| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is argS [H]
Identifier: 91211101
GI number: 91211101
Start: 1986696
End: 1988429
Strand: Direct
Name: argS [H]
Synonym: UTI89_C2080
Alternate gene names: 91211101
Gene position: 1986696-1988429 (Clockwise)
Preceding gene: 91211096
Following gene: 91211105
Centisome position: 39.22
GC content: 53.06
Gene sequence:
>1734_bases GTGAATATTCAGGCTCTTCTCTCAGAAAAAGTCCGTCAGGCCATGATTGCGGCAGGCGCGCCTGCGGATTGCGAACCGCA GGTTCGTCAGTCAGCAAAAGTTCAGTTCGGCAACTATCAGGCTAACGGCATGATGGCAGTTGCTAAAAAACTGGGTATGG CACCGCGACAATTAGCAGAGCAGGTGCTGACTCATCTGGATCTTAACGGTATCGCCAGCAAAGTTGAGATCGCCGGTCCA GGCTTTATCAACATTTTCCTTGATCCGGCATTCCTGGCTGAACATGTTCAGCAGGCGCTGGCGTCCGATCGTCTCGGTGT TGCTATGCCAGAAAAACAAACCATTGTGGTTGACTACTCTGCGCCAAACGTGGCGAAAGAGATGCATGTCGGTCACCTGC GCTCTACCATTATTGGTGACGCAGCAGTGCGTACTCTGGAGTTCCTCGGTCACAAAGTGATTCGCGCAAACCACGTCGGC GACTGGGGCACTCAGTTCGGTATGCTGATTGCATGGCTGGAAAAGCAGCAGCAAGAAAACGCCGGTGAAATGGAGCTGGC TGACCTTGAAGGTTTCTACCGCGATGCGAAAAAGCATTACGACGAGGATGAAGAGTTTGCCGAGCGTGCACGTAACTACG TGGTAAAACTGCAAAGCGGTGACGAATATTTCCGCGAGATGTGGCGCAAACTGGTCGACATCACCATGACGCAGAACCAG ATCACCTACGATCGTCTGAACGTGACGTTGACCCGCGATGACGTCATGGGTGAAAGTCTCTACAACCCAATGCTGCCGGG TATCGTGGCGGACCTGAAAGCCAAAGGTCTGGCAGTAGAAAGTGAAGGCGCGACCGTTGTATTCCTTGATGAGTTCAAAA ACAAGGAAGGCGAACCGATGGGCGTTATCATTCAGAAGAAAGATGGCGGCTATCTCTACACCACCACTGATATCGCCTGT GCGAAATATCGTTATGAAACACTGCATGCCGATCGCGTGCTGTATTACATCGACTCCCGTCAGCATCAACACCTGATGCA GGCGTGGGCTATCGTCCGCAAAGCAGGCTATGTACCGGAATCCGTACCGCTGGAACACCACATGTTCGGCATGATGCTGG GTAAAGACGGCAAACCGTTCAAAACCCGCGCGGGTGGTACAGTGAAACTGGCCGATCTGCTGGATGAAGCCCTGGAGCGT GCACGCCGTCTGGTGGCAGAAAAGAACCCGGATATGCCAGCCGACGAGCTGGAAAAACTGGCTAACGCGGTTGGTATTGG TGCGGTGAAATATGCGGATCTCTCCAAAAACCGCACCACGGACTACATCTTCGACTGGGACAACATGCTGGCGTTTGAGG GTAATACCGCGCCATACATGCAGTATGCTTACACGCGTGTATTATCCGTGTTCCGTAAAGCAGAAATTGACGAAGAGCAA CTGGCTGCAGCTCCGGTAATCATCCGTGAAGATCGTGAAGCGCAACTGGCAGCTCGCCTGCTGCAGTTTGAAGAAACCCT CACTGTGGTTGCCCGTGAAGGCACGCCGCATGTGATGTGTGCTTACCTGTACGATCTGGCCGGTCTGTTCTCTGGCTTCT ACGAGCACTGCCCGATCCTCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTGAAACTGGCACAACTGACGGCGAAG ACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACAGTAGAGCGTATGTAA
Upstream 100 bases:
>100_bases ACGTTGCTGACGAAAACAGCCATTTGCAGTATACTCCCGCCCTAATTTCTTTAACTGGTGCGGGCAATTTTTGCTCGCTT CATCAATGTAAGGTATTCCG
Downstream 100 bases:
>100_bases TCGCGTTATACGGCAACAGCCGATGTCATTGCAGACATCGGCTTTTTTATCATTAACGATAATTTACAATCACTTCATTC CGTTGAATCTTTAGCGGCGG
Product: arginyl-tRNA synthetase
Products: NA
Alternate protein names: Arginine--tRNA ligase; ArgRS [H]
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MNIQALLSEKVRQAMIAAGAPADCEPQVRQSAKVQFGNYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGP GFINIFLDPAFLAEHVQQALASDRLGVAMPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVG DWGTQFGMLIAWLEKQQQENAGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQ ITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIAC AKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALER ARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQ LAAAPVIIREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENEEVRNSRLKLAQLTAK TLKLGLDTLGIETVERM
Sequences:
>Translated_577_residues MNIQALLSEKVRQAMIAAGAPADCEPQVRQSAKVQFGNYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGP GFINIFLDPAFLAEHVQQALASDRLGVAMPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVG DWGTQFGMLIAWLEKQQQENAGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQ ITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIAC AKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALER ARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQ LAAAPVIIREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENEEVRNSRLKLAQLTAK TLKLGLDTLGIETVERM >Mature_577_residues MNIQALLSEKVRQAMIAAGAPADCEPQVRQSAKVQFGNYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGP GFINIFLDPAFLAEHVQQALASDRLGVAMPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVG DWGTQFGMLIAWLEKQQQENAGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQ ITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIAC AKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALER ARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQ LAAAPVIIREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENEEVRNSRLKLAQLTAK TLKLGLDTLGIETVERM
