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The map label for this gene is ydhJ [H]

Identifier: 91210858

GI number: 91210858

Start: 1761383

End: 1762282

Strand: Direct

Name: ydhJ [H]

Synonym: UTI89_C1835

Alternate gene names: 91210858

Gene position: 1761383-1762282 (Clockwise)

Preceding gene: 91210857

Following gene: 91210859

Centisome position: 34.77

GC content: 50.78

Gene sequence:

>900_bases
TTGCGTTTGCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCAT
TGTAGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAA
TACGCGCAGAACAGGTTTCTATCACCCCACAGGTGTCGGGACGTATTATTGAGCTGAATATAAAAGACAACCAGCTGGTT
AACGCGGGGGATCTTCTGCTCACGATCGATAAAACGCCCTTTCAGATCGCCGAGCTGAACGCACAGGCTCAGCTGGCGAA
AGCGCAATCTGGCCTCGCAAAAGCCAATAACGAAGCGAATCGTCGTCGTCATCTCTCACAAAATTTTATTTCTGCCGAAG
AACTCGATACCGCTAACCTCAATGTTAAAGCGATGCAGGCCAGCGTTGATGCCGCACAGGCGACGCTGAAACAGGCACAA
TGGCAACTGGCGCAAACGGAAATTCGCGCCCCGGTGAGTGGATGGGTGACTAATCTCACTACCCGCATCGGCGACTACGC
TGACACCGGGAAACCGCTGTTTGCCCTTGTCGACAGCCACTCGTTTTACGTCATTGGTTATTTTGAAGAAACCAAGTTGC
GCCATATCCGCGAAGGTGCACCAGCACAAATTACCCTCTATAGTGATAACAAAACGTTACAGGGTCACGTGTCCAGTATC
GGTCGGGCGATTTATGATCAGAGCGTTGAAAGTGACTCAAGCCTTATTCCGGATGTGAAACCTAACGTCCCCTGGGTTCG
CCTCGCCCAACGCGTTCCCGTCCGCTTTACGCTGGATAAAGTCCCAGGCGATGTCACGCTGGTGTCGGGCACCACCTGTA
GCATTGCCGTAGGTCAATAA

Upstream 100 bases:

>100_bases
GATTCGTCATCTGGCTTGTCATACACCGCCTGCTTCGAGGCTGGATCTACGCCGGTGACATCTGGCATCCCTTGTTAATG
GATTTATCGCTGTTTGCGAT

Downstream 100 bases:

>100_bases
TGAACGCATCGTCATGGTCCTTGCGCAATTTGCCCTGGTTCAGGGCCACGCTGGCGCAATGGCGTTATGCGTTACGCAAT
ACCATTGCCATGTGTCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MRLPCSGNTDCVVTMSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQSPWTRDGKIRAEQVSITPQVSGRIIELNIKDNQLV
NAGDLLLTIDKTPFQIAELNAQAQLAKAQSGLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQ
WQLAQTEIRAPVSGWVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKTLQGHVSSI
GRAIYDQSVESDSSLIPDVKPNVPWVRLAQRVPVRFTLDKVPGDVTLVSGTTCSIAVGQ

Sequences:

>Translated_299_residues
MRLPCSGNTDCVVTMSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQSPWTRDGKIRAEQVSITPQVSGRIIELNIKDNQLV
NAGDLLLTIDKTPFQIAELNAQAQLAKAQSGLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQ
WQLAQTEIRAPVSGWVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKTLQGHVSSI
GRAIYDQSVESDSSLIPDVKPNVPWVRLAQRVPVRFTLDKVPGDVTLVSGTTCSIAVGQ
>Mature_299_residues
MRLPCSGNTDCVVTMSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQSPWTRDGKIRAEQVSITPQVSGRIIELNIKDNQLV
NAGDLLLTIDKTPFQIAELNAQAQLAKAQSGLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQ
WQLAQTEIRAPVSGWVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKTLQGHVSSI
GRAIYDQSVESDSSLIPDVKPNVPWVRLAQRVPVRFTLDKVPGDVTLVSGTTCSIAVGQ

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=285, Percent_Identity=98.9473684210526, Blast_Score=580, Evalue=1e-167,
Organism=Escherichia coli, GI1789637, Length=282, Percent_Identity=40.7801418439716, Blast_Score=202, Evalue=3e-53,
Organism=Escherichia coli, GI1790519, Length=293, Percent_Identity=33.1058020477816, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1788711, Length=311, Percent_Identity=27.9742765273312, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1789041, Length=304, Percent_Identity=27.3026315789474, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87082036, Length=136, Percent_Identity=35.2941176470588, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790024, Length=254, Percent_Identity=24.4094488188976, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1790012, Length=269, Percent_Identity=23.7918215613383, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI1789929, Length=130, Percent_Identity=36.1538461538462, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 32960; Mature: 32960

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPCSGNTDCVVTMSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQSPWTRDGKIRAEQVS
CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
ITPQVSGRIIELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSGLAKANNEAN
ECCCCCCEEEEEEECCCCEECCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCHHH
RRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLT
HHHHHHHHCCCHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKTLQGHVSSI
HHHCCCCCCCCCEEEEEECCCEEEEEEECHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH
GRAIYDQSVESDSSLIPDVKPNVPWVRLAQRVPVRFTLDKVPGDVTLVSGTTCSIAVGQ
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCEEEEECCEEEEEECC
>Mature Secondary Structure
MRLPCSGNTDCVVTMSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQSPWTRDGKIRAEQVS
CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
ITPQVSGRIIELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSGLAKANNEAN
ECCCCCCEEEEEEECCCCEECCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCHHH
RRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLT
HHHHHHHHCCCHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKTLQGHVSSI
HHHCCCCCCCCCEEEEEECCCEEEEEEECHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH
GRAIYDQSVESDSSLIPDVKPNVPWVRLAQRVPVRFTLDKVPGDVTLVSGTTCSIAVGQ
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCEEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]