASGVATDDIVAVGLVYQF
EECCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3017988; 9278503; 8057841; 8648624 [H]