| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yebQ [H]
Identifier: 91211050
GI number: 91211050
Start: 1936855
End: 1938339
Strand: Direct
Name: yebQ [H]
Synonym: UTI89_C2029
Alternate gene names: 91211050
Gene position: 1936855-1938339 (Clockwise)
Preceding gene: 91211048
Following gene: 91211055
Centisome position: 38.23
GC content: 51.04
Gene sequence:
>1485_bases GTGGTCGCAATCCATCTTTTGCCGGTTAGTTACAATTCTGCGACATCCACCGTGAATATCAGTGCTAGAATCATACCCCT GTTGATTATTCACCAAAGATATAAAATTCCTATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCTGCGATACGGTG CGATATTAACCATTGTGATTGGTATTTCGATGGCTGTCCTTGACGGCGCAATCGCCAACGTCGCCTTGCCAACAATCGCT ACGGACCTTCATGCCACGCCGGCCAGTTCCATCTGGGTAGTGAACGCCTATCAAATCGCCATTGTCATCTCCCTGCTCTC GTTTTCGTTTCTGGGCGATATGTTTGGCTATCGACGTATTTATAAATGCGGTCTGGTCGTTTTTCTGTTGTCTTCACTGT TCTGCGCCCTTTCTGATTCGCTGCAAATGCTCACCCTTGCGCGTGTCATACAAGGTTTCGGCGGTGCAGCGTTGATGAGC GTTAATACCGCACTTATCCGCCTGATCTATCCACAACGTTTTCTGGGTAGAGGGATGGGCATAAACTCGTTTATTGTTGC CGTCTCTTCTGCTGCCGGGCCGACAATTGCTGCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACG TACCGTTGGGAATTATCGCCCTGCTTCTGGCAATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTC GACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCTGCTTATCACTGCGTTGAGTGGTTTCGCTCAGGGGCAATC GCTGACATTGATTGGTGCGGAACTGGTGGTAATGGTTGTCGTTGGTATTTTCTTTATTCGCCGCCAGCTTTCTCTTCCCG TACCGCTGCTACCGGTGGATTTACTGCGTATCCCGCTGTTTTCACTTTCTATTTGCACATCTGTTTGCTCTTTCTGCGCA CAAATGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCT GACACCGTGGCCGTTAGCAACGATGGTGATGGCTCCACTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTGG GTGCTTTAGGGTTATTCATCATGGCTGCGGGGCTTTTTTCCCTGGTTCTGCTGCCAGCGTCACCTGCGGATATCAATATT ATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTGTTCCAGTCACCCAATAACCACACCATTATTACCTCCGCTCC TCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGGACGGCTCGTCTTCTGGGTCAGAGTAGCGGCGCGGCTCTGGTAG CGCTGATGCTAAATCAGTTTGGTGATAATGGTACGCACGTCTCGCTGATAGCTGCGGCTATTCTGGCAGTGATTGCTGCC TGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAA
Upstream 100 bases:
>100_bases GAATCAGGCTGTTTATCCAGATCTGCGTTAGCCATTTATCACCTCATTGCGAGTGTTTTATAAAAATCAGAACTGTTTTT TATTATAATTTCGCACCTGG
Downstream 100 bases:
>100_bases AAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAA TACGTTTATCCAGCGGCGGG
Product: transport protein YebQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MVAIHLLPVSYNSATSTVNISARIIPLLIIHQRYKIPMPKVQADGLPLPLRYGAILTIVIGISMAVLDGAIANVALPTIA TDLHATPASSIWVVNAYQIAIVISLLSFSFLGDMFGYRRIYKCGLVVFLLSSLFCALSDSLQMLTLARVIQGFGGAALMS VNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIAAAILSIASWKWLFLINVPLGIIALLLAMRFLPPNGSRASKPRF DLPSAVMNALTFGLLITALSGFAQGQSLTLIGAELVVMVVVGIFFIRRQLSLPVPLLPVDLLRIPLFSLSICTSVCSFCA QMLAMVSLPFYLQTVLGRSEVETGLLLTPWPLATMVMAPLAGYLIERVHAGLLGALGLFIMAAGLFSLVLLPASPADINI IWPMILCGAGFGLFQSPNNHTIITSAPRERSGGASGMLGTARLLGQSSGAALVALMLNQFGDNGTHVSLIAAAILAVIAA CVSGLRITQPRSRA
Sequences:
>Translated_494_residues MVAIHLLPVSYNSATSTVNISARIIPLLIIHQRYKIPMPKVQADGLPLPLRYGAILTIVIGISMAVLDGAIANVALPTIA TDLHATPASSIWVVNAYQIAIVISLLSFSFLGDMFGYRRIYKCGLVVFLLSSLFCALSDSLQMLTLARVIQGFGGAALMS VNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIAAAILSIASWKWLFLINVPLGIIALLLAMRFLPPNGSRASKPRF DLPSAVMNALTFGLLITALSGFAQGQSLTLIGAELVVMVVVGIFFIRRQLSLPVPLLPVDLLRIPLFSLSICTSVCSFCA QMLAMVSLPFYLQTVLGRSEVETGLLLTPWPLATMVMAPLAGYLIERVHAGLLGALGLFIMAAGLFSLVLLPASPADINI IWPMILCGAGFGLFQSPNNHTIITSAPRERSGGASGMLGTARLLGQSSGAALVALMLNQFGDNGTHVSLIAAAILAVIAA CVSGLRITQPRSRA >Mature_494_residues MVAIHLLPVSYNSATSTVNISARIIPLLIIHQRYKIPMPKVQADGLPLPLRYGAILTIVIGISMAVLDGAIANVALPTIA TDLHATPASSIWVVNAYQIAIVISLLSFSFLGDMFGYRRIYKCGLVVFLLSSLFCALSDSLQMLTLARVIQGFGGAALMS VNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIAAAILSIASWKWLFLINVPLGIIALLLAMRFLPPNGSRASKPRF DLPSAVMNALTFGLLITALSGFAQGQSLTLIGAELVVMVVVGIFFIRRQLSLPVPLLPVDLLRIPLFSLSICTSVCSFCA QMLAMVSLPFYLQTVLGRSEVETGLLLTPWPLATMVMAPLAGYLIERVHAGLLGALGLFIMAAGLFSLVLLPASPADINI IWPMILCGAGFGLFQSPNNHTIITSAPRERSGGASGMLGTARLLGQSSGAALVALMLNQFGDNGTHVSLIAAAILAVIAA CVSGLRITQPRSRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=457, Percent_Identity=99.3435448577681, Blast_Score=887, Evalue=0.0, Organism=Escherichia coli, GI1790195, Length=440, Percent_Identity=28.1818181818182, Blast_Score=126, Evalue=4e-30, Organism=Escherichia coli, GI1788710, Length=439, Percent_Identity=26.4236902050114, Blast_Score=116, Evalue=3e-27, Organism=Escherichia coli, GI1789042, Length=425, Percent_Identity=27.0588235294118, Blast_Score=116, Evalue=3e-27, Organism=Escherichia coli, GI1788392, Length=429, Percent_Identity=28.9044289044289, Blast_Score=116, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6325455, Length=167, Percent_Identity=28.1437125748503, Blast_Score=68, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 52231; Mature: 52231
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAIHLLPVSYNSATSTVNISARIIPLLIIHQRYKIPMPKVQADGLPLPLRYGAILTIVI CEEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH GISMAVLDGAIANVALPTIATDLHATPASSIWVVNAYQIAIVISLLSFSFLGDMFGYRRI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH YKCGLVVFLLSSLFCALSDSLQMLTLARVIQGFGGAALMSVNTALIRLIYPQRFLGRGMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC INSFIVAVSSAAGPTIAAAILSIASWKWLFLINVPLGIIALLLAMRFLPPNGSRASKPRF CCHHHHEEECCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCC DLPSAVMNALTFGLLITALSGFAQGQSLTLIGAELVVMVVVGIFFIRRQLSLPVPLLPVD CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH LLRIPLFSLSICTSVCSFCAQMLAMVSLPFYLQTVLGRSEVETGLLLTPWPLATMVMAPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCEEECCHHHHHHHHHHH AGYLIERVHAGLLGALGLFIMAAGLFSLVLLPASPADINIIWPMILCGAGFGLFQSPNNH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC TIITSAPRERSGGASGMLGTARLLGQSSGAALVALMLNQFGDNGTHVSLIAAAILAVIAA EEEECCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH CVSGLRITQPRSRA HHCCCEECCCCCCC >Mature Secondary Structure MVAIHLLPVSYNSATSTVNISARIIPLLIIHQRYKIPMPKVQADGLPLPLRYGAILTIVI CEEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH GISMAVLDGAIANVALPTIATDLHATPASSIWVVNAYQIAIVISLLSFSFLGDMFGYRRI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH YKCGLVVFLLSSLFCALSDSLQMLTLARVIQGFGGAALMSVNTALIRLIYPQRFLGRGMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC INSFIVAVSSAAGPTIAAAILSIASWKWLFLINVPLGIIALLLAMRFLPPNGSRASKPRF CCHHHHEEECCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCC DLPSAVMNALTFGLLITALSGFAQGQSLTLIGAELVVMVVVGIFFIRRQLSLPVPLLPVD CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH LLRIPLFSLSICTSVCSFCAQMLAMVSLPFYLQTVLGRSEVETGLLLTPWPLATMVMAPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCEEECCHHHHHHHHHHH AGYLIERVHAGLLGALGLFIMAAGLFSLVLLPASPADINIIWPMILCGAGFGLFQSPNNH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC TIITSAPRERSGGASGMLGTARLLGQSSGAALVALMLNQFGDNGTHVSLIAAAILAVIAA EEEECCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH CVSGLRITQPRSRA HHCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]