Click here to switch to the map view.

The map label for this gene is ydjN [H]

Identifier: 91210944

GI number: 91210944

Start: 1845649

End: 1847040

Strand: Direct

Name: ydjN [H]

Synonym: UTI89_C1923

Alternate gene names: 91210944

Gene position: 1845649-1847040 (Clockwise)

Preceding gene: 162138431

Following gene: 91210946

Centisome position: 36.43

GC content: 52.8

Gene sequence:

>1392_bases
ATGAACTTTCCATTAATTGCGAACATCGTGGTGTTCGTTGTACTGCTGTTTGCGCTGGCTCAAACCCGCCACAAACAGTG
GAGTCTGGCGAAAAAAGTGCTGGTGGGTCTTGTGATGGGTGTGGTTTTTGGCCTTGCCCTGCATACCATTTATGGTTCTG
ACAGCCAGGTACTTAAAGATTCTGTACAGTGGTTTAACATTGTTGGTAACGGCTATGTTCAACTGCTGCAAATGATCGTT
ATGCCGCTAGTCTTCGCCTCTATTCTGAGCGCGGTTGCCCGTCTGCATAACGCATCTCAGTTAGGCAAAATCAGTTTTCT
AACCATCGGTACGCTTTTGTTTACCACGCTGATTGCAGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGG
CTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATCGAAAGTAACTATGTTGGTAAAGTCTCTGAC
CTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTGACCGGAGCCAATCCGACGTCAAT
TATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCGCTGAAGCTGCTGAAGGATGATGCGCCGAAAGGTGAAC
GCGTCTTAACCGCTATCGATACCCTGCAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGT
GTTCTGGCGCTGATGACCAAAGTGGTTGCAGGTTCTAACCTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTTGCGTC
CTACCTCGGTCTGCTGATTATGTTTGCAGTGCATGGCCTTCTGCTGGGCATTAATGGCGTGAGCCCGCTGAAGTACTTCC
GTAAGGTATGGCCAGTACTGACGTTTGCCTTTACCAGCCGTTCCAGTGCTGCGTCTATCCCACTGAATGTGGAAGCACAA
ACGCGTCGTCTGGGTGTTCCTGAATCCATCGCCAGTTTCGCCGCCTCTTTCGGTGCGACCATTGGTCAGAACGGTTGTGC
CGGTTTGTATCCGGCAATGCTGGCGGTGATGGTTGCGCCTACGGTGGGCATTAACCCACTGGACCCGATGTGGATTGCGA
CGCTGGTCGGTATTGTCACCGTTAGTTCCGCAGGCGTTGCCGGTGTCGGTGGTGGTGCAACTTTCGCCGCACTGATTGTG
CTGCCTGCGATGGGCCTGCCGGTAACGCTGCTGGCATTGTTAATCTCCGTTGAACCGCTTATCGACATGGGTCGTACGGC
GCTAAACGTTAGTGGCTCAATGACCGCTGGCACGCTGACCAGCCAGTGGCTGAAGCAAACCGATAAAGCCATTCTGGATA
GCGAAGACGACGCCGAACTGGCACACCGTTAA

Upstream 100 bases:

>100_bases
TTCCATTTGAATATAAGAGCCAGCTCACAGTTCTGTTAATCTTGCGCCAACACTATGACTGCTACGCAGTGATAGAAATA
ATAAGATCAGGAGAACGGGG

Downstream 100 bases:

>100_bases
TTCTGATTTGTTACGTTAAACGCCTGTCATCCCGACAGGTGTTTTTTTATTCTTCGACCTCATTTTCCTGACGAATCTGA
TTTGCCCAACGCTGGGCGGA

Product: symporter protein YdjN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIV
MPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSD
LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLTAIDTLQSWVMKLVRLVMQLTPYG
VLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFAVHGLLLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQ
TRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIV
LPAMGLPVTLLALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKAILDSEDDAELAHR

Sequences:

>Translated_463_residues
MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIV
MPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSD
LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLTAIDTLQSWVMKLVRLVMQLTPYG
VLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFAVHGLLLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQ
TRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIV
LPAMGLPVTLLALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKAILDSEDDAELAHR
>Mature_463_residues
MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIV
MPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSD
LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLTAIDTLQSWVMKLVRLVMQLTPYG
VLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFAVHGLLLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQ
TRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIV
LPAMGLPVTLLALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKAILDSEDDAELAHR

Specific function: Unknown

COG id: COG1823

COG function: function code R; Predicted Na+/dicarboxylate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]

Homologues:

Organism=Homo sapiens, GI223468564, Length=287, Percent_Identity=31.0104529616725, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI223468566, Length=287, Percent_Identity=31.0104529616725, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI5032093, Length=286, Percent_Identity=30.7692307692308, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI194239697, Length=468, Percent_Identity=23.7179487179487, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI21314632, Length=441, Percent_Identity=28.7981859410431, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI40254478, Length=512, Percent_Identity=26.3671875, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI4827012, Length=304, Percent_Identity=28.6184210526316, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI66773030, Length=374, Percent_Identity=27.0053475935829, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI169790839, Length=465, Percent_Identity=25.3763440860215, Blast_Score=79, Evalue=1e-14,
Organism=Escherichia coli, GI1788024, Length=463, Percent_Identity=99.1360691144708, Blast_Score=906, Evalue=0.0,
Organism=Escherichia coli, GI1790514, Length=440, Percent_Identity=27.0454545454545, Blast_Score=130, Evalue=3e-31,
Organism=Escherichia coli, GI1789947, Length=436, Percent_Identity=22.9357798165138, Blast_Score=115, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI71983099, Length=442, Percent_Identity=25.7918552036199, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71983106, Length=442, Percent_Identity=25.7918552036199, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI193206654, Length=488, Percent_Identity=25.2049180327869, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17541374, Length=445, Percent_Identity=25.1685393258427, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI193206505, Length=481, Percent_Identity=24.1164241164241, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71996953, Length=467, Percent_Identity=25.2676659528908, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17537407, Length=449, Percent_Identity=24.4988864142539, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24583025, Length=462, Percent_Identity=24.6753246753247, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI17137668, Length=462, Percent_Identity=24.6753246753247, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24583023, Length=462, Percent_Identity=24.6753246753247, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991 [H]

Pfam domain/function: PF00375 SDF [H]

EC number: NA

Molecular weight: Translated: 48725; Mature: 48725

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCC
>Mature Secondary Structure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HHCCCHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]