Specific function: Unknown
COG id: COG0018
COG function: function code J; Arginyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI15149476, Length=599, Percent_Identity=38.5642737896494, Blast_Score=396, Evalue=1e-110, Organism=Homo sapiens, GI197100773, Length=537, Percent_Identity=29.2364990689013, Blast_Score=199, Evalue=6e-51, Organism=Escherichia coli, GI1788184, Length=577, Percent_Identity=99.6533795493934, Blast_Score=1191, Evalue=0.0, Organism=Caenorhabditis elegans, GI71985061, Length=602, Percent_Identity=37.5415282392027, Blast_Score=374, Evalue=1e-104, Organism=Caenorhabditis elegans, GI71985068, Length=566, Percent_Identity=38.1625441696113, Blast_Score=364, Evalue=1e-101, Organism=Caenorhabditis elegans, GI17532153, Length=384, Percent_Identity=27.6041666666667, Blast_Score=147, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6320548, Length=544, Percent_Identity=34.375, Blast_Score=259, Evalue=7e-70, Organism=Saccharomyces cerevisiae, GI6321883, Length=538, Percent_Identity=28.8104089219331, Blast_Score=213, Evalue=8e-56, Organism=Drosophila melanogaster, GI18859963, Length=600, Percent_Identity=37.6666666666667, Blast_Score=389, Evalue=1e-108, Organism=Drosophila melanogaster, GI28571570, Length=478, Percent_Identity=29.2887029288703, Blast_Score=171, Evalue=2e-42,
Paralogues:
None
Copy number: 789 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR001278 - InterPro: IPR015945 - InterPro: IPR005148 - InterPro: IPR008909 - InterPro: IPR014729 - InterPro: IPR009080 [H]
Pfam domain/function: PF03485 Arg_tRNA_synt_N; PF05746 DALR_1; PF00750 tRNA-synt_1d [H]
EC number: =6.1.1.19 [H]
Molecular weight: Translated: 64713; Mature: 64713
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIQALLSEKVRQAMIAAGAPADCEPQVRQSAKVQFGNYQANGMMAVAKKLGMAPRQLAE CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEECCEECCCHHHHHHHHCCCHHHHHH QVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVAMPEKQTIVVDYS HHHHHCCCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC APNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQEN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCC AGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQ CCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHEEECCCE ITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPM EEEEEEEEEEECCHHHHHHHHCCCCCHHHHHHHHCCEEEECCCCEEEEEECCCCCCCCCE GVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPE EEEEEECCCCEEEEECCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCC SVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKL CCCHHHHHHHHHCCCCCCCCEECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH ANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQ HHHHCCCCEEEECCCCCCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHH LAAAPVIIREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPIL HHHCCEEEECCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC SAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC >Mature Secondary Structure MNIQALLSEKVRQAMIAAGAPADCEPQVRQSAKVQFGNYQANGMMAVAKKLGMAPRQLAE CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEECCEECCCHHHHHHHHCCCHHHHHH QVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVAMPEKQTIVVDYS HHHHHCCCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC APNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQEN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCC AGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQ CCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHEEECCCE ITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPM EEEEEEEEEEECCHHHHHHHHCCCCCHHHHHHHHCCEEEECCCCEEEEEECCCCCCCCCE GVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPE EEEEEECCCCEEEEECCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCC SVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKL CCCHHHHHHHHHCCCCCCCCEECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH ANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQ HHHHCCCCEEEECCCCCCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHH LAAAPVIIREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPIL HHHCCEEEECCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC SAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA